Gcaud7855.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7855.t1
Unique NameGcaud7855.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length233
Homology
[Close]
BLAST of Gcaud7855.t1 vs. uniprot
Match: A0A2V3IEI0_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEI0_9FLOR)

HSP 1 Score: 205 bits (522), Expect = 8.290e-64
Identity = 125/192 (65.10%), Postives = 146/192 (76.04%), Query Frame = 0 
Query:   51 MKSLQKKKRYTEDLEHRAVALASRNRELRDKIRLLLARLQQMGIVAVPGVGVVFSPSAVQTPYQNVQPSPAPAQPTNSSAPIVPPDWSVDFSTPAPVSASPAPSASAPALTMPDSLQSATEVA------NPTA--TSLPQDD--LSAMMNQSLPIVGTPPTSPALALQPDLFSLPESEPKLGVFDIPHMTCQ 232
            MKSLQKKKRYTEDLEHRAVALA+RN+ELRD+IR+LL RLQQMGIVAVPGVG VFSPSA+QTPY +VQP+  PA P ++SAPIVPPDW V             PS SA +L +P+SL +A  VA      NPT    +LPQ +   +AM+NQSLP++ TPP SP+LALQPD FSL +SE KLGVFDIPHMTCQ
Sbjct:    1 MKSLQKKKRYTEDLEHRAVALATRNQELRDRIRVLLGRLQQMGIVAVPGVG-VFSPSALQTPYPSVQPTATPAPPPSASAPIVPPDWPVHLDN--------QPSVSAQSLQLPESLPTAAPVATAATAPNPTPIPATLPQHNNASAAMLNQSLPLLETPPQSPSLALQPDPFSLSDSEHKLGVFDIPHMTCQ 183
The following BLAST results are available for this feature:
BLAST of Gcaud7855.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEI0_9FLOR8.290e-6465.10BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableGENE3D1.20.5.170coord: 38..91
e-value: 1.3E-6
score: 29.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableCDDcd14687bZIP_ATF2coord: 39..92
e-value: 1.70854E-12
score: 58.694
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 38..91
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 34..97
e-value: 5.1E-5
score: 32.7
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 34..85
e-value: 1.1E-8
score: 35.0
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 36..92
score: 9.817727

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_354_length_28917_cov_4.522861contigNODE_354_length_28917_cov_4.522861:1543..2241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7855.t1Gcaud7855.t1Gracilaria caudata M_176_S67 malemRNANODE_354_length_28917_cov_4.522861 1543..2241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7855.t1 ID=Gcaud7855.t1|Name=Gcaud7855.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=233bp
TVLPSTPTTPGPLSPLSASKKLKGGRRVVNPHLTDEQRRRERVLKNRESA
MKSLQKKKRYTEDLEHRAVALASRNRELRDKIRLLLARLQQMGIVAVPGV
GVVFSPSAVQTPYQNVQPSPAPAQPTNSSAPIVPPDWSVDFSTPAPVSAS
PAPSASAPALTMPDSLQSATEVANPTATSLPQDDLSAMMNQSLPIVGTPP
TSPALALQPDLFSLPESEPKLGVFDIPHMTCQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP