Gcaud7877.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7877.t1
Unique Name	Gcaud7877.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	347

Homology

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BLAST of Gcaud7877.t1 vs. uniprot
Match: A0A2V3J143_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J143_9FLOR)

HSP 1 Score: 521 bits (1343), Expect = 2.850e-184
Identity = 291/347 (83.86%), Postives = 314/347 (90.49%), Query Frame = 0

Query:    1 MKFTSSSVERPRRSIQTALPMRRRITSQPSSPDPPAYPTVTRWASAARRPTSLSDSPTARDVSYSSVALRHSNSSTDRRSTLQPSLSLPPPHTNLRPAAQRTHSLHTSPPRESIQRQATLKRSDSLLQRARRVFSLPASMRRRT-REFVPPPDNLRRRPRTSNTNDRFENLAAADYIPRPRNSFTAAARRVTERY-RRKESLQEDPRPTTAELTAAQERISALENELELERVRSSRARRRVRELEQQTITCRHAIPAVESIIKSALAQFEAKENALRHTITRMDQEYAALLAEKKEAVRLLNAFVGRGSRSPPPSSFSSVSDGSESVRERRALSLDAIRRAKASSAE 345
            MKF+SS+VER      ++  MRRR+ SQPSSPDPPAYPTVTRWAS ARRPTSLSDSPTARDVSYSSVALRHSNSSTDRR+ + PS+SLPP HTNLRP+AQRTHSLHT PPRESIQRQATLKRSDSLLQRARRVFSLP+S+RRRT REFVPPPDNLRRRPRT++  DRFENLAAADYIPRPRNSF AAARRVTERY RRKE LQE+  PT A+LTAAQERISALENELELER+RSSRARRRVRELEQQTI CRHAIPAVE+IIKSALAQF+AKE ALRHTI+RMD EYA LLAEKKEAVRLLNAFVGRG+RSPPPSSFSSVSDGS+ V+ERRA SLD IRR K S +E
Sbjct:    1 MKFSSSAVERSPNPAPSSQ-MRRRLASQPSSPDPPAYPTVTRWASTARRPTSLSDSPTARDVSYSSVALRHSNSSTDRRN-ITPSISLPPQHTNLRPSAQRTHSLHTDPPRESIQRQATLKRSDSLLQRARRVFSLPSSLRRRTTREFVPPPDNLRRRPRTTSATDRFENLAAADYIPRPRNSFGAAARRVTERYHRRKEPLQEEHHPTAAQLTAAQERISALENELELERIRSSRARRRVRELEQQTIACRHAIPAVETIIKSALAQFDAKEAALRHTISRMDHEYATLLAEKKEAVRLLNAFVGRGTRSPPPSSFSSVSDGSDGVKERRAYSLDTIRRGKPSFSE 345

The following BLAST results are available for this feature:

BLAST of Gcaud7877.t1 vs. uniprot

BLAST of Gcaud7877.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J143_9FLOR	2.850e-184	83.86	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 211..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1714_length_8869_cov_3.836523	contig	NODE_1714_length_8869_cov_3.836523:4973..6013 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7877.t1	Gcaud7877.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1714_length_8869_cov_3.836523 4973..6013 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7877.t1 ID=Gcaud7877.t1|Name=Gcaud7877.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=347bp
MKFTSSSVERPRRSIQTALPMRRRITSQPSSPDPPAYPTVTRWASAARRP
TSLSDSPTARDVSYSSVALRHSNSSTDRRSTLQPSLSLPPPHTNLRPAAQ
RTHSLHTSPPRESIQRQATLKRSDSLLQRARRVFSLPASMRRRTREFVPP
PDNLRRRPRTSNTNDRFENLAAADYIPRPRNSFTAAARRVTERYRRKESL
QEDPRPTTAELTAAQERISALENELELERVRSSRARRRVRELEQQTITCR
HAIPAVESIIKSALAQFEAKENALRHTITRMDQEYAALLAEKKEAVRLLN
AFVGRGSRSPPPSSFSSVSDGSESVRERRALSLDAIRRAKASSAEA*