Gcaud776.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud776.t1
Unique NameGcaud776.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length261
Homology
BLAST of Gcaud776.t1 vs. uniprot
Match: A0A2V3IHQ4_9FLOR (Protein RMD5-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHQ4_9FLOR)

HSP 1 Score: 330 bits (847), Expect = 3.030e-109
Identity = 177/288 (61.46%), Postives = 214/288 (74.31%), Query Frame = 0
Query:    1 MDPILNEYSAMLRRHHKATRAAEGAIDSMLSSLKALRVALDDEQGTHQTAKIEPVKEEPELR--PQQHH-------------------------LMHKL---YCASKSLQSSLLTDHKSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRDHIIGVQKLMTCLLDAPSLLKSPYKALCS 258
            M+ ILNEY+ ML+R  KATR+AE A+DSMLS+++++R AL    G      I PVKEEPEL+  P   H                         +MH+L   +CA+KSLQ+SLLTDHKSVGAAINKFG+ I++AT++ L D+CA SVR NTCKINEA+A HL REGLFDVGRNFLLEASVLLDD HIQPFEQLYHIL AF N++L PAI+W Q+N+ LL++  S+LEFRLHRLAYL+L QQ+RR EAL+YAQRHF NF++HI  VQKLMTCLL AP+L KSPYK L S
Sbjct:    1 MESILNEYAVMLKRRQKATRSAETALDSMLSTIRSMRDALQQPNGNSHPTHIHPVKEEPELQESPSDPHAMQIEPSAANTNITTTTSESDTPSIVMHRLQQLHCATKSLQASLLTDHKSVGAAINKFGRTIDAATSTTLADLCAPSVRLNTCKINEAIATHLFREGLFDVGRNFLLEASVLLDDSHIQPFEQLYHILTAFRNHNLTPAIQWAQSNHQLLKQSNSHLEFRLHRLAYLNLLQQNRRSEALKYAQRHFRNFQNHINSVQKLMTCLLYAPNLSKSPYKNLVS 288          
BLAST of Gcaud776.t1 vs. uniprot
Match: A0A7C9ESM5_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ESM5_OPUST)

HSP 1 Score: 115 bits (287), Expect = 2.670e-26
Identity = 74/200 (37.00%), Postives = 108/200 (54.00%), Query Frame = 0
Query:   67 HLMHKLYCASKSLQ-------SSLLTDHKSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFR-DHIIGVQKLMTCLLDAPSLLKSPYKALCS 258
            HL HK   A    +       S L    K +  A++K+ K +E +   ++     R+V  +T  IN+ +A+HL REGLFDVG  F  EA          PF ++YHI++A  +++L PA+ W   N   LR+  S+LE +LHRL Y+ + Q+  R +AL+YA+ +   F   H+  +QKLM CLL A  L  SPY  L S
Sbjct:   44 HLDHKTILADLKARLKEIAPLSHLEPSQKELNVALSKYSKQLEKSLNPDISK-AYRNVDFDTHTINQIIASHLYREGLFDVGDCFANEAGQPDAAAMKSPFIEMYHIVQAMKSHNLEPALNWTAANSEKLRENGSDLELKLHRLQYVEILQKRGRDDALKYARTYLSPFATSHMAEIQKLMACLLWAGKLESSPYLDLLS 242          
BLAST of Gcaud776.t1 vs. uniprot
Match: UPI000B79444E (protein RMD5 homolog A-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B79444E)

HSP 1 Score: 109 bits (272), Expect = 3.970e-24
Identity = 63/178 (35.39%), Postives = 101/178 (56.74%), Query Frame = 0
Query:   80 QSSLLTDHKSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRD-HIIGVQKLMTCLLDAPSLLKSPYKAL 256
            ++ L +  K +   ++K+ K +E +   ++     R+V  N+  +N+ +A+HL REGLF+VG  F  EA          PF ++YHI +A  +++L PA++W   N  +L++  S+LE +LHRL Y+ + Q   R +AL+YA+     F   H+  +QKLM CLL A  L  SPY  L
Sbjct:   71 RAQLESSQKELNGPLSKYPKQLEKSFNPDISK-AYRNVDFNSHTVNQIIASHLYREGLFEVGDCFANEAGEHEATALKSPFIEMYHIQQAMKSHNLEPALKWASANREILKQNGSDLELKLHRLQYVEILQNQGRDDALKYARTFLSPFASSHMAEIQKLMACLLWAGKLDSSPYSDL 247          
BLAST of Gcaud776.t1 vs. uniprot
Match: A0A6P5YK75_DURZI (protein RMD5 homolog A-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5YK75_DURZI)

