Gcaud7902.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7902.t1
Unique NameGcaud7902.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1081
Homology
BLAST of Gcaud7902.t1 vs. uniprot
Match: A0A2V3IHK8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHK8_9FLOR)

HSP 1 Score: 1286 bits (3329), Expect = 0.000e+0
Identity = 693/1079 (64.23%), Postives = 831/1079 (77.02%), Query Frame = 0
Query:    1 MRLSAATSLRVNHALRAACGGSLIALLSLATAVSPGCLTSVVFFICVIAGTPHNLQGFQLRCASLTFLGAILGISAYTLVHLIAATSSIGTFFATFPFIVLFSALRTEPKLTPLPPVANVLLGFLTISRFPTPISALTDILPNSLIDVTLGWFVANLVNLFFADRASDEGRRIVAAELRNLGAHISTIATNTFSQSAQ-PQSSLSFTHSHHISLLIDPRPPTLSSTSHQPHYLFETAHASRRTLNLTQVDRTEHMTAAAYASLNFFRELPPLGRTRVHNFSNLAAAARLFEASSFEPSLISPTISRWRNANAWKQLVNDLQALVAKVASLESVACGIDGGSRFSPAHIASLFGEAFFPLWVAHYAACSXXXXXXXXXXXXXXXKDMFHLNDNIAGDYLLHHDIDPRKWKTRRAEMYAGFLSKYRLRIRTFSSTAFPSHPTIADFRTAHLNTGNPKSIALDNGNYCRRVSQEDKRTSSVSVAGEAETSADRSEDDENTVFNDAQQSRDSSSLSMSKLQALSFFGVTSHAMSEEIAHVQKSMVTLASSTDARGVFAPFRFIIAGVPILFERVKKLVRRDVETWEVRFMITHSFLLLVILALALFLPIRETFEASEIAWVFTSAALAAQLSAEPTLFIGAIRVVASITGGLQAFGFNSFLDAIGRKENFELNYLIVPYVFFTTLLSLLVLPPKYRYAAFLNIVTNFVLLFCPRATEECNHVLTQQTSECFPDWQYAISRAVNVSIGVVFAVAFHLLFWPRYANQVALRTLSSAFINAVRLLGKLRRTYFSFGLDPEGSRLPKNK-RRSTGPTDFGRRLMNEGDIYRREEKMMKEIQRRLSDLVSFAALTVKMEAGVWEKGPLRLSPLLPHLLNDFIALDISLKEMASLLGRSPIFSGSYGPSVYRHFIRPLLPIYETIQISLNNLVGLTQRGLLDSKAEETHLRELAFDLHQGLTHLARIRSKLRSRAAHRRECFVRSMNQTLRLTTERSFFVEGAGRRFSWSDAADSPGHTPLSPPRRASTDGNGIETKSSSNELCVDDVVLYNAFSFIADGCLSAFVRIAAAILSDMESKIEACRTRRRK 1077
            M LS  T LR+ HALRAA GGS+IALLSLAT +S GCL SVVFFI VIA TP NLQGFQLR ASLTFLGA+LGI+AY+LVHLIA+TS+IGTFFA  PFIV FSALR  P LTPLPPVANVLLG LTIS+FP+ ISAL  ++P +LIDVT  + VAN+VNL FADRASD GRRIVA ELRNLGAHIS IAT TFSQ  Q PQ +   + S H++L +D       S+ H+ HYLF T HAS  + +   ++RTE M A A+ASL++ ++LPPL RTRV NFSNLA AAR F AS+FEP LI PTISRWRNA+ WK+LVNDLQ L++KVASLESVA   +   RF    +  LFGEAFFPLWVAHYAACS               +DMFHL+D +   +LLH +IDPRKWK RRAEMY+GFL +YR R+   ++    SH ++ADFR     +    S    +G   ++ +++ +       + ++E          +++F   Q+    S LSM++ QALSFFG+TSHA+SEEI HVQ SMV LASSTDARG+FAPF F+++ +P+L +RVK LVR DV+ WEVRF+ THS LLLVILALALFLP+R+TFEASEIAWVFTSAALAAQLSAEPTLFIGAIRVVA++TGG+ AFGFNS LDA+GRKE+ ELNY+IVPYVF TT++SL+VLP K+RYA+FLNIVTN VLLFCPRATEECN VL QQT++CFPDWQYAISRA NVSIGVVFA+ FHLLFWPR+ANQVALRTLS AF+N+VRLLGKLRRTYFS+GL     RL K   RR    +   R ++NEGD+YRR+E +MKEIQ RLSD +SFAALTVK+EAGVW+ GPLRLSPLLP LLNDFIAL++SLKEMASLLGR PIFSGSYGPSVYRHFIRPLLPIYETIQ+S +NL GL +RG+++ KA E +L+EL FDLHQ +THLAR+RS+LRSRAA R E F  SM++++RL+ E+SFF+E   RRFSWS++   P    ++ P R STDGN I  +    ELC+DD+VLY+AF FIAD CLSAFVRIAA +L D E+KIE  R + RK
