Gcaud7907.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7907.t1
Unique NameGcaud7907.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length496
Homology
BLAST of Gcaud7907.t1 vs. uniprot
Match: A0A2V3IHG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG6_9FLOR)

HSP 1 Score: 650 bits (1677), Expect = 1.520e-229
Identity = 338/498 (67.87%), Postives = 394/498 (79.12%), Query Frame = 0
Query:    1 MSPPRKRPRTQPISAKRPPAAPRQSRSRPSLADEASRPRTLVDLLGATSSRAEQVLGDDAPNDAWSVLANTVDNLASDSRQPNPVPARDFDQVQPPTGAEIQEPPHEHLPIDLSIKTLLTVVSSKSLWWTRVRGQGEEYEALHDLLSGVDALTEAHPAKPPIGSDAVIEGQVLTEALTQAKRQFYRALLHFRYPCTTLPPVISRRWQAVFSSNARTRPDSALQEATNVAMERLRLWQSALQSLFFGYKRGHIDHFYVLLPSTILLFSHTFAQNDNQ---NGTTRHKRRGQLRSTSDSTLHACFAKGSLGLRSLLSDYAVPFRLERGSSPSGGESEPPVIAEGQLAVQAVYNFVLSVGHKISNATDVPLLLCDKPFRGGTAITAQVTDTDEANVIDSSGGATRLRYSVKIHGLLTPRQVRAVCRALVETQDRDFSVQMNTEERSETLNVCEQSVTLPPSNGTTSAQQKMSHAIQGHRVLSRVARHAPSPKFLLYTRAVE 495
            MSPPRKRPRTQPISAKRPP  PRQ+RSRP+  DE SRPRTLVDLLG +SSRAEQVLGD+AP+DAWSVLANT+DNL S+SRQ +        Q  PP+  ++QEP +EHLP+DLSIKT +TV+SS+SL WT +RGQ EEYEAL DLLS VDAL +A P KPP+G+DAV      +E   +AKR FYRALLHFRYPCTTLPPVISRRWQ+VF+  +R  PDSALQEAT+VAMERLRLWQSALQSLFFGYKRGHIDHFYV+LPST LLFSH    N  +   NG + H+R     ST++ TL ACFAKGS GLRSLLSDYAVPF++E GS  +GGE++P V+AEG LAVQAVYNF L+VGHKISNATDVP+LLCDKPFRGGTA++AQVTD DE NVIDS GG TRLRYSVK++GLLTPRQ+ A+C+A V TQD D+SVQ+ TE RSE LNV E  +    +  + ++ Q  S  +QG RVLSR+   A S  F LYTRAVE
Sbjct:   46 MSPPRKRPRTQPISAKRPPPPPRQTRSRPAPQDENSRPRTLVDLLGRSSSRAEQVLGDNAPSDAWSVLANTLDNLPSESRQNS----THSHQPAPPSAPDLQEPSNEHLPLDLSIKTAITVISSRSLAWTTIRGQAEEYEALRDLLSDVDALVDAEPTKPPLGTDAVAHSHPPSEPFIRAKRLFYRALLHFRYPCTTLPPVISRRWQSVFNPTSRATPDSALQEATHVAMERLRLWQSALQSLFFGYKRGHIDHFYVILPSTALLFSHAVVHNQPRPVRNGRSHHRRGTHSHSTTELTLRACFAKGSPGLRSLLSDYAVPFKIEHGSDRTGGETDPCVVAEGVLAVQAVYNFALAVGHKISNATDVPILLCDKPFRGGTAMSAQVTDVDETNVIDSHGGPTRLRYSVKVNGLLTPRQLTAICKAFVATQDHDYSVQLKTEPRSEMLNVSEHLIGQLNNIASGNSYQPPSTRVQGRRVLSRIVAAAGSRNFSLYTRAVE 539          
BLAST of Gcaud7907.t1 vs. uniprot
Match: R7QQV4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQV4_CHOCR)

HSP 1 Score: 276 bits (706), Expect = 2.680e-83
Identity = 198/529 (37.43%), Postives = 283/529 (53.50%), Query Frame = 0
Query:    2 SPPRKRPRTQ--PISAKRPPAAPRQSRSR--------PSLAD--EASRPRTLVDLLGATSSRAEQVLGDDAPNDAWSVLANTVDNLASDSRQPNPVPARDFDQV-----------QPPTGAEIQEPPHEHLPIDLSIKTLLTVVSSKSLWWTRVRGQGEEYEALHDLLSGVDALTEAHPAKPPIGSDA--------VIEGQV-LTEALTQAKRQFYRALLHFRYPCTTLPPVISRRWQAVFSSNARTR-PDSALQEATNVAMERLRLWQSALQSLFFGYKRGHIDHFYVLLPSTILLFSHTFAQNDNQNGTTRHKRRGQLRSTSDSTLHACF----AKGSLGLRSLLSDYAVPFRL-ERGSSPSGGESEPPVIAEGQLAVQAVYNFVLSVGHKISNATDVPLLLCDKPFRGGTAITAQVTDTDEANVIDSSGGATRLRYSVKIHGLLTPRQVRAVCRALVETQDRDFSVQMNTEERSETLNVCEQSVTLPPSNGTTSAQQKMSHAIQGHRVLSRVARHAPSPKFLLYTR 492
