Gcaud779.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud779.t1
Unique NameGcaud779.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length247
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud779.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..138
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 144..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2315_length_6107_cov_3.862866contigNODE_2315_length_6107_cov_3.862866:2834..3574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud779.t1Gcaud779.t1Gracilaria caudata M_176_S67 malemRNANODE_2315_length_6107_cov_3.862866 2834..3574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud779.t1 ID=Gcaud779.t1|Name=Gcaud779.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=247bp
MSSGEAAPQYGATTSVNGAREHAEHAPRAAREHVVDAADDGDQLLPRRTL
VILLLRLNIFERSHLTLSSFIALIALALSLTPLCVYALVSQPTVQRWFVA
HVNEIQASELYLLTLFAAAFMPGVATIVSVLLRVSPLYVVLTGLVCGALD
LAYNVCCNVALFMALIKPSGGGFVAVPPHEVAQLRGHIGDGPNSLLLLAL
ALGVVYLLLFAALHLMHAAYYRGVKTAVRSGVGLQRYVHNSGEIVV*
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