Sbjct:    1 MPLSDTTLLRLRHALRAASGGSIIALLSLATNISAGCLPSVVFFISVIAATPENLQGFQLRSASLTFLGAVLGITAYSLVHLIASTSAIGTFFAAIPFIVFFSALRPNPHLTPLPPVANVLLGLLTISQFPSSISALKQVVPAALIDVTFAYIVANVVNLAFADRASDAGRRIVARELRNLGAHISRIATQTFSQPQQHPQHNSFHSTSDHLTLFMDRGHRDTLSSLHEQHYLFRTKHASHASHH--HLERTELMQAEAHASLHYLKQLPPLSRTRVENFSNLAIAARFFSASTFEPCLIRPTISRWRNASTWKKLVNDLQVLMSKVASLESVAMQTESRPRFYAEQLCELFGEAFFPLWVAHYAACSAACASMSTAMYHATCRDMFHLDDTVHDGFLLHPNIDPRKWKNRRAEMYSGFLMRYRHRMTAVAAREIHSHASVADFRNVEGRSTWSTSGRQHHGGTTQQYARQSRSVEKDITSSDSEY---------DSLFTTQQKRPSGSKLSMAQRQALSFFGITSHALSEEIGHVQLSMVELASSTDARGLFAPFYFVVSSIPLLVKRVKDLVRGDVQAWEVRFVFTHSTLLLVILALALFLPLRDTFEASEIAWVFTSAALAAQLSAEPTLFIGAIRVVATVTGGVLAFGFNSLLDALGRKEHDELNYIIVPYVFVTTVVSLMVLPTKFRYASFLNIVTNTVLLFCPRATEECNQVLGQQTTQCFPDWQYAISRAANVSIGVVFALVFHLLFWPRFANQVALRTLSEAFVNSVRLLGKLRRTYFSYGLQTARLRLRKGSIRRPVVASSVKRVILNEGDLYRRDESVMKEIQCRLSDRISFAALTVKLEAGVWKTGPLRLSPLLPRLLNDFIALEVSLKEMASLLGRCPIFSGSYGPSVYRHFIRPLLPIYETIQVSCSNLAGLVERGMVERKASERYLKELVFDLHQAITHLARVRSQLRSRAARRLERFEFSMSESMRLSAEQSFFLESEERRFSWSESLIEPERRLVTSPERISTDGNRILGRHVPKELCIDDIVLYSAFCFIADVCLSAFVRIAAELLVDSETKIEELRGKTRK 1068          
BLAST of Gcaud7902.t1 vs. uniprot
Match: R7QMX1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX1_CHOCR)

HSP 1 Score: 552 bits (1422), Expect = 4.130e-181
Identity = 308/589 (52.29%), Postives = 413/589 (70.12%), Query Frame = 0
Query:  500 DAQQSRDSSSLSMSKLQALSFFGVTSHAMSEEIAHVQKSMVTLASSTDARGVFAPFRFIIAGVPILFERVKKLVRRDVETWEVRFMITHSFLLLVILALALFLPIRETFEASEIAWVFTSAALAAQLSAEPTLFIGAIRVVASITGGLQAFGFNSFLDAIGRKENFELNYLIVPYVFFTTLLSLLVLPPKYRYAAFLNIVTNFVLLFCPRATEECNHVLTQQTSECFPDWQYAISRAVNVSIGVVFAVAFHLLFWPRYANQVALRTLSSAFINAVRLLGKLRRTYFSFGLDPEGSRLPKNKRRSTGPTDFGRR--LMNEGDIYRREEKMMKEIQRRLSDLVSFAALTVKMEAGVWEKGPLRLSPLLPHLLNDFIALDISLKEMASLLGRSPIFSGSYGPSVYRHFIRPLLPIYETIQISLNNLVGLTQRGLLDSKAEETHLRELAFDLHQGLTHLARIRSKLRSRAAHRRECFVRSMNQTLRLTTERS--FFVEGAGRRFSW-----SDAADSPGHTPLSPPRRASTDGNGIETKSSSNELCVDDVVLYNAFSFIADGCLSAFVRIAAAILSDMESKIEACRTRRRKKK 1079
            DA ++  ++  S  ++QALS+F +TSHA+SEEI+HVQ++MV LA+++DARG+ APF F+++G+P L+ R+K L + +V  WE++F  THS LL  ILAL+LFLPI    E SEIAWV+TSAALAAQLSAEPTLFIG IRV+A+ITG    FGF S LDA+GR ++  + YL +PY+F  T++ LL++PP YRYAAFL I TN +++FCPR+T EC  VL +Q+  CFPDW+YA+SR+ NV++GVVFA+ FHL+FWPRYANQVALR LS+AF+++ RL GKL RTYFS+GL P GS  P  +      T + R   L+NE D+Y++++ ++ EI  ++   ++ A L VK EA VW+ GP RL PL+P +L+DF+AL +SL EMASLLGR PI+S SYG SV+ HFI P+L +YETIQISLNNLVG+T R +  +K +ET  RE +FDLH  +THLARIR KLR  AA R   F       ++LT  +   F   G     S+      D   +      S PR  S +      K+    LCVDDVVLY+AF+FI D CLSAFVRIA A+L D E+ ++  + RR+++K
