Gcaud8013.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8013.t1
Unique NameGcaud8013.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length184
Homology
BLAST of Gcaud8013.t1 vs. uniprot
Match: A0A2V3IC35_9FLOR (Guanine deaminase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC35_9FLOR)

HSP 1 Score: 248 bits (632), Expect = 1.440e-81
Identity = 114/155 (73.55%), Postives = 136/155 (87.74%), Query Frame = 0
Query:   29 ELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALEERKASLY 183
            +L+KMAIDEG +GV +G+GGPFGAVITQ+G VIARGHNRV ++ DPTAHAE+ AIRDAC+KLGRFSL DCVLYSSCEPCPMCFSAIHWA+IP CFY+ TADDAA VGFDDRFLYDA++GK VE+KC +L LDH    +PF+ Y++ALE+ K+SLY
Sbjct:   12 DLMKMAIDEGCRGVHLGEGGPFGAVITQHGQVIARGHNRVLQTNDPTAHAEVVAIRDACAKLGRFSLHDCVLYSSCEPCPMCFSAIHWAKIPTCFYSATADDAAKVGFDDRFLYDAIRGKPVEEKCRVLLLDHPHTHLPFQQYKRALEQNKSSLY 166          
BLAST of Gcaud8013.t1 vs. uniprot
Match: UPI001CF3AAA2 (nucleoside deaminase n=1 Tax=Clostridium algoriphilum TaxID=198347 RepID=UPI001CF3AAA2)

HSP 1 Score: 181 bits (459), Expect = 1.990e-55
Identity = 77/150 (51.33%), Postives = 113/150 (75.33%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALEE 177
            +E +K+AIDE L G++  DGGPFGAVI +NG +I+  HN V ++ DPTAHAE+ A+R A SKL RF L DC +YSSCEPCPMCF+AIHWA+I K +Y  T +DAA++ FDDR++YD ++G A + + +++ LD ++ + PFR ++  +++
Sbjct:    2 NEFMKLAIDEALDGMKSNDGGPFGAVIVRNGEIISYAHNEVVKTNDPTAHAEVTALRKASSKLSRFDLSDCEIYSSCEPCPMCFAAIHWAKIKKLYYGATKEDAANINFDDRYIYDVIKGTAKKLQVEVIQLDREESLEPFRKWKMKIDK 151          
BLAST of Gcaud8013.t1 vs. uniprot
Match: UPI001C0DD7FA (nucleoside deaminase n=1 Tax=Clostridium lacusfryxellense TaxID=205328 RepID=UPI001C0DD7FA)

HSP 1 Score: 179 bits (453), Expect = 1.620e-54
Identity = 75/150 (50.00%), Postives = 113/150 (75.33%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALEE 177
            ++ +K+AIDE + G+ + DGGPFGAVI +NG +I+  HN V ++ DPTAHAE+ A+R A SKLGRF L DC +YSSCEPCPMCF+AIHWA+I K +Y  T +DAA++ FDD+++YD ++G A E + D++ +   + + PFR+++  +++
Sbjct:    2 NKFMKLAIDEAISGMTLNDGGPFGAVIVKNGEIISFAHNEVVKTNDPTAHAEVTALRKASSKLGRFDLSDCEIYSSCEPCPMCFAAIHWAKIKKLYYGSTREDAANINFDDKYIYDVIKGTASELQVDVIQIHRLESLEPFRLWKIKIDK 151          
BLAST of Gcaud8013.t1 vs. uniprot
Match: UPI001CF2DE91 (nucleoside deaminase n=1 Tax=Clostridium sp. CS001 TaxID=2880648 RepID=UPI001CF2DE91)

HSP 1 Score: 176 bits (447), Expect = 1.320e-53
Identity = 76/149 (51.01%), Postives = 108/149 (72.48%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALE 176
            +E +K+A++E LKG+    GGPFGAVI +NG +I   HN V  + DPTAHAE+ AIR A S LGRF L DC +YSSCEPCPMCF+AIHWA+I K +Y  T +DAA++ FDD+++YD + G A E + ++L +D +D + PF+ ++  ++
Sbjct:    2 NEFMKIAVNEALKGMNCNAGGPFGAVIVRNGEIICSAHNEVVETNDPTAHAEVSAIRKASSLLGRFDLSDCEIYSSCEPCPMCFAAIHWAKIKKLYYGSTRNDAANIDFDDQYIYDVINGTATELQVEVLQIDREDSLEPFKQWKGKMD 150          
BLAST of Gcaud8013.t1 vs. uniprot
Match: A0A1M6BZH2_9CLOT (Guanine deaminase n=1 Tax=Clostridium amylolyticum TaxID=1121298 RepID=A0A1M6BZH2_9CLOT)

HSP 1 Score: 175 bits (444), Expect = 3.780e-53
Identity = 75/149 (50.34%), Postives = 110/149 (73.83%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALE 176
            +E +K+A++E  +G++  DGGPFGAVI ++G +IAR HN V  + DPTAHAE+ AIR A   LGRF L DC +YSSCEPCPMCF+AIHWA+I K +Y CT +DAA++ FDD+++YD ++G A E + ++L +D  + + PF  ++  ++
Sbjct:    2 NEFMKIAVEEAFQGMKNNDGGPFGAVIVKDGKIIARAHNEVIGTNDPTAHAEVNAIRKATRALGRFDLSDCEIYSSCEPCPMCFAAIHWAKIKKLYYGCTREDAANIDFDDQYIYDVIKGTAKELQVEVLQVDRTESLEPFEEWKFKMD 150          
BLAST of Gcaud8013.t1 vs. uniprot
Match: A0A0G0MP99_9BACT (Guanine deaminase, guanine deaminase n=2 Tax=unclassified Candidatus Peregrinibacteria TaxID=1801912 RepID=A0A0G0MP99_9BACT)

HSP 1 Score: 174 bits (442), Expect = 7.600e-53
Identity = 76/146 (52.05%), Postives = 108/146 (73.97%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRK 173
            ++ +++A+ E LKG+    GGPFGAVIT+NG ++A+ HN V ++ DPTAHAEI AIR A  K  RF L DC ++SSCEPCPMCF+AIHWA++ K ++ACT  DAA++GFDD+F+YD + GKA  K+  +  +D  + M PF+ ++K
Sbjct:    2 NKFMQIAVQEALKGMRANHGGPFGAVITKNGKIVAQAHNMVVKTNDPTAHAEITAIRAATKKFKRFDLSDCEIHSSCEPCPMCFAAIHWAKMRKLYFACTRKDAANIGFDDKFIYDVILGKAKRKQVSIEKIDRTNSMKPFQEWQK 147          
BLAST of Gcaud8013.t1 vs. uniprot
Match: UPI00058AC088 (nucleoside deaminase n=1 Tax=Clostridium polynesiense TaxID=1325933 RepID=UPI00058AC088)

HSP 1 Score: 174 bits (441), Expect = 1.080e-52
Identity = 76/149 (51.01%), Postives = 108/149 (72.48%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALE 176
            +E +K+AI+E  +G++   GGPFGAVI ++G +IAR HN V  + DPTAHAE+ AIR AC  LGRF L DC +YSSCEPCPMCF+AIHWA+I K +Y  T +DAAD+ FDD+++YD ++G A E + D++ +D    + PF  ++  ++
Sbjct:    2 NEFMKIAIEEAFEGMKNNHGGPFGAVIVKDGKIIARAHNEVISTNDPTAHAEMNAIRKACRILGRFDLSDCEIYSSCEPCPMCFAAIHWAKIKKLYYGATREDAADIDFDDQYIYDVIRGNASELQVDVVQIDRDKSLEPFHEWKFKMD 150          
BLAST of Gcaud8013.t1 vs. uniprot
Match: A0A401UL38_9CLOT (tRNA-specific adenosine deaminase n=3 Tax=Clostridium TaxID=1485 RepID=A0A401UL38_9CLOT)

HSP 1 Score: 172 bits (435), Expect = 8.770e-52
Identity = 74/149 (49.66%), Postives = 108/149 (72.48%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALE 176
            +E +K+AIDE + G+   DGGPFGAVI +NG +I+R HN V  + DPTAHAE+ AIR A + L RF L DCV+YSSCEPCPMCF+AIHWA+I K +Y  T  DAA + FDD+++YD + G A + + +++ +D ++ + PF+ ++  ++
Sbjct:    2 NEFMKIAIDEAMVGMANNDGGPFGAVIVRNGEIISRAHNEVIHTNDPTAHAEVTAIRRASNILSRFDLSDCVIYSSCEPCPMCFAAIHWAKIKKLYYGSTRHDAAAIDFDDQYIYDVINGTATQLQVEVIQIDREESLEPFKKWKGKMD 150          
BLAST of Gcaud8013.t1 vs. uniprot
Match: E3PR83_ACESD (Guanine deaminase n=2 Tax=Acetoanaerobium TaxID=186831 RepID=E3PR83_ACESD)

HSP 1 Score: 171 bits (433), Expect = 1.760e-51
Identity = 78/148 (52.70%), Postives = 103/148 (69.59%), Query Frame = 0
Query:   29 ELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCDLLHLDHKDKMIPFRVYRKALE 176
            E +K AI E  +G+ +  GGPFGAVI ++  VIARGHN+V  + DPTAHAEI AIR+A   LGRF L DC+LY++CEPCPMC+SA HWA+IP  +Y  T DDA D+GFDD ++Y+ LQ K   +K  +  +D +  + PFR Y +  E
Sbjct:    3 EFMKEAIKEAFEGIGLRAGGPFGAVIVKDNKVIARGHNKVIETNDPTAHAEIVAIREATKLLGRFDLSDCILYTTCEPCPMCYSAAHWAKIPLIYYGATQDDAKDIGFDDSYIYEVLQNKHSNEKMKICQIDREQCLEPFRKYEEDEE 150          
BLAST of Gcaud8013.t1 vs. uniprot
Match: A0A7X9H741_CLOSP (Nucleoside deaminase n=1 Tax=Clostridium sp. TaxID=1506 RepID=A0A7X9H741_CLOSP)

HSP 1 Score: 171 bits (433), Expect = 1.760e-51
Identity = 74/128 (57.81%), Postives = 97/128 (75.78%), Query Frame = 0
Query:   28 SELIKMAIDEGLKGVEVGDGGPFGAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVLYSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAVEKKCD 155
            +E +K AI+E + GVE   GGPFGAV+ + G +IARGHN+V  + DPT HAE+ AIRDA  KLGRF L DC LY+SCEPCPMCFSAI+WA+IPK +Y CT +DAA +GFDD ++Y+ + G   +K+ +
Sbjct:    2 NEFLKAAIEEAIYGVENNHGGPFGAVVVREGKIIARGHNKVILNNDPTDHAEMIAIRDAAGKLGRFDLSDCELYTSCEPCPMCFSAIYWAKIPKVYYGCTREDAAQIGFDDNYIYEVIMGATSDKRAE 129          
The following BLAST results are available for this feature:
BLAST of Gcaud8013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IC35_9FLOR1.440e-8173.55Guanine deaminase n=1 Tax=Gracilariopsis chorda Ta... [more]
UPI001CF3AAA21.990e-5551.33nucleoside deaminase n=1 Tax=Clostridium algoriphi... [more]
UPI001C0DD7FA1.620e-5450.00nucleoside deaminase n=1 Tax=Clostridium lacusfryx... [more]
UPI001CF2DE911.320e-5351.01nucleoside deaminase n=1 Tax=Clostridium sp. CS001... [more]
A0A1M6BZH2_9CLOT3.780e-5350.34Guanine deaminase n=1 Tax=Clostridium amylolyticum... [more]
A0A0G0MP99_9BACT7.600e-5352.05Guanine deaminase, guanine deaminase n=2 Tax=uncla... [more]
UPI00058AC0881.080e-5251.01nucleoside deaminase n=1 Tax=Clostridium polynesie... [more]
A0A401UL38_9CLOT8.770e-5249.66tRNA-specific adenosine deaminase n=3 Tax=Clostrid... [more]
E3PR83_ACESD1.760e-5152.70Guanine deaminase n=2 Tax=Acetoanaerobium TaxID=18... [more]
A0A7X9H741_CLOSP1.760e-5157.81Nucleoside deaminase n=1 Tax=Clostridium sp. TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 28..125
e-value: 6.5E-24
score: 83.7
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 25..148
score: 24.172083
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 28..182
e-value: 8.1E-48
score: 164.1
NoneNo IPR availablePIRSRPIRSR006769-1PIRSR006769-1coord: 29..129
e-value: 9.2E-7
score: 25.9
NoneNo IPR availablePIRSRPIRSR006769-3PIRSR006769-3coord: 29..129
e-value: 9.2E-7
score: 25.9
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASE FAMILY MEMBERcoord: 30..151
NoneNo IPR availablePANTHERPTHR11079:SF161GUANINE DEAMINASEcoord: 30..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableCDDcd01285nucleoside_deaminasecoord: 32..139
e-value: 6.5123E-46
score: 144.682
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR016192APOBEC/CMP deaminase, zinc-bindingPROSITEPS00903CYT_DCMP_DEAMINASES_1coord: 77..114
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 27..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_47_length_66049_cov_4.331180contigNODE_47_length_66049_cov_4.331180:1956..2808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8013.t1Gcaud8013.t1Gracilaria caudata M_176_S67 malemRNANODE_47_length_66049_cov_4.331180 1956..2808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8013.t1 ID=Gcaud8013.t1|Name=Gcaud8013.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=184bp
MQRVFGVALSIIKFVIWCSPVAQYPLYSELIKMAIDEGLKGVEVGDGGPF
GAVITQNGHVIARGHNRVPRSKDPTAHAEIEAIRDACSKLGRFSLKDCVL
YSSCEPCPMCFSAIHWARIPKCFYACTADDAADVGFDDRFLYDALQGKAV
EKKCDLLHLDHKDKMIPFRVYRKALEERKASLY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016192APOBEC/CMP_deaminase_Zn-bd
IPR016193Cytidine_deaminase-like