Gcaud7839.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7839.t1
Unique NameGcaud7839.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length162
Homology
BLAST of Gcaud7839.t1 vs. uniprot
Match: A0A2V3J0A2_9FLOR (Endoplasmic reticulum transmembrane protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0A2_9FLOR)

HSP 1 Score: 245 bits (626), Expect = 4.200e-81
Identity = 119/161 (73.91%), Postives = 142/161 (88.20%), Query Frame = 0
Query:    1 MSLLWRSVSTVLVAELVILLALCAPLPWGVRKNVSRWIFRVNAQKKLNTTVKYVTFALFLALAESINGLRIAVERSRKHQEAQFVQDPVYVTPATDYRWQKVRAERNFYLASFAIVALVAIARLVRLASIEVQLRDRIKSYNGNKPISETGETIGEEGKSD 161
            MSL+WRSVS VL+ E+++LLALCAPLPWGVRKN+SRWIFRV A+++LN+ +KY+TFALF+ALAES+N LRI  ER+R+  E    QDPVY+TPATDYRW+KVRAERNFYLASF+I+ LVAI RLVRLA+IEVQLR RIKSYNGNKPISETGET+   GK+D
Sbjct:    1 MSLMWRSVSVVLLIEVIVLLALCAPLPWGVRKNISRWIFRVKARERLNSIIKYITFALFMALAESLNALRIVAERTREQNEGHLTQDPVYITPATDYRWKKVRAERNFYLASFSIITLVAITRLVRLAAIEVQLRQRIKSYNGNKPISETGETLEIRGKTD 161          
BLAST of Gcaud7839.t1 vs. uniprot
Match: UPI001E1DC6BA (B-cell receptor-associated protein 31-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC6BA)

HSP 1 Score: 100 bits (250), Expect = 8.940e-24
Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 0
Query:    2 SLLWRSVSTVLVAELVILLALCAPLPWGVRKNVSRWIFRVNAQKKLNTTVKYVTFALFLALAESINGLRIAVERSRKHQEAQFVQDPVYVTPAT----------DYRWQKVRAERNFYLASFAIVALVAIARLVRLASIEVQLRDRIK 139
            S LW  V+ VL  EL++L    APLPWGVRKNV+R+  R   +      ++YV F L LA+ ESI+GL+        H+  QF  D      A+          D+RWQ V A+RN YLA F +V L  ++R++ L S E  LRD+IK
Sbjct:    3 SFLWACVTVVLALELLVLSLFVAPLPWGVRKNVTRFFQRPAVEAAFQRVLRYVGFGLALAIVESIHGLQ------NLHKVIQFSVDERVSLDASANVASDVSAHDFRWQSVLAQRNLYLAGFCLVLLFTLSRVIELVSHETALRDKIK 144          
BLAST of Gcaud7839.t1 vs. uniprot
Match: A0A5J4Z992_PORPP (Endoplasmic reticulum transmembrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z992_PORPP)

HSP 1 Score: 77.8 bits (190), Expect = 4.330e-15
Identity = 48/151 (31.79%), Postives = 81/151 (53.64%), Query Frame = 0
Query:    2 SLLWRSVSTVLVAELVILLALCAPLPWGVRKNVSRWIFRVNAQKKLNTTVKYVTFALFLALAESINGLRIAVERSRKHQEAQFVQDPVYVTPATDYRWQKVRAERNFYLASFAIVALVAIARLVRLASIEVQLRDRIK--SYNGNKPISET 150
            S++W +V  +LV ELV+++ LC PLPWG+RK V + +        + T + ++  AL LA A S+  +    E+S  ++          V   +  R +K R+ERN YL+ F +   + + RL  L + EVQLR +++  S   + P ++T
Sbjct:    4 SIVWMAVFCLLVFELVLVVLLCLPLPWGMRKFVVKLVGSAKGIHHVQTGIVFLLLALTLAFASSVQEMLFVTEKSNAYKFELSSASGYEVWEYSKLRQEKFRSERNMYLSLFCLTLSLVLRRLFELFANEVQLRSQLEGASKGTDAPAAQT 154          
The following BLAST results are available for this feature:
BLAST of Gcaud7839.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J0A2_9FLOR4.200e-8173.91Endoplasmic reticulum transmembrane protein n=1 Ta... [more]
UPI001E1DC6BA8.940e-2441.22B-cell receptor-associated protein 31-like n=1 Tax... [more]
A0A5J4Z992_PORPP4.330e-1531.79Endoplasmic reticulum transmembrane protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040463BAP29/BAP31, transmembrane domainPFAMPF05529Bap31coord: 1..139
e-value: 1.0E-19
score: 70.8
NoneNo IPR availablePANTHERPTHR12701:SF50LP10861Pcoord: 1..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
IPR008417B-cell receptor-associated protein 29/31PANTHERPTHR12701BCR-ASSOCIATED PROTEIN, BAPcoord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_647_length_20364_cov_4.929216contigNODE_647_length_20364_cov_4.929216:649..1134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7839.t1Gcaud7839.t1Gracilaria caudata M_176_S67 malemRNANODE_647_length_20364_cov_4.929216 649..1134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7839.t1 ID=Gcaud7839.t1|Name=Gcaud7839.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=162bp
MSLLWRSVSTVLVAELVILLALCAPLPWGVRKNVSRWIFRVNAQKKLNTT
VKYVTFALFLALAESINGLRIAVERSRKHQEAQFVQDPVYVTPATDYRWQ
KVRAERNFYLASFAIVALVAIARLVRLASIEVQLRDRIKSYNGNKPISET
GETIGEEGKSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040463BAP29/BAP31_N
IPR008417BAP29/BAP31