Gcaud7974.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7974.t2
Unique NameGcaud7974.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length284
Homology
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BLAST of Gcaud7974.t2 vs. uniprot
Match: A0A1X6NWH6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWH6_PORUM)

HSP 1 Score: 59.3 bits (142), Expect = 2.640e-6
Identity = 45/145 (31.03%), Postives = 64/145 (44.14%), Query Frame = 0 
Query:  144 RCVCLTYDTSTL---RHGVKAFANNLSSQGTWFTPSVDDRLSGVVIDRDGSYMAVLRTNCRTSVGGELLVFDVAKIEDGPITIVN-LDSDKFGALRSAAGGVWAQHSMEWS-EESSKPIKSAYEIFDSRGWNDIDSSFSSLGFNQ 283
            R V +  DT +L   +    A     ++  TW       R+   V+  DG ++           GG L V+         + +V  LD+  +G      GG W      W+ EE +   K+AYEIF S+GWN +DSSFS LG NQ
Sbjct:  459 RAVLIRVDTDSLPPLQVDAPAAVTAAAAAATWVADDPAVRVGSPVLTDDGRWVLAPMG------GGRLGVWSTEPESGDRLQLVCVLDAGAYGLGDGGVGGAWT--GRVWTAEECATRKKTAYEIFQSKGWNSVDSSFSGLGLNQ 595
The following BLAST results are available for this feature:
BLAST of Gcaud7974.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X6NWH6_PORUM2.640e-631.03Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_168_length_41232_cov_4.499891contigNODE_168_length_41232_cov_4.499891:9053..9904 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7974.t2Gcaud7974.t2Gracilaria caudata M_176_S67 malemRNANODE_168_length_41232_cov_4.499891 9053..9904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7974.t2 ID=Gcaud7974.t2|Name=Gcaud7974.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=284bp
MGKPARKEPPSIDLKRGTVLTVMDRNGGLLGTVRISDVIINHLGISETAN
GFVVRGLCLSAKEMEPIISLRTVSDAQSGHLWASQDPISLRSDLFEAAIS
PNDLSEGNQTTLSKENFSFPCFEQDLMIYEAAGFTDLEMANKYRCVCLTY
DTSTLRHGVKAFANNLSSQGTWFTPSVDDRLSGVVIDRDGSYMAVLRTNC
RTSVGGELLVFDVAKIEDGPITIVNLDSDKFGALRSAAGGVWAQHSMEWS
EESSKPIKSAYEIFDSRGWNDIDSSFSSLGFNQ*
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