Gcaud7820.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7820.t1
Unique Name	Gcaud7820.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	177

Homology

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BLAST of Gcaud7820.t1 vs. uniprot
Match: V5NG23_GRALE (Ubiquitin-conjugating enzyme n=3 Tax=Rhodymeniophycidae TaxID=2045261 RepID=V5NG23_GRALE)

HSP 1 Score: 292 bits (748), Expect = 1.210e-99
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 176
            ELQDLGKDPPSNCSAGPA+DDLFNWQA+IMGPPDSPYSGGVYFL IHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ
Sbjct:    9 ELQDLGKDPPSNCSAGPAADDLFNWQASIMGPPDSPYSGGVYFLNIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 147

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BLAST of Gcaud7820.t1 vs. uniprot
Match: R7QFA7_CHOCR (UBC core domain-containing protein n=3 Tax=Rhodophyta TaxID=2763 RepID=R7QFA7_CHOCR)

HSP 1 Score: 288 bits (738), Expect = 4.050e-98
Identity = 134/139 (96.40%), Postives = 136/139 (97.84%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYAQ 176
            ELQDLGKDPPSNCSAGPA DDLF+WQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISF TRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNR RYE+TAREWTRKYAQ
Sbjct:    9 ELQDLGKDPPSNCSAGPAGDDLFHWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFTTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRQRYEETAREWTRKYAQ 147

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BLAST of Gcaud7820.t1 vs. uniprot
Match: M2XRN0_GALSU (Ubiquitin-conjugating enzyme E2 n=4 Tax=Bangiophyceae TaxID=2797 RepID=M2XRN0_GALSU)

HSP 1 Score: 274 bits (701), Expect = 1.770e-92
Identity = 123/138 (89.13%), Postives = 131/138 (94.93%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            ELQDLG+DPPSNCSAGP  DDLF+WQATIMGPPDSPY+GGV+FL IHFPTDYPFKPPK+ F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQ YKTNR +YE+TAREWTRKYA
Sbjct:    9 ELQDLGRDPPSNCSAGPVGDDLFHWQATIMGPPDSPYAGGVFFLNIHFPTDYPFKPPKVQFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQLYKTNRGKYEETAREWTRKYA 146

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BLAST of Gcaud7820.t1 vs. uniprot
Match: A0A075B100_ROZAC (Ubiquitin-conjugating enzyme n=9 Tax=Opisthokonta TaxID=33154 RepID=A0A075B100_ROZAC)

HSP 1 Score: 271 bits (693), Expect = 4.120e-91
Identity = 122/142 (85.92%), Postives = 132/142 (92.96%), Query Frame = 0

Query:   34 FAGNELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            F   ELQDLG+DPPSNCSAGP  DDLF+WQATIMGPPDSPY GGV+FL+IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+R+RYE TAREWTRKYA
Sbjct:   15 FKPKELQDLGRDPPSNCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHLYKTDRSRYEATAREWTRKYA 156

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BLAST of Gcaud7820.t1 vs. uniprot
Match: A0A194W8P5_9PEZI (UBC core domain-containing protein n=11 Tax=leotiomyceta TaxID=716546 RepID=A0A194W8P5_9PEZI)

HSP 1 Score: 265 bits (677), Expect = 8.050e-89
Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            EL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKTNRA+YE TAREWTRKYA
Sbjct:    9 ELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTNRAQYESTAREWTRKYA 146

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BLAST of Gcaud7820.t1 vs. uniprot
Match: R7YU66_CONA1 (Ubiquitin-conjugating enzyme E2-16 kDa n=9 Tax=leotiomyceta TaxID=716546 RepID=R7YU66_CONA1)

HSP 1 Score: 265 bits (676), Expect = 1.140e-88
Identity = 120/138 (86.96%), Postives = 129/138 (93.48%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            EL DLG+DPPS+CSAGP  DDLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:    9 ELTDLGRDPPSSCSAGPIGDDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 146

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BLAST of Gcaud7820.t1 vs. uniprot
Match: A0A7S4J549_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J549_9EUKA)

HSP 1 Score: 264 bits (675), Expect = 1.620e-88
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            ELQDLGKDPPSNCSAGP  DDLF+WQATIMGPPDSP+ GGV+FL IHFPTDYPFKPPK+SF TRIYHPN+NSNGSICLDIL  QWSPALT+SKV+LSICSLLTDPNPDDPLVPEIA+ YK++R +YEDTA+EWTRKYA
Sbjct:    9 ELQDLGKDPPSNCSAGPVGDDLFHWQATIMGPPDSPFQGGVFFLNIHFPTDYPFKPPKVSFTTRIYHPNVNSNGSICLDILNSQWSPALTISKVVLSICSLLTDPNPDDPLVPEIARIYKSDRKKYEDTAKEWTRKYA 146

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BLAST of Gcaud7820.t1 vs. uniprot
Match: A7F0Q4_SCLS1 (Ubiquitin-conjugating enzyme E2 n=12 Tax=Sclerotiniaceae TaxID=28983 RepID=A7F0Q4_SCLS1)

HSP 1 Score: 264 bits (674), Expect = 2.310e-88
Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            EL DLG+DPPS+CSAGP  DDLF+WQATIMGP DSPY+GGV+FL IHFPTDYPFKPPK+SF TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+R+RYE TAREWTRKYA
Sbjct:    9 ELTDLGRDPPSSCSAGPIGDDLFHWQATIMGPSDSPYTGGVFFLAIHFPTDYPFKPPKVSFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRSRYEATAREWTRKYA 146

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BLAST of Gcaud7820.t1 vs. uniprot
Match: A0A7J7IE24_9RHOD (Ubiquitin-conjugating enzyme E2 4 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IE24_9RHOD)

HSP 1 Score: 264 bits (674), Expect = 2.310e-88
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            EL DLGKDPP+NCSAGP  DDLF+WQATI+GPPDSPY+GGVYFL IHFPTDYPFKPPK+ F T+IYHPNINSNGSICLDILR+QWSPALT+SKVLLSICSLLTDPNPDDPLVP+IA  YKTNRA+YE+ AREWTR+YA
Sbjct:    9 ELVDLGKDPPANCSAGPVGDDLFHWQATIIGPPDSPYAGGVYFLNIHFPTDYPFKPPKVQFTTKIYHPNINSNGSICLDILREQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAHKYKTNRAKYEEEAREWTRRYA 146

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BLAST of Gcaud7820.t1 vs. uniprot
Match: H1VKL9_COLHI (Ubiquitin conjugating enzyme n=42 Tax=Sordariomycetes TaxID=147550 RepID=H1VKL9_COLHI)

HSP 1 Score: 263 bits (673), Expect = 3.280e-88
Identity = 119/138 (86.23%), Postives = 129/138 (93.48%), Query Frame = 0

Query:   38 ELQDLGKDPPSNCSAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVTRIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAQTYKTNRARYEDTAREWTRKYA 175
            EL DLG+DPPS+CSAGP  +DLF+WQATIMGP DSPYSGGV+FL IHFPTDYPFKPPK++F TRIYHPNINSNGSICLDILRDQWSPALT+SKVLLSICS+LTDPNPDDPLVPEIA  YKT+RARYE TAREWTRKYA
Sbjct:    9 ELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTDRARYEATAREWTRKYA 146

The following BLAST results are available for this feature:

BLAST of Gcaud7820.t1 vs. uniprot

BLAST of Gcaud7820.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
V5NG23_GRALE	1.210e-99	97.84	Ubiquitin-conjugating enzyme n=3 Tax=Rhodymeniophy...	[more]
R7QFA7_CHOCR	4.050e-98	96.40	UBC core domain-containing protein n=3 Tax=Rhodoph...	[more]
M2XRN0_GALSU	1.770e-92	89.13	Ubiquitin-conjugating enzyme E2 n=4 Tax=Bangiophyc...	[more]
A0A075B100_ROZAC	4.120e-91	85.92	Ubiquitin-conjugating enzyme n=9 Tax=Opisthokonta ...	[more]
A0A194W8P5_9PEZI	8.050e-89	86.23	UBC core domain-containing protein n=11 Tax=leotio...	[more]
R7YU66_CONA1	1.140e-88	86.96	Ubiquitin-conjugating enzyme E2-16 kDa n=9 Tax=leo...	[more]
A0A7S4J549_9EUKA	1.620e-88	84.78	Hypothetical protein n=1 Tax=Prymnesium polylepis ...	[more]
A7F0Q4_SCLS1	2.310e-88	86.23	Ubiquitin-conjugating enzyme E2 n=12 Tax=Sclerotin...	[more]
A0A7J7IE24_9RHOD	2.310e-88	84.78	Ubiquitin-conjugating enzyme E2 4 n=2 Tax=Cyanidia...	[more]
H1VKL9_COLHI	3.280e-88	86.23	Ubiquitin conjugating enzyme n=42 Tax=Sordariomyce...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	SMART	SM00212	ubc_7	coord: 33..176 e-value: 3.2E-71 score: 252.6
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 38..174
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 38..174
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 37..170 e-value: 3.0E-52 score: 176.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 30..176 score: 56.360138
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 37..171 e-value: 5.48583E-69 score: 203.973
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 35..176 e-value: 9.0E-71 score: 238.6
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 37..175
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 103..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_213_length_36751_cov_4.280933	contig	NODE_213_length_36751_cov_4.280933:35696..36561 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7820.t1	Gcaud7820.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_213_length_36751_cov_4.280933 35696..36561 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7820.t1 ID=Gcaud7820.t1|Name=Gcaud7820.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=177bp
MNPTARVSSTGRFPVNPNELSLPASFFCFWKPFFAGNELQDLGKDPPSNC
SAGPASDDLFNWQATIMGPPDSPYSGGVYFLTIHFPTDYPFKPPKISFVT
RIYHPNINSNGSICLDILRDQWSPALTVSKVLLSICSLLTDPNPDDPLVP
EIAQTYKTNRARYEDTAREWTRKYAQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS