Gcaud7799.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7799.t1
Unique NameGcaud7799.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length167
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud7799.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 49..72
e-value: 0.0046
score: 26.2
coord: 14..39
e-value: 12.0
score: 12.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 51..72
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 49..72
score: 9.826565
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 15..92
e-value: 1.7E-9
score: 39.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..166
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 47..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3072_length_4096_cov_4.832959contigNODE_3072_length_4096_cov_4.832959:1476..2439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7799.t1Gcaud7799.t1Gracilaria caudata M_176_S67 malemRNANODE_3072_length_4096_cov_4.832959 1476..2439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7799.t1 ID=Gcaud7799.t1|Name=Gcaud7799.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=167bp
MSNQAYTRKPITLKQCPEPSCLRKLAGEAALSRHLNQEHRGGTSSNRPYK
CISCGFVFKTGNSLRIHRKNKHEVGNTNSRSQGVQKPERKPILPKPSTER
GSSAGSSNQTLSKQTHLAKRDPIKKEPANARDPQTRGSLRGTNLYMFLND
LYYLYGILILQSLDSH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf