Gcaud7765.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7765.t1
Unique Name	Gcaud7765.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	409

Homology

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BLAST of Gcaud7765.t1 vs. uniprot
Match: R7QD49_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD49_CHOCR)

HSP 1 Score: 199 bits (505), Expect = 9.280e-54
Identity = 91/206 (44.17%), Postives = 136/206 (66.02%), Query Frame = 0

Query:    1 MRSAIAFNRDVVEHFKSAPRVDDYASSKYPKMNETLFVKLRWNEAHCNEKRNEDGTVCILSGEILSTDDYVNSIAYAATTVGASKIYISAPPHVPEDVSAQISSKLRPVDPVVLDVGSDFFTASVIEREMALRSRAFVADGGAWGESVQEARRMHYPHLFKEGYNSLLMVEEWRNAGSPTELPIIMASHVQEDYMENETSNPGASA 206
            MR+ IA N DV+ HF  A  + DY   ++P +N TLFVKLRW+   C++   ++GTVCI    I+    YVN+IA+AA  +GA+ IY++ P HVP+DV+  I+  L  +DPV+L+VG D FTA+ +ERE+A+RS  FV DGGAWG  VQ+ R+ H+PH + E  +S+ M++ W++AGSPT   ++    V++ +    T  P A++
Sbjct:  422 MRAPIAINPDVLAHFFPAKHISDYIDERFPALNTTLFVKLRWSSTTCDKAHTKNGTVCIFLDSIVPVQTYVNAIAHAADMIGATAIYLAVPLHVPDDVTEYIAEHLNVMDPVLLEVGGDLFTANTLERELAVRSVGFVPDGGAWGNCVQKTRQSHFPHAYDENIDSITMIQNWKDAGSPTASSLLRDGVVKQQH--TNTHKPQAAS 625

The following BLAST results are available for this feature:

BLAST of Gcaud7765.t1 vs. uniprot

BLAST of Gcaud7765.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QD49_CHOCR	9.280e-54	44.17	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..282

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_228_length_35511_cov_4.360474	contig	NODE_228_length_35511_cov_4.360474:32349..33575 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7765.t1	Gcaud7765.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_228_length_35511_cov_4.360474 32349..33575 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7765.t1 ID=Gcaud7765.t1|Name=Gcaud7765.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=409bp
MRSAIAFNRDVVEHFKSAPRVDDYASSKYPKMNETLFVKLRWNEAHCNEK
RNEDGTVCILSGEILSTDDYVNSIAYAATTVGASKIYISAPPHVPEDVSA
QISSKLRPVDPVVLDVGSDFFTASVIEREMALRSRAFVADGGAWGESVQE
ARRMHYPHLFKEGYNSLLMVEEWRNAGSPTELPIIMASHVQEDYMENETS
NPGASAGDQSPATDTSLNYDQQAEAPDTSSSETGGPDLGSVNAKPLQPEP
EQDSVEIGAASDPGSANAMPRQQESEPVNEGTEITPNLEGGDVAPAQPEG
GYVNEGAEVMQGTTPETQPPEGLPTQSRPEAYEPPQTYSASQETDHHLFP
DGQIPERKFVDQPPVVAEGGGQAAYIPQNGPNSDVVRIVSGDGGDNAPHQ
GGEGEQSP*