Sbjct:   46 DAFEANSAAVKSKVEVQALSYFALTSHALSEEISHVQQAMVELAATSDARGLLAPFYFVVSGLPPLWRRIKALAKGNVRGWEIKFACTHSMLLTSILALSLFLPISRI-EESEIAWVYTSAALAAQLSAEPTLFIGTIRVLATITGAGIGFGFTSILDAMGRSDHSAIQYLAIPYMFIMTIVCLLLVPPAYRYAAFLVIATNAIIIFCPRSTPECTRVLEKQSESCFPDWKYALSRSTNVALGVVFAMFFHLIFWPRYANQVALRYLSAAFLSSSRLFGKLHRTYFSYGL-PSGSGSPDLE----PSTSYARGDLLLNE-DVYQKDQSVLDEIISKVGCPLADAMLLVKSEADVWQAGPFRLDPLIPRVLSDFVALSVSLVEMASLLGRRPIYSSSYGRSVFEHFIHPMLGVYETIQISLNNLVGITDRTVAGNKEQET--RENSFDLHHAITHLARIRGKLRRDAAKR--SFEFQKFSAIQLTRRKPCRFSRHGNAADDSYVDLVFQDLGLAKQTRDASYPRARSHNETNRACKTDEQRLCVDDVVLYDAFTFITDTCLSAFVRIAVAVLIDSEANLKRMKERRQEEK 623          
BLAST of Gcaud7902.t1 vs. uniprot
Match: A0A1X6NNB3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNB3_PORUM)

HSP 1 Score: 115 bits (287), Expect = 2.200e-22
Identity = 98/332 (29.52%), Postives = 153/332 (46.08%), Query Frame = 0
Query:  611 SEIAWVFTSAALAAQLSAEPTLFIGAIRVVASITGGLQAFGFNSFLDAIGRKENFE--LNYLIVPYVFFTTLLSLLVLPPKYRYAAFLNIVTNFVLLFCPRATEECNHVLTQQTSE---------CFPDWQYAISRAVNVSIGVVFAVAFHLLFWPRYANQVALRTLSSAFINAVRLLGKLRRTYFSFGLD--------------PEGSRLPKN--KRRSTGPTDFGRRLM----NEGDIYRREEKMMKEIQRRLSDLVSFAALTVKMEAGVWEKGPLRL-----SPLLPHLLNDFIALDISLKEMASLLGRSPIFSGSYGPSVYRHFIRPL 906
            SE AW++ SAALAAQ S E T+FIG +RVVAS  G   A+ F+     +   +      +  +V Y+      +L  +P ++R+AAFL +V+N ++   PR+T  C                   C P   YA+SRAV+V++G + A+A H L  PR+A   A  +L+ A   AV +  KL ++Y  F  +              P G     +    RS  P    + ++    +  D Y     +   +   +   +  A   +  E G W+ GP        + L+PH    F AL  ++ E+A +L R P+ +G+Y  S +R FI PL
Sbjct:  100 SETAWIYCSAALAAQASVEATVFIGGLRVVASAVGSATAYLFHLLTGPLFGPDGQHGVHDAALVAYMAAFAFATLAGMPSRFRHAAFLTVVSNSIVALGPRSTGACAAARDAAAGAGKAAGMAVACAPSAGYAVSRAVHVALGALAAMASHTLLLPRFAGVDARLSLADAAAGAVGMYAKLYQSYLDFDENDAXXXXXXXXXXDSPPGLHRTTSVDSLRSLAPPSASKGVVAVDIDAADTYA-WNSLAPGVAAAVEGHLLRATTMLNKETGGWQGGPFARPMAHNAALVPH----FRALMHAVGELAVVLERRPVLTGAYTRSAHRLFIEPL 426          
The following BLAST results are available for this feature:
BLAST of Gcaud7902.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IHK8_9FLOR0.000e+064.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMX1_CHOCR4.130e-18152.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NNB3_PORUM2.200e-2229.52Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1000..1022
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..503
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 687..691
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 732..755
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 584..604
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 756..760
