Gcaud7819.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7819.t1
Unique NameGcaud7819.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length266
Homology
BLAST of Gcaud7819.t1 vs. uniprot
Match: A0A2V3INQ6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ6_9FLOR)

HSP 1 Score: 358 bits (920), Expect = 1.230e-122
Identity = 180/261 (68.97%), Postives = 205/261 (78.54%), Query Frame = 0
Query:    5 MEKLRVVKKSEALTEG--GMFKKRKRSGTARTRKRQRTSAHVEGGDNEEDTRVKVVQPKARGPRRKNAGWHREQFSANIEQLVSNDAVAERTDVGGDAGSSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKLQLKH 263
            M KL   K+S   T    G+FKKR RSG  +TRKR R        D E D+RVK+ Q K +  +++N+ W RE FS   E   + +A AER DVGGD    K+ K+ FGPM+APAHLR SVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEK+KRDALLRGE+P+ E+A+  KEE D+DGLPFACFLCREEFKSP+ TLC+HYFCE+CAL+RMEKD TCPICKKQLRDTLNPA KLIAKLQLKH
Sbjct:    1 MTKLERSKESATPTRSTAGVFKKRARSGATKTRKRTRPV-----DDGETDSRVKLPQQKTKVAKKRNSSWQRELFSTGAESAPTQNATAERGDVGGDEAPPKTKKKAFGPMRAPAHLRASVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKRKRDALLRGENPNNEDANEKKEEYDEDGLPFACFLCREEFKSPIKTLCDHYFCEKCALARMEKDSTCPICKKQLRDTLNPAPKLIAKLQLKH 256          
BLAST of Gcaud7819.t1 vs. uniprot
Match: R7QEF1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEF1_CHOCR)

HSP 1 Score: 276 bits (705), Expect = 5.360e-90
Identity = 135/233 (57.94%), Postives = 171/233 (73.39%), Query Frame = 0
Query:   32 ARTRKRQRTSAHVEGGDNEEDTRVKVVQPKARGPRRKNAGWHREQFSANIE-QLVSNDAVAERTDVGGDAGSSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAE-EASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKLQLK 262
            +RT  R+R     E  D+    +   +  K R  +RK   W R  FSAN +    S  A A R D+GG+A      K+PFGPM+APAH+RTSVRVDYQ D+CKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEK +R+ ++RGE+PD E + +  +++ D+DGLPFAC++CR +FK+PV+T+C HYFCE+CAL R+ KD TC IC+KQL  TLN A+KL+AKL+ K
Sbjct:   18 SRTSSRRRVRVSTEENDDATGKQGLELVAKDRIGKRKRKEWERPHFSANGKLSEPSAIATAVREDIGGEANPHNKRKKPFGPMQAPAHIRTSVRVDYQADICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKLRREKVIRGENPDEESQGNESQKDLDEDGLPFACYICRGDFKNPVVTICHHYFCEQCALDRLSKDSTCAICRKQLSGTLNVATKLVAKLKTK 250          
BLAST of Gcaud7819.t1 vs. uniprot
Match: A0A7S2ZZL0_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZL0_9RHOD)

HSP 1 Score: 189 bits (479), Expect = 8.690e-56
Identity = 87/159 (54.72%), Postives = 111/159 (69.81%), Query Frame = 0
Query:  102 SSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRG---EDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIA 257
            S+ + KR +GP KAP++LR SVR DYQPD+CKDYKETG+CGFGD+C FLHDR DYK+GWQLE++W E   KK+  L  G   +D D E+      +  K  LPFACF+CR+ F  P++TLC+HYF E+CAL R   DPTC +C K  +   N A KL+A
Sbjct:   96 STGTVKRSYGPKKAPSNLRASVRFDYQPDICKDYKETGFCGFGDACIFLHDRGDYKSGWQLEKEWDEANAKKKLKLKSGKTDQDDDIEDQQKADVKKGKQELPFACFICRKPFIRPIVTLCQHYFDEKCALDRFSTDPTCAVCGKDTKGAFNVAKKLVA 254          
BLAST of Gcaud7819.t1 vs. uniprot
Match: W8C1K0_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8C1K0_CERCA)

