Gcaud7945.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7945.t1
Unique NameGcaud7945.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length712
Homology
BLAST of Gcaud7945.t1 vs. uniprot
Match: A0A2V3IXE8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXE8_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 5.470e-47
Identity = 201/731 (27.50%), Postives = 323/731 (44.19%), Query Frame = 0
Query:    4 RKLLRKGSSEERYADLSFSNDDDSSLRRSPLYDNDT-KDTVHNAALLKPLKGFRMAKSCVGQHDSMYDRNIDEAIQPRE-PQKGLET--------KGRDRCEQYGLVHRKRTNPHRPIVSNGDKVDVDMGIALKAMSESDNWNSAFKAKHGVEARVIPADNLFVRAYHFIQLVFATLCQVLKNLTTLPVRLWRVGRKELSNVKENSQNRTSYSSSEKCNSIMNSVNERCSEKREFDL-TKKVQGGSTVDHEVSKSREXXXXXXXXXXXXXXXXXXXXXXXLKSSEGPSGEGHSDRNRITEGGKSIERSGSNSSSASKTMFGGIVTNVDMYGKRTKHYMPRTSSQVVHDDSYDSERKSFKNTGDNSSEDEIADQHGGKQELPVRFDHPMKARETLSEGTSAEENDGDAWLWHKIENSDKWMGASERNLHHGS-AVKEMPSPLRLETPRHLQCGTHHTSMDSSNEYSLFSPEPEARRNVQNETPKISVADEIDDNERHVLVDGELISPKGHRIRYKDSNEQSQLPVRNIEQQHQRSIERRTKMPMALRMTSTNSETHVFA------ENDDPSNAQGPHLSPA-----RGSGVSTPRRKAFIGTGIKSDVKAVTESVKRVFMRNKPEPDTRFTSPRSAQKTLTIIADVMVKELACMVAVRRTGALKLRSEKVYSPDARLRTSLRFRALDEFSCNVIISRARDDDFTVTTADYVNFVAGLQQRFLNSVTGAWRYQ 711
            RKL+RK SS++RYADLS SND + +  R    D+D  ++TV  A   +  K     KS + + D +   +  +    R+    G+ +        K ++  +     +  + N + P+     K   ++    + +++ D  +   + +           ++ + A   I L  +T+ + L ++ T P R      K+  N+  + +            S MN V ++ +   E  + T     GS  D   S S                          +S E            + E  +S+  SG+++ S+S+  +G      D+     +      S   V      SE+     T  + +E ++A       +LP         R + SE T+ E  D D  LW +++ S +W   +E+ +   + A +E  SP+  E                    ++    P +  +V   T + +V     +N    +     + P   R + ++S+ ++   + +    + R  E         R + T+ E  V+       E  +P   Q  +LSP          V   RRK  +  G+  DVKA+T+S+ RVF +NKPEPDTRFTSPRSA KT+ +IAD+MVKE  CMVAVRR GALKLR EK YS +  LR  + F+ LD FSCNV+I+R+R D+FTV TADYVNFVAGLQQ  LN+++G+ RYQ
Sbjct:   40 RKLMRKKSSDDRYADLSSSNDGEKTPNRFSSIDSDANRETVPLAVPSRDAKVLHEQKSGLAKQDHLGPEDAADMSTTRDFGMIGIFSNWFRFRTKKDQNTAQTLDDANGTKLNEYNPMPGLSTK---NLAPDQEPVTKMDRTSHVGRGRKSKIVIFSGLHSVLIEACSMILLFISTVYRSLMSIMTSPFR-----HKKYRNLTASRR------------SEMNIVGKKNTNAEETIIKTNTSADGSIEDRGASSSSR-----------------------TESEE-----------LVVEREESMLSSGNSTLSSSRGSYG------DLESTTAQGENAHVSDLKVSGTITCSEQMPLAKT--DGTETKLARIGESSSDLPS-----TAIRSSSSETTNTE--DSDEHLWQRVQTSGQWTDDAEQTIRRATFAGQERLSPVSQE--------------------NITKTHPHSSNHVLGSTQRDNVHSNTQENALQGIRGTRAVRPPTQRYQKRNSSFEAHRSLEHPNDLYYR--ESGFSSTDKRRDSFTSQEPDVYGPERFRRELYEPDGDQ--YLSPFSVQYHEPMYVPEIRRKHPLRKGVIGDVKAMTDSLFRVFAKNKPEPDTRFTSPRSAHKTMALIADLMVKEFNCMVAVRRNGALKLRCEKHYSLNRMLRARVTFQELDIFSCNVVIARSRADNFTVPTADYVNFVAGLQQALLNNISGSERYQ 677          
The following BLAST results are available for this feature:
BLAST of Gcaud7945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXE8_9FLOR5.470e-4727.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..572

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1283_length_11823_cov_4.226560contigNODE_1283_length_11823_cov_4.226560:4789..6924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7945.t1Gcaud7945.t1Gracilaria caudata M_176_S67 malemRNANODE_1283_length_11823_cov_4.226560 4789..6924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7945.t1 ID=Gcaud7945.t1|Name=Gcaud7945.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=712bp
MNLRKLLRKGSSEERYADLSFSNDDDSSLRRSPLYDNDTKDTVHNAALLK
PLKGFRMAKSCVGQHDSMYDRNIDEAIQPREPQKGLETKGRDRCEQYGLV
HRKRTNPHRPIVSNGDKVDVDMGIALKAMSESDNWNSAFKAKHGVEARVI
PADNLFVRAYHFIQLVFATLCQVLKNLTTLPVRLWRVGRKELSNVKENSQ
NRTSYSSSEKCNSIMNSVNERCSEKREFDLTKKVQGGSTVDHEVSKSRER
SSIKTHVDITMATEDRNIHDHELKSSEGPSGEGHSDRNRITEGGKSIERS
GSNSSSASKTMFGGIVTNVDMYGKRTKHYMPRTSSQVVHDDSYDSERKSF
KNTGDNSSEDEIADQHGGKQELPVRFDHPMKARETLSEGTSAEENDGDAW
LWHKIENSDKWMGASERNLHHGSAVKEMPSPLRLETPRHLQCGTHHTSMD
SSNEYSLFSPEPEARRNVQNETPKISVADEIDDNERHVLVDGELISPKGH
RIRYKDSNEQSQLPVRNIEQQHQRSIERRTKMPMALRMTSTNSETHVFAE
NDDPSNAQGPHLSPARGSGVSTPRRKAFIGTGIKSDVKAVTESVKRVFMR
NKPEPDTRFTSPRSAQKTLTIIADVMVKELACMVAVRRTGALKLRSEKVY
SPDARLRTSLRFRALDEFSCNVIISRARDDDFTVTTADYVNFVAGLQQRF
LNSVTGAWRYQ*
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