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 692..711
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 712..731
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 163..583
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..162
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 605..631
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 632..655
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 656..666
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 761..778
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 779..1080
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 667..686
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..83
NoneNo IPR availableTMHMMTMhelixcoord: 552..569
NoneNo IPR availableTMHMMTMhelixcoord: 669..686
NoneNo IPR availableTMHMMTMhelixcoord: 634..656
NoneNo IPR availableTMHMMTMhelixcoord: 732..754
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 582..604

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_323_length_30158_cov_4.260851contigNODE_323_length_30158_cov_4.260851:3603..6845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7902.t1Gcaud7902.t1Gracilaria caudata M_176_S67 malemRNANODE_323_length_30158_cov_4.260851 3603..6845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7902.t1 ID=Gcaud7902.t1|Name=Gcaud7902.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1081bp
MRLSAATSLRVNHALRAACGGSLIALLSLATAVSPGCLTSVVFFICVIAG
TPHNLQGFQLRCASLTFLGAILGISAYTLVHLIAATSSIGTFFATFPFIV
LFSALRTEPKLTPLPPVANVLLGFLTISRFPTPISALTDILPNSLIDVTL
GWFVANLVNLFFADRASDEGRRIVAAELRNLGAHISTIATNTFSQSAQPQ
SSLSFTHSHHISLLIDPRPPTLSSTSHQPHYLFETAHASRRTLNLTQVDR
TEHMTAAAYASLNFFRELPPLGRTRVHNFSNLAAAARLFEASSFEPSLIS
PTISRWRNANAWKQLVNDLQALVAKVASLESVACGIDGGSRFSPAHIASL
FGEAFFPLWVAHYAACSAACAAMSNAMCNATCKDMFHLNDNIAGDYLLHH
DIDPRKWKTRRAEMYAGFLSKYRLRIRTFSSTAFPSHPTIADFRTAHLNT
GNPKSIALDNGNYCRRVSQEDKRTSSVSVAGEAETSADRSEDDENTVFND
AQQSRDSSSLSMSKLQALSFFGVTSHAMSEEIAHVQKSMVTLASSTDARG
VFAPFRFIIAGVPILFERVKKLVRRDVETWEVRFMITHSFLLLVILALAL
FLPIRETFEASEIAWVFTSAALAAQLSAEPTLFIGAIRVVASITGGLQAF
GFNSFLDAIGRKENFELNYLIVPYVFFTTLLSLLVLPPKYRYAAFLNIVT
NFVLLFCPRATEECNHVLTQQTSECFPDWQYAISRAVNVSIGVVFAVAFH
LLFWPRYANQVALRTLSSAFINAVRLLGKLRRTYFSFGLDPEGSRLPKNK
RRSTGPTDFGRRLMNEGDIYRREEKMMKEIQRRLSDLVSFAALTVKMEAG
VWEKGPLRLSPLLPHLLNDFIALDISLKEMASLLGRSPIFSGSYGPSVYR
HFIRPLLPIYETIQISLNNLVGLTQRGLLDSKAEETHLRELAFDLHQGLT
HLARIRSKLRSRAAHRRECFVRSMNQTLRLTTERSFFVEGAGRRFSWSDA
ADSPGHTPLSPPRRASTDGNGIETKSSSNELCVDDVVLYNAFSFIADGCL
SAFVRIAAAILSDMESKIEACRTRRRKKKD*
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