Gcaud7871.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7871.t1
Unique Name	Gcaud7871.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	529

Homology

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BLAST of Gcaud7871.t1 vs. uniprot
Match: A0A2V3IIE9_9FLOR (Muscle M-line assembly protein unc-89 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIE9_9FLOR)

HSP 1 Score: 206 bits (523), Expect = 1.440e-56
Identity = 245/561 (43.67%), Postives = 278/561 (49.55%), Query Frame = 0

Query:    1 MAAVGLSNLPWWTSDADVEALCARAHSPARRAIAHVRFAVDPACGKSLGRVAVALSSPDLAEPLRAALSKDPPEPASSAT--PVAVCVLPPADVGAFLYPPEFKRP-------SPPPSNFAGHMPPFPPRSMFPPAMXXXXXXXXXXXXXPPPGFMPHPFMWLPPNPSQQQRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHHDAPAQHDA-----RRSPSPRAAARSRRSRSPSH--------SPPXPSEHSPRRSSPXXXSSPRRSPXXXXSRSHRRHSPQPDTERARSRRSKGRETLIINKYGDRVLVYRPDHDNEDSRRRSTSRRAARDSSDEFE-TTAKLNIPEEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPFNGSSRRRSRSHS--PDWSDDHRSSKRRRHGHYESTQWDRG--------SDSAKHDDTAGKSRADXXXXXXXXXXXXXXGRSRRRAHANANQQGSSSVADKADLPSDRRNSRRQRSTRR 528
            MAAV LSNL WWT+DA+V+AL  RAH+ A RA+  VRFA   A GKSLGRVA+ALS+ DLAEPLRAAL+   P         PV   VLPP  V AFL       P       + P       MPPFPPR +FP  +             PPP FMP PFMWLPPNPSQQQ                                                             P   AP Q  A     R+ PSPRA ++S  SR            SPP P+ H+ RRS       PRR  XXXX                  RR+ GRETL+INKYG+RVLV+RPD+DNE+ RR+STSRR  R+SSDE++ +TAKLNIPEEVKXXXXXXXXXXX                        XXXXXXXXXXXXXXXXXXXXX                 P+WSDD R+SKRR                     S S KHDD   KSR                GRSRRRAH+NANQQ  +S ADK+D+ SDRRNSRRQRS RR
Sbjct:    1 MAAVALSNLGWWTTDAEVDALVQRAHAAAHRALTDVRFATHAASGKSLGRVAIALSAADLAEPLRAALAALHPXXXXXXADLPVVAAVLPPDHVDAFLXXXXXXSPVAAXXXXAAPRFPHHAAMPPFPPR-IFPHTLPMPRGI-------PPPAFMP-PFMWLPPNPSQQQA------------------------------------------------------------PRPAAPEQQRAHAPPQRQLPSPRAPSKSPSSRXXXXXXXXXSDASPPRPAPHNRRRS-------PRRXXXXXXXXXXXXXXXXXXXXXXXXRRAAGRETLLINKYGERVLVFRPDNDNEEVRRKSTSRRTTRESSDEYDDSTAKLNIPEEVKXXXXXXXXXXXHSRHARSPDRSVSPPRFSPERDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEWSDDRRASKRRXXXXXXXXXXXXXXXXXXXATSVSPKHDDMPSKSRP-GEDDEPPRRARKRGGRSRRRAHSNANQQNCASAADKSDIQSDRRNSRRQRSGRR 484

The following BLAST results are available for this feature:

BLAST of Gcaud7871.t1 vs. uniprot

BLAST of Gcaud7871.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IIE9_9FLOR	1.440e-56	43.67	Muscle M-line assembly protein unc-89 n=1 Tax=Grac...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..484
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 495..509
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..219

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1238_length_12255_cov_4.374630	contig	NODE_1238_length_12255_cov_4.374630:7436..9022 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7871.t1	Gcaud7871.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1238_length_12255_cov_4.374630 7436..9022 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7871.t1 ID=Gcaud7871.t1|Name=Gcaud7871.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=529bp
MAAVGLSNLPWWTSDADVEALCARAHSPARRAIAHVRFAVDPACGKSLGR
VAVALSSPDLAEPLRAALSKDPPEPASSATPVAVCVLPPADVGAFLYPPE
FKRPSPPPSNFAGHMPPFPPRSMFPPAMPPPMPPNLPPGMPPPPGFMPHP
FMWLPPNPSQQQRQQQQQRQQPPPRQQPPRQQQQPRQQQPPRQQQPPRQQ
QPPRQQQPHPQQQRPQQQAAPDRPHHDAPAQHDARRSPSPRAAARSRRSR
SPSHSPPPPSEHSPRRSSPRRASSPRRSPRRSPSRSHRRHSPQPDTERAR
SRRSKGRETLIINKYGDRVLVYRPDHDNEDSRRRSTSRRAARDSSDEFET
TAKLNIPEEVKERLRERMQNERHSQHNRSSERSPSPRRFSPERERQRDRD
RGRDRHRDRRRERTRERSPFNGSSRRRSRSHSPDWSDDHRSSKRRRHGHY
ESTQWDRGSDSAKHDDTAGKSRADDEEPPPTRRPRKRGGRSRRRAHANAN
QQGSSSVADKADLPSDRRNSRRQRSTRR*