HSP 1 Score: 190 bits (483), Expect = 1.640e-55
Identity = 90/163 (55.21%), Postives = 113/163 (69.33%), Query Frame = 0
Query:  101 GSSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKLQLKH 263
            G++ S     GPM+APAHLR +VR DYQPD+CKDYKETGYCGFGDSCKFLHDRSDYKAGWQLE D A        A  RGE    E+ +  +   D++ LPF CF+CR  F++PV+T C+HYFCE+CAL   +K   C +C +Q     NPA +LIA+L+ +H
Sbjct:  165 GNASSGMVRKGPMRAPAHLRATVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLELDHA--------AQQRGEIESDEDDAKYEIHSDEETLPFKCFICRNSFENPVVTKCKHYFCEKCALENYKKSQRCFVCSQQTNGIFNPAKELIARLKNEH 319          
BLAST of Gcaud7819.t1 vs. uniprot
Match: A0A0S3SXT7_PHAAN (Uncharacterized protein n=3 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3SXT7_PHAAN)

HSP 1 Score: 190 bits (482), Expect = 2.260e-55
Identity = 83/158 (52.53%), Postives = 110/158 (69.62%), Query Frame = 0
Query:  102 SSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKL 259
            +S+ +    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK ++  L  GED D EE + + +E D+D LPFACF+CR  F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  168 ASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWEEAEKARKMRLAAGEDADEEEGANLNDEDDEDSLPFACFICRNPFADPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKM 325          
BLAST of Gcaud7819.t1 vs. uniprot
Match: A0A1S3VXV0_VIGRR (zinc finger CCCH domain-containing protein 1 n=9 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3VXV0_VIGRR)

HSP 1 Score: 189 bits (481), Expect = 3.190e-55
Identity = 83/158 (52.53%), Postives = 110/158 (69.62%), Query Frame = 0
Query:  102 SSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKL 259
            +S+ +    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK ++  L  GED D EE + + +E D+D LPFACF+CR  F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  168 ASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKARKMRLAAGEDADEEEGANLNDEDDEDSLPFACFICRNPFADPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKM 325          
BLAST of Gcaud7819.t1 vs. uniprot
Match: A0A834W4X9_9FABA (Zinc finger CCCH domain-containing protein 1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834W4X9_9FABA)

HSP 1 Score: 189 bits (481), Expect = 3.370e-55
Identity = 85/158 (53.80%), Postives = 108/158 (68.35%), Query Frame = 0
Query:  102 SSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKL 259
            +S+ +    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK +R  L  GEDP+ E      EE D D LPFACF+CRE F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  169 ASEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKARRMRLAAGEDPNEEGDELTGEEDDDDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHTKNKKCFVCNQPTLGIFNTAHEIRKKM 326          
BLAST of Gcaud7819.t1 vs. uniprot
Match: A0A8B8L632_ABRPR (zinc finger CCCH domain-containing protein 1 isoform X1 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8L632_ABRPR)

HSP 1 Score: 189 bits (481), Expect = 3.960e-55
Identity = 84/158 (53.16%), Postives = 109/158 (68.99%), Query Frame = 0
Query:  102 SSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKL 259
            +S+ +    GP++A AH+R S R DYQPD+CKDYKETGYCG+GD+CKF+HDR DYK+GWQLE++W E EK KR  L  GED D EE + + +E D D LPFACF+CR  F  PV+T C+HYFCE CAL    K+  C +C +      N A ++  K+
Sbjct:  176 ASEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEAEKAKRMRLAAGEDADEEEGANLTDEDDDDSLPFACFICRNPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTLGIFNVAHEIRRKM 333          
BLAST of Gcaud7819.t1 vs. uniprot
Match: A0A1I8MP48_MUSDO (Uncharacterized protein n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8MP48_MUSDO)

HSP 1 Score: 189 bits (480), Expect = 5.890e-55
Identity = 90/161 (55.90%), Postives = 112/161 (69.57%), Query Frame = 0
Query:  100 AGSSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKLQ 260
            AG++ S     GP++APAHLR +VR DYQPD+CKDYKETGYCGFGDSCKFLHDRSDYKAGWQLE D A        A  +GE    E+ S  +   D++ LPF CF+CR+ F +PV+T C+HYFCE+CAL   +K   C IC +Q     NPA +LIA+L+
Sbjct:  168 AGNASSGMVRKGPIRAPAHLRATVRWDYQPDICKDYKETGYCGFGDSCKFLHDRSDYKAGWQLELDHA--------AQQKGECESDEDDSKYEIHSDEESLPFKCFICRQSFVNPVVTKCKHYFCEKCALEHYKKSQRCFICSQQTNGIFNPAKELIARLK 320          
BLAST of Gcaud7819.t1 vs. uniprot
Match: UPI0010A5710F (zinc finger CCCH domain-containing protein 1-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A5710F)