            SP RKRPRTQ      KRPP   R S  R         S+AD  EA+ P TL DL+G   SRAEQ LG++APN+ W+   NT+DN+ S S  P  +   D  +V           Q      + E   + +P+DL++K  + VVS  +L W   RGQG+EY AL  L +G  +        P   +D         V++ +  + E +   K+  Y+ALLHFR P  +LP VIS RWQ + S+  R    + AL +    A+ RL  WQSA QSL+FGY+ GHI  FYVLL +T +LF+    +     G+ + +R   + S+++    +CF    AK S GLR+L+S++ VPF L ER   PS  E +P V+ EG  A+ A++NF+LS G  ISNA DVPLL+CDKPFRG T  +A+V +  +  +    G     RY++++ GL TP Q+  VC +L + Q  +F+ + NT+E    LN          S+G  + + K+   ++G   LSRV   +    F + TR
Sbjct:   10 SPTRKRPRTQNSATKGKRPPLGNRHSNGRLSQIRVEMDSVADIREANMP-TLTDLIGGGRSRAEQFLGEEAPNNIWASFGNTLDNMGSLSNLPTVIGNDDASKVVYDADSRAFSEQLERDENVSERKFDQIPMDLTLKRKVDVVSKSTLRWALRRGQGDEYGALAKLTNGKSSTANDERQDPVSRNDRNRLEDDSNVLQARSNVDEDVLNWKKCLYKALLHFRCPGESLPKVISSRWQVLTSNYGRASWQEHALHDEKKFAVHRLINWQSAFQSLYFGYRHGHIPDFYVLLQTTTVLFN----RGKPWAGSKKRRRSTAMVSSANDNQSSCFRASVAKASTGLRALMSEHEVPFTLVER---PSSFE-DPGVVVEGDFAIHALFNFLLSRGPGISNADDVPLLVCDKPFRGSTIYSAEVLNARQMLIPGKPGEQPEHRYTMQLSGLFTPGQISDVCNSLAKIQRGEFAARFNTDEAGNMLNSFGHGG--DSSDGDEAEEDKLR--LRGPLFLSRVQMDSTQNGFSVTTR 525          
The following BLAST results are available for this feature:
BLAST of Gcaud7907.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHG6_9FLOR1.520e-22967.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQV4_CHOCR2.680e-8337.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availablePANTHERPTHR12972:SF0PROTEIN DOWNSTREAM NEIGHBOR OF SONcoord: 337..452
NoneNo IPR availablePANTHERPTHR12972:SF0PROTEIN DOWNSTREAM NEIGHBOR OF SONcoord: 21..319
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 21..319
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 337..452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_323_length_30158_cov_4.260851contigNODE_323_length_30158_cov_4.260851:16145..17632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7907.t1Gcaud7907.t1Gracilaria caudata M_176_S67 malemRNANODE_323_length_30158_cov_4.260851 16145..17632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7907.t1 ID=Gcaud7907.t1|Name=Gcaud7907.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=496bp
MSPPRKRPRTQPISAKRPPAAPRQSRSRPSLADEASRPRTLVDLLGATSS
RAEQVLGDDAPNDAWSVLANTVDNLASDSRQPNPVPARDFDQVQPPTGAE
IQEPPHEHLPIDLSIKTLLTVVSSKSLWWTRVRGQGEEYEALHDLLSGVD
ALTEAHPAKPPIGSDAVIEGQVLTEALTQAKRQFYRALLHFRYPCTTLPP
VISRRWQAVFSSNARTRPDSALQEATNVAMERLRLWQSALQSLFFGYKRG
HIDHFYVLLPSTILLFSHTFAQNDNQNGTTRHKRRGQLRSTSDSTLHACF
AKGSLGLRSLLSDYAVPFRLERGSSPSGGESEPPVIAEGQLAVQAVYNFV
LSVGHKISNATDVPLLLCDKPFRGGTAITAQVTDTDEANVIDSSGGATRL
RYSVKIHGLLTPRQVRAVCRALVETQDRDFSVQMNTEERSETLNVCEQSV
TLPPSNGTTSAQQKMSHAIQGHRVLSRVARHAPSPKFLLYTRAVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024861Donson