Gcaud7851.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7851.t1
Unique NameGcaud7851.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length237
Homology
BLAST of Gcaud7851.t1 vs. uniprot
Match: R7QHD3_CHOCR (Sodium-dependent transporter n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHD3_CHOCR)

HSP 1 Score: 316 bits (809), Expect = 5.250e-104
Identity = 166/211 (78.67%), Postives = 183/211 (86.73%), Query Frame = 0
Query:   26 AIASEDSPSLSERPRTTFRENVWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKYCNAPV 236
            ++ASE   S    P   F   VWN YVR+ST++TNLFP+WTVL+ALSAL +PALYTWLTTPYFT SLG+LMLSMGITLS+DDF+RV RRFGAV IGFMGCY++MP LAL LAK+FNL P+LAAG ILVGAVNGGQASNLCTYIANGNVALSVMMTT TTLGAIVMTPLISK LIGAV+PVNAVGIAWSTIQVVLFPIALGM LN+Y N  V
Sbjct:   55 SLASESDDSSISSPTNPFISRVWNLYVRLSTILTNLFPLWTVLAALSALWKPALYTWLTTPYFTLSLGVLMLSMGITLSVDDFRRVFRRFGAVAIGFMGCYMLMPGLALALAKMFNLSPDLAAGTILVGAVNGGQASNLCTYIANGNVALSVMMTTCTTLGAIVMTPLISKILIGAVVPVNAVGIAWSTIQVVLFPIALGMFLNRYANRAV 265          
BLAST of Gcaud7851.t1 vs. uniprot
Match: A0A1X6P5Z8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5Z8_PORUM)

HSP 1 Score: 272 bits (696), Expect = 4.210e-87
Identity = 147/220 (66.82%), Postives = 178/220 (80.91%), Query Frame = 0
Query:   14 APTETAHRSTTVAIASEDSPSLSERPRTTFRENVWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKYCN 233
            APT        VAI +  + S +E PR      +W+TYV++STL+TNLFP+WT L AL AL +PA + WLTTPYFT SLG+LMLSMGITL+++DF+RVL RFGAV IGF+GCY +MP+LAL LAK F LP +  AG++LVGAVNGGQASNL T+IA G+VALSV+MTT+TTLGAIVMTPL+S+ LIGAV+PVNA+GIA STIQVVLFPIALGM LN+Y N
Sbjct:   52 APTPLTPSPWRVAITASATSS-TEAPRAPEPSGLWSTYVKVSTLVTNLFPLWTALCALLALAKPAAFMWLTTPYFTASLGLLMLSMGITLTVEDFRRVLARFGAVIIGFLGCYGLMPVLALGLAKAFGLPADYVAGLVLVGAVNGGQASNLATFIAKGDVALSVVMTTATTLGAIVMTPLLSQLLIGAVVPVNALGIATSTIQVVLFPIALGMALNRYAN 270          
BLAST of Gcaud7851.t1 vs. uniprot
Match: M2Y501_GALSU (Bile acid:Na+ symporter, BASS family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y501_GALSU)

HSP 1 Score: 247 bits (630), Expect = 6.900e-77
Identity = 126/203 (62.07%), Postives = 161/203 (79.31%), Query Frame = 0
Query:   29 SEDSPSLSERPRTTFRENVWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKY 231
            S  S ++S     +    +W TY   +TL+TNLFP+WT+L A+ ALKRP  +TWL+TPYFTF+L +LMLSMGITLS  DFKR+ +R G V + F  CY ++PLLA  L +LF LP ++ AG++LVG+VNGGQASNLCTYIA GNVALSV+MTT+TTLGAI+MTPL+S++++G V+ VNA+GIAWSTIQVVL PIALGM LN+Y
Sbjct:   72 STSSGNVSSTQSLSLTGKLWKTYTSTTTLLTNLFPLWTLLVAMVALKRPKTFTWLSTPYFTFTLSVLMLSMGITLSPRDFKRIWKRPGIVILQFCSCYFLVPLLAYLLGRLFKLPSDILAGLVLVGSVNGGQASNLCTYIAKGNVALSVIMTTATTLGAIIMTPLLSQFVLGTVVQVNALGIAWSTIQVVLIPIALGMALNRY 274          
BLAST of Gcaud7851.t1 vs. uniprot
Match: A0A7J7ILM1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILM1_9RHOD)

HSP 1 Score: 245 bits (626), Expect = 3.620e-76
Identity = 126/187 (67.38%), Postives = 155/187 (82.89%), Query Frame = 0
Query:   47 VWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKYCN 233
            +WN +VR ST+ TNLFP+WTV+SAL A+ RP+ + W++T YFT  L ILMLSMGITL++ DF RVLRR GA+ +GF GCY +MPLLAL L +L  L P L AG++LVG++NGGQASNLCTYIANGNVALSVMMTT TT+GAI MTP + K+LIGAV+ V+A+GIA ST+QVVL PIA+GMLLN+Y N
Sbjct:  107 LWNQFVRASTVATNLFPLWTVISALLAIVRPSAFLWVSTSYFTLGLAILMLSMGITLTMRDFARVLRRPGAIAVGFFGCYGLMPLLALALGRLLRLSPELIAGLVLVGSINGGQASNLCTYIANGNVALSVMMTTCTTMGAIFMTPFLCKFLIGAVVSVDAIGIALSTMQVVLAPIAVGMLLNRYAN 293          
BLAST of Gcaud7851.t1 vs. uniprot
Match: A0A2V3J642_9FLOR (Sodium/pyruvate cotransporter BASS2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J642_9FLOR)

HSP 1 Score: 238 bits (606), Expect = 5.870e-75
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 0
Query:   99 MGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKYCN 233
            MGITLSI+DFKRVLRRFGAVTIGF+GCY++MPLLA  L KLFNLPP+LAAG+ILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISK LIGAVIPVNAVGIAWSTIQVVLFPIALGM+LNK+CN
Sbjct:    1 MGITLSIEDFKRVLRRFGAVTIGFLGCYIVMPLLAFLLTKLFNLPPSLAAGLILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKLLIGAVIPVNAVGIAWSTIQVVLFPIALGMVLNKFCN 135          
BLAST of Gcaud7851.t1 vs. uniprot
Match: A0A5J4YZ40_PORPP (Putative sodium/metabolite cotransporter BASS2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ40_PORPP)

HSP 1 Score: 242 bits (617), Expect = 9.550e-75
Identity = 124/190 (65.26%), Postives = 151/190 (79.47%), Query Frame = 0
Query:   44 RENVWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKYCN 233
            +   W  YV  ST+ TNLFPVWT L A++ +K P L+ WL T  FT +L  LMLSMGITLS+ DF RVL+RF AVT+GF+GCY +MP+L+  L   F LPP+L AG+++VG+VNGGQASNLCTYIA GNVALSVMMTT TT+GAIVMTPL+SK  IGAV+PV++VGIA ST+QVVL PI +GML+NKY N
Sbjct:   89 KSKAWRAYVAASTIFTNLFPVWTALVAVAGVKYPHLFNWLGTKQFTVALAALMLSMGITLSVQDFVRVLKRFRAVTVGFVGCYALMPVLSYVLGVAFKLPPDLLAGLVVVGSVNGGQASNLCTYIARGNVALSVMMTTVTTIGAIVMTPLLSKLFIGAVVPVDSVGIAVSTVQVVLLPIVVGMLMNKYAN 278          
BLAST of Gcaud7851.t1 vs. uniprot
Match: M1V8I5_CYAM1 (Sodium-dependent transporter n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V8I5_CYAM1)

