Gcaud7859.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7859.t1
Unique NameGcaud7859.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length241
Homology
[Close]
BLAST of Gcaud7859.t1 vs. uniprot
Match: A0A2V3IE32_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE32_9FLOR)

HSP 1 Score: 194 bits (494), Expect = 1.300e-58
Identity = 115/226 (50.88%), Postives = 145/226 (64.16%), Query Frame = 0 
Query:   13 VPLAFHAAASRWARGQATAEDHAAMCALSMHQPLAPAFDAIKLGFDVETRLPPAHALPLFDDVKNQARAQFHADAALQARCALERAVLHPTKCAFPHALGALPAAAGLAVAARLGVGKRFCVSWTVEAAALEAAGIDFVGAAFGAGFAPQFDVEDPTKVSFISRISISDTALRHLEYQLRRVNR-EHVLPAGTAALTDIVRQP--DDEDDEFNCADLLAFRGSALF 235
            VP AF AAA+RWA G A+AED AAM +++   PL   FDA++LGFD  TRLP A ALPLF+ VKN AR  FH   A   + A+ +A+  P    FP  L A PA  GLA AA+LG+ +  CV WTV  A LE+AG+ F+GAA  AGF P  DVE   +V F SR  +SD+ALR L  +L   +  EHVLP G A+LT + R    DD+DD+F+C  LL+F G+A F
Sbjct:   14 VPAAFRAAAARWASGTASAEDTAAMLSVTAQTPLPSTFDALRLGFDPHTRLPTAAALPLFNAVKNDARTAFHVSLADTNQRAILKAINSPIPAPFPSGLHAAPARRGLAAAAKLGLYRTTCVQWTVSRAVLESAGVHFIGAAHEAGFEPSIDVEGLEQVLFTSRPQVSDSALRRLYDELMDDDFVEHVLPPGAASLTHLPRAQLEDDDDDDFDCTQLLSF-GAATF 238
The following BLAST results are available for this feature:
BLAST of Gcaud7859.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IE32_9FLOR1.300e-5850.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_354_length_28917_cov_4.522861contigNODE_354_length_28917_cov_4.522861:9930..10652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7859.t1Gcaud7859.t1Gracilaria caudata M_176_S67 malemRNANODE_354_length_28917_cov_4.522861 9930..10652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7859.t1 ID=Gcaud7859.t1|Name=Gcaud7859.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=241bp
MRLRDGTHGSSPVPLAFHAAASRWARGQATAEDHAAMCALSMHQPLAPAF
DAIKLGFDVETRLPPAHALPLFDDVKNQARAQFHADAALQARCALERAVL
HPTKCAFPHALGALPAAAGLAVAARLGVGKRFCVSWTVEAAALEAAGIDF
VGAAFGAGFAPQFDVEDPTKVSFISRISISDTALRHLEYQLRRVNREHVL
PAGTAALTDIVRQPDDEDDEFNCADLLAFRGSALFSQSKL*
back to top