Gcaud7975.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7975.t1
Unique NameGcaud7975.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length145
Homology
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A2V3IX20_9FLOR (Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX20_9FLOR)

HSP 1 Score: 278 bits (710), Expect = 3.070e-91
Identity = 134/144 (93.06%), Postives = 138/144 (95.83%), Query Frame = 0
Query:    1 MFRSSGGKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSDDARSKSGHRPQRRDSRASSASVDSSASRKKKGAGFFSKK 144
            MFR  G KK +APEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLG+S+D RSKSGHRPQRRDSRASSASVDSSASR+KKG GFFSKK
Sbjct:  225 MFRGGGSKKSAAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGSSEDTRSKSGHRPQRRDSRASSASVDSSASRRKKGTGFFSKK 368          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A7S1XHG9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHG9_9RHOD)

HSP 1 Score: 196 bits (497), Expect = 6.790e-62
Identity = 102/152 (67.11%), Postives = 115/152 (75.66%), Query Frame = 0
Query:    1 MFRSSGGKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSDDARSKSGHRPQR--------RDSRASSASVDSSASRKKKGAGFFSKK 144
            MF+ S  K  +  +GVKTEF++ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGIDETSLNNVRYVL EPDL TSD A  +S  R +R        + S+ SS +VD +  +KK   G  +KK
Sbjct:    1 MFQRSAPKVKTV-DGVKTEFIYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRYVLTEPDLSTSDTADGRSQTRGKRASATLSGSQSSQGSSGAVDPANLKKKVSGGRRAKK 151          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A7S0ZGK0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGK0_9RHOD)

HSP 1 Score: 187 bits (475), Expect = 1.330e-58
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0
Query:   12 APEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSDDARSKSGHRPQ 116
            A +GVK EFV+ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGIDETSLNNVR+VLPEPDL    D  +    RP+
Sbjct:   11 AVDGVKVEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRFVLPEPDLSAERDGVADPRARPR 115          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A5J4Z5H3_PORPP (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5H3_PORPP)

HSP 1 Score: 186 bits (473), Expect = 5.610e-58
Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDL 101
            +GVK EFV+ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGIDETSLNNVRYVLPEPDL
Sbjct:   17 DGVKVEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRYVLPEPDL 104          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A2V3IYZ1_9FLOR (Phosphoglucan phosphatase LSF1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYZ1_9FLOR)

HSP 1 Score: 184 bits (466), Expect = 2.570e-57
Identity = 88/110 (80.00%), Postives = 94/110 (85.45%), Query Frame = 0
Query:    1 MFRSSGGKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLG-TSDDARS 109
            MF SS   + +  E VKTEFV+ADGAKDDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+TSLNNVR VLP+PDL  T+D  RS
Sbjct:    1 MFGSS---RKAKVEPVKTEFVYADGAKDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRVVLPQPDLNDTADTPRS 107          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A1X6NSE9_PORUM (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSE9_PORUM)

HSP 1 Score: 184 bits (468), Expect = 7.590e-57
Identity = 81/88 (92.05%), Postives = 84/88 (95.45%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDL 101
            EGVKTEFV+ADGAKDDVQLSGDWNDWKAIQ FHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+TSLNNVRYVLPEP+L
Sbjct:   13 EGVKTEFVYADGAKDDVQLSGDWNDWKAIQCFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRYVLPEPEL 100          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A1X6NM66_PORUM (AMPK1_CBM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM66_PORUM)

HSP 1 Score: 182 bits (463), Expect = 1.230e-56
Identity = 97/147 (65.99%), Postives = 103/147 (70.07%), Query Frame = 0
Query:    1 MFRSSGGKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSDDAR-------------SKSGHRPQRRDSRASSASVDSSASRK 134
            MF  +   KP   EGVKTEFV+ADGA DDVQLSGDWNDWKAIQMF E AG WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+ SLNNVRYVLPEPDLG                   S    R  RRDSR+S+AS   S  +K
Sbjct:    1 MFGRTHAVKPKL-EGVKTEFVYADGANDDVQLSGDWNDWKAIQMFCECAGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDNSLNNVRYVLPEPDLGADRGGXXXXXXXXXXXXXXSLPQQRLSRRDSRSSAASSQMSVPKK 146          
BLAST of Gcaud7975.t1 vs. uniprot
Match: UPI001E1D6066 (uncharacterized protein LOC123543401 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6066)

HSP 1 Score: 178 bits (451), Expect = 7.710e-55
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0
Query:   17 KTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDL 101
            KTEFVFADGA+DDVQLSGDWNDWKAIQMFHEG G WSVVTPVPPGPHEFKFIVDGEWKHS RHPTIGID+TSLNNVR VLP+PDL
Sbjct:    4 KTEFVFADGARDDVQLSGDWNDWKAIQMFHEGGGMWSVVTPVPPGPHEFKFIVDGEWKHSNRHPTIGIDDTSLNNVRCVLPQPDL 88          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A7S3EHH0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EHH0_9RHOD)

HSP 1 Score: 172 bits (435), Expect = 2.090e-52
Identity = 82/116 (70.69%), Postives = 91/116 (78.45%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSDD-ARSKSGHRPQRRDSRASSASVD 128
            +GVK EFV+ DGA+DDVQLSGDW DW+AIQMFHEG G WSVVTPVPPG HEFKFIVDGEWKHS RHPTIGIDETSLNNVR VLPEP + +    A   +G  P  + SRA S + D
Sbjct:   13 DGVKVEFVYCDGARDDVQLSGDWTDWRAIQMFHEGGGMWSVVTPVPPGAHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRVVLPEPRIESQKTIAEPPAGSIPLSKTSRAGSRASD 128          
BLAST of Gcaud7975.t1 vs. uniprot
Match: A0A7S0BFF0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFF0_9RHOD)

HSP 1 Score: 171 bits (432), Expect = 8.710e-52
Identity = 81/112 (72.32%), Postives = 90/112 (80.36%), Query Frame = 0
Query:   14 EGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAGTWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPDLGTSDD-ARSKSGHRPQRRDSRASS 124
            +GVK EFV+ DGA+DDVQLSGDW DW+AIQMFHEG G WSVVTPVPPG HEFKFIVDGEWKHS RHPTIGIDETSLNNVR VLPEP + +    A   +G  P  + SRA+S
Sbjct:   13 DGVKVEFVYCDGARDDVQLSGDWTDWRAIQMFHEGGGMWSVVTPVPPGAHEFKFIVDGEWKHSNRHPTIGIDETSLNNVRVVLPEPRIESQKTIAEPPAGSIPLSKTSRAAS 124          
The following BLAST results are available for this feature:
BLAST of Gcaud7975.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX20_9FLOR3.070e-9193.06Very-long-chain 3-oxoacyl-CoA reductase n=1 Tax=Gr... [more]
A0A7S1XHG9_9RHOD6.790e-6267.11Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZGK0_9RHOD1.330e-5880.95Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z5H3_PORPP5.610e-5893.18SNF1-related protein kinase regulatory subunit bet... [more]
A0A2V3IYZ1_9FLOR2.570e-5780.00Phosphoglucan phosphatase LSF1, chloroplastic n=1 ... [more]
A0A1X6NSE9_PORUM7.590e-5792.05AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A1X6NM66_PORUM1.230e-5665.99AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
UPI001E1D60667.710e-5591.76uncharacterized protein LOC123543401 n=1 Tax=Merce... [more]
A0A7S3EHH0_9RHOD2.090e-5270.69Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BFF0_9RHOD8.710e-5272.32Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 17..96
e-value: 6.7E-17
score: 61.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 9..97
e-value: 5.7E-20
score: 73.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..144
NoneNo IPR availablePANTHERPTHR103435'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNITcoord: 11..130
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 17..95
e-value: 2.58537E-23
score: 84.958
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 19..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_168_length_41232_cov_4.499891contigNODE_168_length_41232_cov_4.499891:11505..12010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7975.t1Gcaud7975.t1Gracilaria caudata M_176_S67 malemRNANODE_168_length_41232_cov_4.499891 11505..12010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7975.t1 ID=Gcaud7975.t1|Name=Gcaud7975.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=145bp
MFRSSGGKKPSAPEGVKTEFVFADGAKDDVQLSGDWNDWKAIQMFHEGAG
TWSVVTPVPPGPHEFKFIVDGEWKHSERHPTIGIDETSLNNVRYVLPEPD
LGTSDDARSKSGHRPQRRDSRASSASVDSSASRKKKGAGFFSKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032640AMPK1_CBM
IPR013783Ig-like_fold
IPR014756Ig_E-set