Gcaud7937.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7937.t1
Unique NameGcaud7937.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length258
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud7937.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 156..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 195..257
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 172..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_471_length_24490_cov_4.556457contigNODE_471_length_24490_cov_4.556457:19420..20193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7937.t1Gcaud7937.t1Gracilaria caudata M_176_S67 malemRNANODE_471_length_24490_cov_4.556457 19420..20193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7937.t1 ID=Gcaud7937.t1|Name=Gcaud7937.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=258bp
MLTTVRQDMMPVAVRQLTQPVLSPLPQRPSPSPSPNVQPQQPPASPLPVA
PVPPPVPAGGDGVPGVADFEVTSIPPLSECGGPLFRMQIVLLLELCFEIL
FLFLRCFAERDDDDDSSTSGTTDTNASIEMNMRAYILIRAIYTVPVLIVN
TSIYWIGGGPTGACLSNYSQLQVPFTHLIFYLLFCIIIIIMGLIRIDEWD
PSTTDTTYRSRTFRSDGPPTRTTSYFRYTRPARRHNTSTSYSEPKFRCNL
GCCAINI*
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