Gcaud7793.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7793.t1
Unique NameGcaud7793.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length362
Homology
[Close]
BLAST of Gcaud7793.t1 vs. uniprot
Match: A0A2V3IQS4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS4_9FLOR)

HSP 1 Score: 364 bits (935), Expect = 5.870e-122
Identity = 190/350 (54.29%), Postives = 246/350 (70.29%), Query Frame = 0 
Query:    1 MTNEVHREVIYLGVIENSPFLFLRNPVPEIIKFALTFAVIFILGRLYYPSRVELQLLKKIKRSPVHKLPATLRSLVQDRSMLLAFVALVVRWTFWNVGVGKEERYASFPSPVIYRVPRPLSPRLCFNGAYQERRRFTLMEAELCARTWKARNGLTAVQYVPVVYSPKLQRFSCLSPSSMVAYGSIRIDNGTARGTEDAYVHDMHSLRHGCELNGHNCSGIESVRTHNNGTTWMVISDPIRGRLVVFILLRRLGNASLGEGYFSWLNGKSAEHILKVMLSIHLELSRATCYDTAREVPVGEKSAHLYIDLQILFCLVLLEIVLSRLEVMHGKRAAENGVLSHFSEVVVELL 350
            M NEV   V Y  +  ++PFLFL+   PE+IK  LT  +I ++ RLY PSR+E++LL+ I    + +LP+T+R+++ DR M +A VA+VVR+ FWN G+GK+ RY  F +PV+YRV +PL+P LCFNG  +E+R F L EAE C+RTWKAR+G TAVQYVP VYS + Q++SCLSPS M++YG I IDN T +G  D YVHD+ SL   C   G++CS I SV+T  NGTTWM++S P   RL +FILLRR G A+LGEGY ++  GKS + ILK++LSI LELS A CYDT REVPVGEKS+H YID++ LF LVLLE  L  +  M  K   EN      SE  V+LL
Sbjct:    1 MVNEVPHHVFYFEMRGSAPFLFLQFAFPELIKLLLTIIMILVMRRLYKPSRIEVKLLQTISGRRLRQLPSTVRAILGDRDMYIAVVAIVVRFAFWNHGLGKQLRYPPFATPVLYRVAQPLAPHLCFNGTSREKRDFVLAEAEFCSRTWKARHGWTAVQYVPAVYSQEYQKYSCLSPSRMISYGRITIDNSTYKG--DGYVHDIQSLWSNCAEVGYDCSQITSVKTSENGTTWMMLSSPKARRLGIFILLRRPGRAALGEGYRAFNEGKSLDQILKIILSIDLELSLADCYDTKREVPVGEKSSHFYIDIRSLFSLVLLECFLYWIPFMRAKEEHEN-----VSEAFVDLL 343
The following BLAST results are available for this feature:
BLAST of Gcaud7793.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQS4_9FLOR5.870e-12254.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 303..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 323..361
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1053_length_14587_cov_5.039666contigNODE_1053_length_14587_cov_5.039666:11725..12810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7793.t1Gcaud7793.t1Gracilaria caudata M_176_S67 malemRNANODE_1053_length_14587_cov_5.039666 11725..12810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7793.t1 ID=Gcaud7793.t1|Name=Gcaud7793.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=362bp
MTNEVHREVIYLGVIENSPFLFLRNPVPEIIKFALTFAVIFILGRLYYPS
RVELQLLKKIKRSPVHKLPATLRSLVQDRSMLLAFVALVVRWTFWNVGVG
KEERYASFPSPVIYRVPRPLSPRLCFNGAYQERRRFTLMEAELCARTWKA
RNGLTAVQYVPVVYSPKLQRFSCLSPSSMVAYGSIRIDNGTARGTEDAYV
HDMHSLRHGCELNGHNCSGIESVRTHNNGTTWMVISDPIRGRLVVFILLR
RLGNASLGEGYFSWLNGKSAEHILKVMLSIHLELSRATCYDTAREVPVGE
KSAHLYIDLQILFCLVLLEIVLSRLEVMHGKRAAENGVLSHFSEVVVELL
SGEDEHELEAA*
back to top