Gcaud7936.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7936.t1
Unique Name	Gcaud7936.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	917

Homology

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BLAST of Gcaud7936.t1 vs. uniprot
Match: A0A2V3J0W5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0W5_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 1.660e-13
Identity = 83/407 (20.39%), Postives = 172/407 (42.26%), Query Frame = 0

Query:  510 KPLPDIERELYLKEEKGYTIPAIEIKLQQEHLVSPIIRYIRDHPRTYRHVRAPNGNQ-VVLVPDDELFGVLYRLVKNLMLHRLEGKIASFVSHILNKSINNKIPGYFCRKFIMFVEKLSVPNKLKDVHNYIFKGKNHVDITWILQKLERHLDRRICLRAPTYMTAVFLTRLEQHRRESEFVKKWSKDVRAWGTKSLRKSVILKQNHVMYEKGTVPNQMGELERRQAEFQMVIEQFTHEFCWYSREMFLCEDIQSHYILARFMMRSII-QKKRTKLKHEVGEFGNQSRLNFWVNIEEYINALWKVMVDELYDFLQFADPAVFMVELCKELDTRCKKILLDVKTDMNPRKSKPKPKAVYFPHYGNQIGSFCAKSFGKAEAVLTFQKTRLS--SKRQ-NLESLEEAYDLF 911
            + LP IE  +   ++K   +  I  ++ +    S  +  +    +  R     N +  +  V D+++F VLY ++K+ +LHR E   A+FVS+I+ +S+  K    F  +FIM +E ++    ++ +   I        +    +         +     T   ++  + ++        ++   K + + G +  R    L +  + Y+   +P++   +E++ +       +  H   WY  E+FLC D+  H++ AR ++++II   K       VG+ G+  +  F+  + + I  L  ++V E+ +       A FM  +        + ++L       P            P +G ++G        K E+ + +Q   LS  +KR+ N+ S+  AYD +
Sbjct:  219 RSLPSIEETVANTQKKDSPVENIIFEVFENDSRSVFLERLLSFSKPVRQHNQDNLSLGLFAVRDEDMFFVLYEMMKSRILHRQEAFHAAFVSYIMQESMAEKDCSSFFLRFIMSIEAVTSRTNVQQLATAILPSPADDALERARKAANNSFRDEVAKFDETNFISLTTSMIDDSEMHLAEIRARKKGLHSIGAEFKRMRRALDEKGMPYKYIRLPSRKTSVEKKSSVLTARRGELVHLIAWYLNELFLCGDVTVHFVYARMLVKAIIIHTKEEFYADRVGQSGDLLKRLFYDYLVQRIETLGDLIVHEMTNERDMRIQA-FMWMIRSNFSEPDRSLVLSFDETKVPELEGISIGNPLVPDHGVRLGPLLVS---KLESDIQYQNWSLSFLNKRELNVGSVRRAYDRY 621

The following BLAST results are available for this feature:

BLAST of Gcaud7936.t1 vs. uniprot

BLAST of Gcaud7936.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J0W5_9FLOR	1.660e-13	20.39	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 887..907
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 438..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..474

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_471_length_24490_cov_4.556457	contig	NODE_471_length_24490_cov_4.556457:10364..13114 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7936.t1	Gcaud7936.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_471_length_24490_cov_4.556457 10364..13114 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7936.t1 ID=Gcaud7936.t1|Name=Gcaud7936.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=917bp
MGDNWTRHELVEGLTRLRGENPVRQEQFDPDSLFFDELNPQETGVRQEPP
SQPDNVLDFSPLGYEHGQLQAAFDSTHDPTYPEQNAFLLTEPDNSLSLRD
VTVLPSTVAGEERPTRTSQDYVQESESNLHALNGGQIRPPSIQTAINMQQ
PLNYTSLPSNLGFHFSPWGDLLEQNNNQVCAGNMGTLQIPNANYVQPLPI
QTTLNVQRPLPTVDFPPQASSLPAQWNGWSERDNAQADSRNESTVGELNG
LHMQTPVQRVSNEHQFSEMAHIGQIYPASHAGDFQTNSRETNPEPGQNLQ
AGSENQHESQGRTDRDSLPQKKTASLRDEEETESNGSFKVSFSVSDDGSE
GDRAEPFQLRPPNQASQSEVARETPAASDTQQCRRMTNEIQGTRDIHSRQ
QSRRSNVSKSPGSTASEARQAVGQGARTRSVRIVTPPRITPEREDRRSIS
ERRPTPTASRAHQRDIRDRRFHAQEVENVPLEKEKQPENETEGIKPLTEE
YVRSLDFRYKPLPDIERELYLKEEKGYTIPAIEIKLQQEHLVSPIIRYIR
DHPRTYRHVRAPNGNQVVLVPDDELFGVLYRLVKNLMLHRLEGKIASFVS
HILNKSINNKIPGYFCRKFIMFVEKLSVPNKLKDVHNYIFKGKNHVDITW
ILQKLERHLDRRICLRAPTYMTAVFLTRLEQHRRESEFVKKWSKDVRAWG
TKSLRKSVILKQNHVMYEKGTVPNQMGELERRQAEFQMVIEQFTHEFCWY
SREMFLCEDIQSHYILARFMMRSIIQKKRTKLKHEVGEFGNQSRLNFWVN
IEEYINALWKVMVDELYDFLQFADPAVFMVELCKELDTRCKKILLDVKTD
MNPRKSKPKPKAVYFPHYGNQIGSFCAKSFGKAEAVLTFQKTRLSSKRQN
LESLEEAYDLFHQSTR*