HSP 1 Score: 242 bits (617), Expect = 1.060e-74
Identity = 127/202 (62.87%), Postives = 158/202 (78.22%), Query Frame = 0
Query:   32 SPSLSERPRTTFRENVWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKYCN 233
            +PS +    +  R ++W  +VR STL TNLFP+WT++SA+ AL+RP  + W++T YFT  L ILMLSMGITL+  DF RVLRR GA+ +GF+GCY +MPLLAL L  L  L P L AG++LVG++NGGQASNLCTYIANGNVALSVMMTT +T+GAI MTP + K LIGAV+ V+A+GIA ST+QVVL PIA GMLLN+Y N
Sbjct:  102 APSTTLESSSPVRASLWERFVRYSTLATNLFPLWTLISAVIALRRPETFLWVSTSYFTLGLAILMLSMGITLTPRDFARVLRRPGAIGVGFLGCYALMPLLALLLGHLMGLSPELIAGLVLVGSINGGQASNLCTYIANGNVALSVMMTTCSTIGAIFMTPFLCKVLIGAVVSVDALGIALSTLQVVLAPIATGMLLNRYAN 303          
BLAST of Gcaud7851.t1 vs. uniprot
Match: A0A7R9UD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD67_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.650e-70
Identity = 127/206 (61.65%), Postives = 152/206 (73.79%), Query Frame = 0
Query:   25 VAIASEDSPSLSERPRTTFRENVWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNK 230
            + +A+ D+ SLS              Y  +ST +TNLFPVWT+L A  ALK P  + W TT YFT  LGILMLSMGITLS +DF R+++R  A+ +GF GCYL MPLLAL LAK F L P L AG++LVG++NGGQASNLC YIA G+VALSV+MTT+TTLGAIV TPL+ K L+GAV+PVNAVGIA STIQVVL PI +GM  NK
Sbjct:   10 LRMATPDADSLSPPAPEPEPGKFMKAYTSLSTWLTNLFPVWTILFAGVALKSPEAFAWFTTEYFTAGLGILMLSMGITLSPNDFVRIMQRPNAILLGFAGCYLFMPLLALGLAKGFALDPALVAGMVLVGSINGGQASNLCAYIAGGDVALSVLMTTATTLGAIVCTPLLCKQLLGAVVPVNAVGIAISTIQVVLAPIVIGMSFNK 215          
BLAST of Gcaud7851.t1 vs. uniprot
Match: A0A7S1XKP9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKP9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.440e-69
Identity = 123/181 (67.96%), Postives = 142/181 (78.45%), Query Frame = 0
Query:   51 YVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNKY 231
            Y+  +T +TNLFP+WTV+ A  ALK P  + W TT YFT  LGILMLSMGITLS D F R+L R  AV +GF GCYL+MP+LA  L K F L P L AG++LVG++NGGQASNLCTYIANGNVALSV+MTT TT GAIV TPL+ K L+GAV+PVNAVGIA STIQVVL PI LGM LNK+
Sbjct:   86 YLATTTWLTNLFPLWTVIFAAWALKAPEAFAWFTTDYFTGGLGILMLSMGITLSPDQFVRILARPNAVLVGFAGCYLMMPMLAFALGKAFALSPELVAGMVLVGSINGGQASNLCTYIANGNVALSVLMTTVTTFGAIVFTPLLCKVLLGAVVPVNAVGIAVSTIQVVLAPIFLGMTLNKF 266          
BLAST of Gcaud7851.t1 vs. uniprot
Match: A0A7S1BHR8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHR8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.100e-68
Identity = 129/230 (56.09%), Postives = 164/230 (71.30%), Query Frame = 0
Query:    1 MGLRRRSPLRPFNAPTETAHRSTTVAIASEDSPSLSERPRTTFRENVWNTYVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMGITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGIILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIGAVIPVNAVGIAWSTIQVVLFPIALGMLLNK 230
            MG+R +S  R  +A T   + ST +A++S    +      TTF   ++ TY+R +++ T LFP+WTVL    ALK P+ + W TT YFT +L  LMLSMGITL  +DF +V +R  +V I F  CY +MPLLALFL K   L   L AG++LVG++NGGQASNLCTYIA GNVALSV+MTT+TTLGAI MTPL+ K L+GA++PV+AVGIA STIQVVL PIA+GM LNK
Sbjct:   40 MGMRLKSGSRNRSALTSRVYLSTKLAMSSTALDTSDAE--TTFGSKLFATYIRAASIATTLFPLWTVLFTGMALKSPSSFAWFTTEYFTAALAALMLSMGITLKPEDFAKVAKRPNSVFIQFALCYAMMPLLALFLGKACGLDSALLAGVVLVGSINGGQASNLCTYIAKGNVALSVLMTTATTLGAIFMTPLLCKTLLGAIVPVDAVGIAMSTIQVVLAPIAVGMFLNK 267          
The following BLAST results are available for this feature:
BLAST of Gcaud7851.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QHD3_CHOCR5.250e-10478.67Sodium-dependent transporter n=1 Tax=Chondrus cris... [more]
A0A1X6P5Z8_PORUM4.210e-8766.82Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2Y501_GALSU6.900e-7762.07Bile acid:Na+ symporter, BASS family n=1 Tax=Galdi... [more]
A0A7J7ILM1_9RHOD3.620e-7667.38Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A2V3J642_9FLOR5.870e-7591.11Sodium/pyruvate cotransporter BASS2, chloroplastic... [more]
A0A5J4YZ40_PORPP9.550e-7565.26Putative sodium/metabolite cotransporter BASS2, ch... [more]
M1V8I5_CYAM11.060e-7462.87Sodium-dependent transporter n=1 Tax=Cyanidioschyz... [more]
A0A7R9UD67_9STRA2.650e-7061.65Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1XKP9_9STRA2.440e-6967.96Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1BHR8_9STRA1.100e-6856.09Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002657Bile acid:sodium symporter/arsenical resistance protein Acr3PFAMPF01758SBFcoord: 90..232
e-value: 2.7E-35
score: 121.8
IPR038770Sodium/solute symporter superfamilyGENE3D1.20.1530.20coord: 46..236
e-value: 9.3E-51
score: 174.7
NoneNo IPR availablePANTHERPTHR10361:SF62SODIUM/PYRUVATE COTRANSPORTER BASS2, CHLOROPLASTICcoord: 33..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..228
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..140
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
NoneNo IPR availableTMHMMTMhelixcoord: 209..228
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 146..165
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
IPR004710Bile acid:sodium symporterPANTHERPTHR10361SODIUM-BILE ACID COTRANSPORTERcoord: 33..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1661_length_9227_cov_4.757881contigNODE_1661_length_9227_cov_4.757881:8195..9008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7851.t1Gcaud7851.t1Gracilaria caudata M_176_S67 malemRNANODE_1661_length_9227_cov_4.757881 8195..9008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7851.t1 ID=Gcaud7851.t1|Name=Gcaud7851.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=237bp
MGLRRRSPLRPFNAPTETAHRSTTVAIASEDSPSLSERPRTTFRENVWNT
YVRISTLITNLFPVWTVLSALSALKRPALYTWLTTPYFTFSLGILMLSMG
ITLSIDDFKRVLRRFGAVTIGFMGCYLIMPLLALFLAKLFNLPPNLAAGI
ILVGAVNGGQASNLCTYIANGNVALSVMMTTSTTLGAIVMTPLISKWLIG
AVIPVNAVGIAWSTIQVVLFPIALGMLLNKYCNAPV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002657BilAc:Na_symport/Acr3
IPR038770Na+/solute_symporter_sf
IPR004710Bilac:Na_transpt