Gcaud7906.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7906.t1
Unique NameGcaud7906.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length195
Homology
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A2V3IHF8_9FLOR (Eukaryotic translation initiation factor 4E n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF8_9FLOR)

HSP 1 Score: 315 bits (806), Expect = 1.830e-107
Identity = 142/193 (73.58%), Postives = 165/193 (85.49%), Query Frame = 0
Query:    1 MAEENDQNDAGPHPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            MAEE  QN++  HPLQFKWTLWHDF + ++RNA+YAANLRPIASFDTVE+FWA+FNSLKEPS L S HTYNLFKFGI+PKWED QN DGGEWRVTF  S  + L+ CWINT+LTVIGEGFGP+ESDDIAG+VMNRKRG NR+AIWTKTA DE+LQ  IG RWRETS I +DQ +L+FKD IGT+K+ KP +T+
Sbjct:    1 MAEEQTQNESVSHPLQFKWTLWHDFPSPRTRNASYAANLRPIASFDTVEEFWAIFNSLKEPSHLQSLHTYNLFKFGIEPKWEDAQNKDGGEWRVTFTPSQHSPLNDCWINTVLTVIGEGFGPEESDDIAGVVMNRKRGNNRVAIWTKTAADEKLQRSIGTRWRETSGIIADQHYLRFKDLIGTNKRPKPHYTV 193          
BLAST of Gcaud7906.t1 vs. uniprot
Match: R7QP45_CHOCR (Translation initiation factor eIF4, subunit E, type 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP45_CHOCR)

HSP 1 Score: 258 bits (658), Expect = 6.080e-85
Identity = 115/196 (58.67%), Postives = 152/196 (77.55%), Query Frame = 0
Query:    1 MAEENDQNDAGP---HPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            M E    + +G    HPLQFKWTLWHD V      ++Y ANLR +ASFDTVEDFWAVFN+L EPS+LP N+TYNLFK+GI+PKWED QN +GGEWR+  PNS+   LDK W+NT+LTV+GEGFGP+ESDDI+GIV+N K G +RLAIWTK+A+  +LQ RIG+RW++T +IT + +++ FKD++G +++   R+ I
Sbjct:    1 MTENTSASKSGEQKTHPLQFKWTLWHDIV----NRSSYGANLREVASFDTVEDFWAVFNNLMEPSRLPRNNTYNLFKYGIEPKWEDKQNTNGGEWRLPLPNSYKDQLDKYWLNTLLTVLGEGFGPEESDDISGIVLNIKSGKDRLAIWTKSALSADLQMRIGQRWKKTVSITHEIEYISFKDAMGGARRGSSRYRI 192          
BLAST of Gcaud7906.t1 vs. uniprot
Match: Q7XZA0_GRIJA (Eukaryotic translation initiation factor p28 subunit (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZA0_GRIJA)

HSP 1 Score: 256 bits (653), Expect = 4.150e-84
Identity = 124/189 (65.61%), Postives = 150/189 (79.37%), Query Frame = 0
Query:   12 PHPLQFKWTLWHD-FVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAI-TSDQQFLQFKDSI-----GTSKKAKPRFTI 193
            PHPLQFKWTLWHD FV  K    AYAANLR +ASFDTVEDFWA+FN+LKEPSQL   +TYNLFK GI+PKWEDP N  GGEWRV+ P++    LD+ WINT+LTVIGEGFGP ESDDIAGIV+N KRG +R+AIWTKTA++E+LQ+RIG+RWRET+ I T   ++  FKDS+      ++KKA+ R+ I
Sbjct:   13 PHPLQFKWTLWHDVFVKGKG---AYAANLREVASFDTVEDFWALFNNLKEPSQLKPGNTYNLFKAGIEPKWEDPHNDAGGEWRVSLPSTRREVLDEYWINTVLTVIGEGFGPDESDDIAGIVLNIKRGNDRIAIWTKTALNEQLQDRIGKRWRETANIVTIRMEYTVFKDSLMATSKNSNKKARVRYLI 198          
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A1X6NJV7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJV7_PORUM)

HSP 1 Score: 182 bits (463), Expect = 4.060e-55
Identity = 92/193 (47.67%), Postives = 128/193 (66.32%), Query Frame = 0
Query:   11 GP-HPLQFKWTLWHD--FVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITS-----DQQFLQFKDSIG--TSKKAKPRFTI 193
            GP HPLQ++WTLW+D    A K+R A++  NL  + +F TVE+FWA+FN++ EPS L  +  Y+LFK GI PKWED  N +GG+W +  P S+   LD+ WI+T+LTVIGEGF    SDDIAG+V++ +R  +R+++WTKT+ DE +Q RIG  WR T+           ++L  KDSI   +S K K RF +
Sbjct:   16 GPTHPLQYRWTLWYDNSAAARKNRFASWDENLTKLMTFGTVEEFWALFNNILEPSHLAPSSNYHLFKEGIAPKWEDAANSEGGKWVLMNPPSYKERLDQYWIHTVLTVIGEGFEAPLSDDIAGLVLSTRRQADRISMWTKTSADEPMQKRIGEAWRATATPNGLHDNVQLEYLIHKDSIAKNSSYKNKARFVV 208          
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A2I4DSE0_JUGRE (mRNA cap-binding protein n=2 Tax=Juglans TaxID=16718 RepID=A0A2I4DSE0_JUGRE)

HSP 1 Score: 167 bits (423), Expect = 3.270e-49
Identity = 76/182 (41.76%), Postives = 119/182 (65.38%), Query Frame = 0
Query:   12 PHPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            PH L+ KWT W D  +   + AA+  +LR + +FDTVE+FW +++ +  PS+LP+N  ++LFK GI+PKWEDP+  +GG+W +  P+S  T LD  W+ T++ +IGE F   E+D+I G+V + +   ++LA+WTKTA +E +Q  IGR+W+E   +T D+    F D     + AK R+T+
Sbjct:   21 PHKLERKWTFWFDNQSKPKQGAAWGTSLRKLYTFDTVEEFWCLYDQIFRPSKLPANADFHLFKAGIEPKWEDPECANGGKWSI--PSSRKTNLDNMWLETLMALIGEQF--DEADEICGVVASVRPRQDKLALWTKTAANEAVQMSIGRKWKEIIDVT-DKMTYNFHDDSRRERTAKVRYTV 197          
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A6J1CB61_MOMCH (mRNA cap-binding protein n=9 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1CB61_MOMCH)

HSP 1 Score: 165 bits (418), Expect = 2.050e-48
Identity = 77/193 (39.90%), Postives = 125/193 (64.77%), Query Frame = 0
Query:    1 MAEENDQNDAGPHPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            +A+ N Q+    H L+ KWT W D  +   + AA+  +LR + +FDTVE+FW +++ + +PS+LP+N  ++LFK G++PKWEDP+  +GG+W VT  +S    LD  W+ T++ +IGE F  +ESD+I G+V + ++  ++LA+WTKTA +E  Q  IGR+W+E   +T D+    F + +   K AK R+ +
Sbjct:   17 VADSNQQS----HRLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVT--SSRKANLDNMWLETLMALIGEQF--EESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVT-DKITYSFHEDLRREKSAKSRYNV 200          
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A1U8AQF7_NELNU (mRNA cap-binding protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AQF7_NELNU)

HSP 1 Score: 164 bits (416), Expect = 3.320e-48
Identity = 81/198 (40.91%), Postives = 120/198 (60.61%), Query Frame = 0
Query:    1 MAEENDQNDAGP-----HPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            MA E  Q   G      H L+ KWT W D  +   + AA+  +LR I +FDTVE+FW +++ +  PS+ P+N  ++LFK GI+PKWEDP+  +GG+W VT  +S    LD  W+ T++ +IGE F   ESDDI G+V + ++  ++LA+WTKTA +E LQ  IGR+W+E   +T D+    F D     K  + R+ +
Sbjct:    1 MANEGGQEPTGAGSKQKHRLERKWTFWFDNQSKPKQGAAWGTSLRKIYTFDTVEEFWCLYDQIFRPSKFPANADFHLFKSGIEPKWEDPECANGGKWSVT--SSRKANLDNMWLETLMALIGEQF--DESDDICGVVASVRQRQDKLALWTKTATNEALQMSIGRKWKEIIDVT-DKITYSFHDDSRRDKSIRGRYNV 193          
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A6P8DTP5_PUNGR (mRNA cap-binding protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DTP5_PUNGR)

HSP 1 Score: 161 bits (408), Expect = 6.070e-47
Identity = 75/182 (41.21%), Postives = 118/182 (64.84%), Query Frame = 0
Query:   12 PHPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            PH L+ KWT W D  +   + AA+  +LR + +FDTVE+FW +++ + +PS+LP N  ++LFK G++PKWEDP+   GG+W VT  ++  + LD  W  T+L +IGE F   E+D+I G+V + ++  ++LA+WTKTA +E +Q  IGR+W+E   +T D+    F D     + AK R++I
Sbjct:   21 PHRLERKWTFWFDVQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFQPSRLPPNADFHLFKAGVEPKWEDPECASGGKWTVT--SNRKSQLDLMWRETLLALIGEQF--DEADEICGVVASVRQRQDKLALWTKTAANEAVQMSIGRKWKEILDVT-DKINYSFHDDSRRERSAKGRYSI 197          
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A6P6A6H4_DURZI (mRNA cap-binding protein n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6A6H4_DURZI)

HSP 1 Score: 161 bits (407), Expect = 9.690e-47
Identity = 74/182 (40.66%), Postives = 117/182 (64.29%), Query Frame = 0
Query:   12 PHPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            PH L+ KWT W D  +   + AA+  +LR + +FDTVE+FW +++ + +PS+LP N  ++LFK GI+PKWEDP+  +GG+W VT  +S    LD  W+ T++ +IGE F   E+D+I G+V + ++  ++LA+WTKTA +E  Q  IGR+W+E   + +D+    F D     + AK R+ +
Sbjct:   25 PHKLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPGNADFHLFKAGIEPKWEDPECANGGKWSVT--SSRKANLDNMWLETLMALIGEQF--DEADEICGVVASVRQRQDKLALWTKTATNEAAQMGIGRKWKEIIDV-NDKITYSFHDDSRRERSAKGRYNV 201          
BLAST of Gcaud7906.t1 vs. uniprot
Match: A0A8J4RN42_9ROSI (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A8J4RN42_9ROSI)

HSP 1 Score: 161 bits (407), Expect = 1.160e-46
Identity = 74/182 (40.66%), Postives = 118/182 (64.84%), Query Frame = 0
Query:   12 PHPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHTTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAMDEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTI 193
            PH L+ KWT W D  +   + AA+  +LR + +FDTVEDFW +++ + +PS+LP+N  ++LFK GI+PKWEDP+   GG+W +T  ++    LD  W+ T++ +IGE F   E+D+I G+V + ++  ++LA+WT+TA +E  Q  IGR+W+E   IT D+    F D     + AK R+++
Sbjct:   31 PHRLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEDFWCLYDQIFKPSKLPANADFHLFKAGIEPKWEDPECAAGGKWSIT--SNRKASLDTMWLETMMALIGEQF--DEADEICGVVASVRQRQDKLALWTRTAANEATQMSIGRKWKEIIDIT-DKITYSFHDDSKRERSAKSRYSV 207          
The following BLAST results are available for this feature:
BLAST of Gcaud7906.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHF8_9FLOR1.830e-10773.58Eukaryotic translation initiation factor 4E n=1 Ta... [more]
R7QP45_CHOCR6.080e-8558.67Translation initiation factor eIF4, subunit E, typ... [more]
Q7XZA0_GRIJA4.150e-8465.61Eukaryotic translation initiation factor p28 subun... [more]
A0A1X6NJV7_PORUM4.060e-5547.67Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2I4DSE0_JUGRE3.270e-4941.76mRNA cap-binding protein n=2 Tax=Juglans TaxID=167... [more]
A0A6J1CB61_MOMCH2.050e-4839.90mRNA cap-binding protein n=9 Tax=Cucurbitaceae Tax... [more]
A0A1U8AQF7_NELNU3.320e-4840.91mRNA cap-binding protein n=1 Tax=Nelumbo nucifera ... [more]
A0A6P8DTP5_PUNGR6.070e-4741.21mRNA cap-binding protein n=3 Tax=Punica granatum T... [more]
A0A6P6A6H4_DURZI9.690e-4740.66mRNA cap-binding protein n=1 Tax=Durio zibethinus ... [more]
A0A8J4RN42_9ROSI1.160e-4640.66Uncharacterized protein n=3 Tax=Fagaceae TaxID=350... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 14..173
e-value: 4.9E-47
score: 159.7
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 3..168
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 2..193
e-value: 1.1E-55
score: 190.1
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 8..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_323_length_30158_cov_4.260851contigNODE_323_length_30158_cov_4.260851:14435..15123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7906.t1Gcaud7906.t1Gracilaria caudata M_176_S67 malemRNANODE_323_length_30158_cov_4.260851 14435..15123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7906.t1 ID=Gcaud7906.t1|Name=Gcaud7906.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=195bp
MAEENDQNDAGPHPLQFKWTLWHDFVASKSRNAAYAANLRPIASFDTVED
FWAVFNSLKEPSQLPSNHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSH
TTYLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGTNRLAIWTKTAM
DEELQNRIGRRWRETSAITSDQQFLQFKDSIGTSKKAKPRFTIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like