HSP 1 Score: 189 bits (479), Expect = 6.180e-55
Identity = 86/158 (54.43%), Postives = 110/158 (69.62%), Query Frame = 0
Query:  102 SSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFLHDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGLPFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLNPASKLIAKL 259
            SS+ +    GP++A AH+R S R DYQPD+CKDYKETGYCG+GDSCKF+HDR DYK+GWQLE++W E EK +R  L  GED D EE + + +E D D LPFACF+CR+ F  PV+T C+HYFCE CAL    K+  C +C K      N A ++  K+
Sbjct:  167 SSEKAGGAHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWEEAEKARRMRLAAGEDSD-EEGANLSDEDDDDSLPFACFICRKPFVDPVVTNCKHYFCEHCALKHHAKNKKCFVCNKPTLGIFNAAHEIRKKM 323          
The following BLAST results are available for this feature:
BLAST of Gcaud7819.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ6_9FLOR1.230e-12268.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEF1_CHOCR5.360e-9057.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZZL0_9RHOD8.690e-5654.72Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
W8C1K0_CERCA1.640e-5555.21(Mediterranean fruit fly) hypothetical protein n=1... [more]
A0A0S3SXT7_PHAAN2.260e-5552.53Uncharacterized protein n=3 Tax=Phaseoleae TaxID=1... [more]
A0A1S3VXV0_VIGRR3.190e-5552.53zinc finger CCCH domain-containing protein 1 n=9 T... [more]
A0A834W4X9_9FABA3.370e-5553.80Zinc finger CCCH domain-containing protein 1 n=1 T... [more]
A0A8B8L632_ABRPR3.960e-5553.16zinc finger CCCH domain-containing protein 1 isofo... [more]
A0A1I8MP48_MUSDO5.890e-5555.90Uncharacterized protein n=1 Tax=Musca domestica Ta... [more]
UPI0010A5710F6.180e-5554.43zinc finger CCCH domain-containing protein 1-like ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 204..241
e-value: 1.0E-5
score: 35.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 204..242
score: 11.751628
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 126..153
e-value: 1.6E-7
score: 41.0
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 127..152
e-value: 2.0E-9
score: 37.2
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 126..154
score: 15.23438
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 202..261
e-value: 4.7E-16
score: 60.1
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 204..241
e-value: 1.0E-8
score: 34.8
NoneNo IPR availableGENE3D4.10.1000.10coord: 125..158
e-value: 1.6E-5
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..59
NoneNo IPR availablePANTHERPTHR12930:SF0RING FINGER PROTEIN 113A1-RELATEDcoord: 102..263
NoneNo IPR availableCDDcd16539RING-HC_RNF113A_Bcoord: 202..241
e-value: 2.97893E-17
score: 71.4927
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 203..247
IPR039971Pre-mRNA-splicing factor CWC24-likePANTHERPTHR12930ZINC FINGER PROTEIN 183coord: 102..263
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 219..228
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 125..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_213_length_36751_cov_4.280933contigNODE_213_length_36751_cov_4.280933:32961..33758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7819.t1Gcaud7819.t1Gracilaria caudata M_176_S67 malemRNANODE_213_length_36751_cov_4.280933 32961..33758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7819.t1 ID=Gcaud7819.t1|Name=Gcaud7819.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=266bp
MEATMEKLRVVKKSEALTEGGMFKKRKRSGTARTRKRQRTSAHVEGGDNE
EDTRVKVVQPKARGPRRKNAGWHREQFSANIEQLVSNDAVAERTDVGGDA
GSSKSSKRPFGPMKAPAHLRTSVRVDYQPDVCKDYKETGYCGFGDSCKFL
HDRSDYKAGWQLERDWAEKEKKKRDALLRGEDPDAEEASAVKEECDKDGL
PFACFLCREEFKSPVMTLCEHYFCEECALSRMEKDPTCPICKKQLRDTLN
PASKLIAKLQLKHKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR000571Znf_CCCH
IPR013083Znf_RING/FYVE/PHD
IPR039971CWC24-like
IPR017907Znf_RING_CS
IPR036855Znf_CCCH_sf