HSP 1 Score: 108 bits (269), Expect = 1.000e-23
Identity = 63/180 (35.00%), Postives = 106/180 (58.89%), Query Frame = 0
Query:   81 SSLLTDHKSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQ-PFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFR-DHIIGVQKLMTCLLDAPSLLKSPYKALCS 258
            S L    K +   ++K+ K +E A   ++  M  R++  ++  +N+ +A+H  R+G+FDVG  F+ EA    +   ++ PF ++Y IL+A  + +L PA++W  TN + L++  S+L  RLH L ++ + Q++ R EAL YA+ +F  F  +H+  +QKLM CLL +  L  SPY  L S
Sbjct:   67 SQLEGTQKELNIVLSKYPKALEKALNPDIS-MAYRNIEFDSHTVNQIIASHFYRQGMFDVGDCFVTEAGDAEEAAAMKSPFLEMYQILEAMRSRNLEPALKWAATNSNKLKENGSDLLLRLHHLQFVKILQKESRDEALMYARTNFATFAGNHMAEIQKLMGCLLYSDRLHDSPYTHLLS 245          
BLAST of Gcaud776.t1 vs. uniprot
Match: A0A103XKL4_CYNCS (CRA domain-containing protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XKL4_CYNCS)

HSP 1 Score: 106 bits (265), Expect = 3.960e-23
Identity = 66/175 (37.71%), Postives = 103/175 (58.86%), Query Frame = 0
Query:   88 KSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEA---SVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRD-HIIGVQKLMTCLLDAPSLLKSPYKALCS 258
            K +  A++K+ K +E     ++     R+V  +   IN+ +A+H  REG+FD+G  F+ EA   SV+    H   F ++Y IL++  +  L PA++W  TN+  LR+  S++E +LHRL ++ + Q  RR EAL+YA+ +F  F + H+  +QKLM CLL A  L  SPY  L S
Sbjct:   80 KELNLALSKYIKLLEKHFNPDIS-RSYRNVDFDLHTINQIIASHFYREGMFDIGDCFVNEAHEESVVDRKTH---FLEMYQILESMKSRDLGPALKWATTNHEKLRQNGSDIELKLHRLQFMEILQHGRRDEALKYARAYFSPFANQHLPEIQKLMACLLWAGKLESSPYSELLS 250          
BLAST of Gcaud776.t1 vs. uniprot
Match: UPI00053FBD09 (protein RMD5 homolog A n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FBD09)

HSP 1 Score: 106 bits (264), Expect = 5.350e-23
Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 0
Query:   81 SSLLTDHKSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRD-HIIGVQKLMTCLLDAPSLLKSPYKAL 256
            S L +  K +   ++K+ K +E +  S++     R++  +   IN+ +A+HL REGLF+VG  F  EA V        PF +++HI +A  +++L PA+ W   N   LR+  S++E +LHRL Y+ + Q   R +AL+YA+     F   H+  +QKLM CLL A  L  SPY  L
Sbjct:   72 SQLDSIQKELNGPLSKYPKQLEKSFTSDISKSY-RNIDFDNHTINQIIASHLYREGLFEVGDCFADEAGVPEATALKSPFIEMFHIRQAMKSHNLEPALNWATANCEKLRQNGSDIELKLHRLQYVKILQSQGRDDALKYARTFLSPFASSHMAEIQKLMACLLWAGKLDASPYSDL 247          
BLAST of Gcaud776.t1 vs. uniprot
Match: A0A0K9QT05_SPIOL (Uncharacterized protein n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9QT05_SPIOL)

HSP 1 Score: 105 bits (263), Expect = 7.400e-23
Identity = 65/177 (36.72%), Postives = 96/177 (54.24%), Query Frame = 0
Query:   81 SSLLTDHKSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRD-HIIGVQKLMTCLLDAPSLLKSPYKAL 256
            S L +  K +   ++K+ K +E +   ++     R+V  +   INE +A+HL REGLF+VG  F  EA          PF ++YHI +A  +  L PA++W   N   L++  S+LE +LHRL Y+ + Q   R +AL+YA+     F   H+  +QKLM CLL A  L  SPY  L
Sbjct:   72 SQLESSQKELNGPLSKYPKQLEKSFNPDISK-AYRNVDFDIHTINEIIASHLYREGLFEVGDCFANEAGEEEATALKSPFIEMYHIHQAMKSRDLEPALKWASANCEKLKQSGSDLELKLHRLQYVEILQNQGRDDALKYARTFLSPFASSHMAEIQKLMACLLWAGKLDASPYSDL 247          
BLAST of Gcaud776.t1 vs. uniprot
Match: A0A0E9NA22_SAICN (Uncharacterized protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NA22_SAICN)

HSP 1 Score: 105 bits (262), Expect = 1.300e-22
Identity = 67/181 (37.02%), Postives = 95/181 (52.49%), Query Frame = 0
Query:   79 LQSSLLTDHKSVGAAINKFGKNIESATASNLGDMC--ARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRD-HIIGVQKLMTCLLDAPSLLKSPYKAL 256
            + S +  D K V   + K+GK I+    +NL D+    R+       +NE +A H VR+G F +   F+ EA++ +       FE++Y IL+A     L PAI W  T    L +  SNLEF LHRLA++ LF   + PEAL YA+  F  F   H+  +QKLM     A +L  SPY +L
Sbjct:   83 ITSRMNEDMKKVYNGLGKYGKAIDKTFKANL-DLVNNERAFEGKEHVVNETIAMHFVRQGQFGLANTFIEEANIDIKPDVQARFEEMYRILEALRQKQLEPAITWSSTRRPYLDQHGSNLEFDLHRLAFIQLFTSGQIPEALVYARTQFPTFSTRHLPAIQKLMCAFAYARNLRNSPYASL 262          
BLAST of Gcaud776.t1 vs. uniprot
Match: UPI001CB94CE8 (protein RMD5 homolog n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB94CE8)

HSP 1 Score: 103 bits (257), Expect = 5.090e-22
Identity = 63/173 (36.42%), Postives = 100/173 (57.80%), Query Frame = 0
Query:   88 KSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEA-SVLLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRD-HIIGVQKLMTCLLDAPSLLKSPYKALCS 258
            K +  A+ K+ K +E    S++     R+V  +   +N+ +A+H  REGLFD+G  F  E+    + DR    F ++Y IL++  +  L PA+ W  TN+  L++  S+++ +LHRL ++ + Q   R EALQYA+++F  F + H+  +QKLM CLL A  L  SPY  L S
Sbjct:   77 KELNLALTKYTKLLEKQFNSDISKSY-RNVDFDFHLVNQIIASHFYREGLFDIGDCFANESHEETIIDRKTH-FLEMYQILESMKSRDLGPALNWATTNHEKLQQKGSDIQMKLHRLQFMEILQHGHRDEALQYARKYFSLFANQHLPEIQKLMGCLLWAGKLESSPYPELLS 247          
BLAST of Gcaud776.t1 vs. uniprot
Match: B9SSC9_RICCO (Sporulation protein RMD5, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9SSC9_RICCO)

HSP 1 Score: 102 bits (254), Expect = 6.920e-22
Identity = 60/181 (33.15%), Postives = 99/181 (54.70%), Query Frame = 0
Query:   81 SSLLTDHKSVGAAINKFGKNIESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASVLLDDRHIQ-PFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRLHRLAYLHLFQQDRRPEALQYAQRHFCNFRDHIIG-VQKLMTCLLDAPSLLKSPYKALCSA 259
            S L +  K +  A++K+ K +E +   ++     R++  +   +N+ +A H  R+GLF +G  F+ EA        ++ PF ++Y IL+A  + +L PA++W   N   L++  S+L+ +LHRL ++ + Q   R +AL Y + H   F     G +QKLM CLL A  L +SPY  L SA
Sbjct:   20 SQLESTQKELNVALSKYPKQLEKSFNPDISK-AYRNINFDIHTVNQIIAGHFYRQGLFSIGDCFINEAKEPESTAAMRSPFSEMYIILEAMKDRNLEPALKWAAANSDKLKESGSDLQLKLHRLQFVEILQNGSRSDALTYVRTHITPFASSSFGEIQKLMACLLYAGKLDRSPYAELLSA 199          
The following BLAST results are available for this feature:
BLAST of Gcaud776.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHQ4_9FLOR3.030e-10961.46Protein RMD5-like n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A7C9ESM5_OPUST2.670e-2637.00Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]
UPI000B79444E3.970e-2435.39protein RMD5 homolog A-like n=1 Tax=Chenopodium qu... [more]
A0A6P5YK75_DURZI1.000e-2335.00protein RMD5 homolog A-like n=1 Tax=Durio zibethin... [more]
A0A103XKL4_CYNCS3.960e-2337.71CRA domain-containing protein n=1 Tax=Cynara cardu... [more]
UPI00053FBD095.350e-2336.16protein RMD5 homolog A n=1 Tax=Beta vulgaris subsp... [more]
A0A0K9QT05_SPIOL7.400e-2336.72Uncharacterized protein n=3 Tax=Chenopodioideae Ta... [more]
A0A0E9NA22_SAICN1.300e-2237.02Uncharacterized protein n=2 Tax=Saitoella complica... [more]
UPI001CB94CE85.090e-2236.42protein RMD5 homolog n=1 Tax=Erigeron canadensis T... [more]
B9SSC9_RICCO6.920e-2233.15Sporulation protein RMD5, putative n=2 Tax=Ricinus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 160..258
e-value: 1.7E-14
score: 54.0
IPR045098Fyv10 familyPANTHERPTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDcoord: 25..258
IPR027711Rmd5PANTHERPTHR12170:SF3GH10162Pcoord: 25..258
IPR006595CTLH, C-terminal LisH motifPROSITEPS50897CTLHcoord: 159..216
score: 8.332106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_864_length_16904_cov_4.610361contigNODE_864_length_16904_cov_4.610361:97..947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud776.t1Gcaud776.t1Gracilaria caudata M_176_S67 malemRNANODE_864_length_16904_cov_4.610361 97..947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud776.t1 ID=Gcaud776.t1|Name=Gcaud776.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=261bp
MDPILNEYSAMLRRHHKATRAAEGAIDSMLSSLKALRVALDDEQGTHQTA
KIEPVKEEPELRPQQHHLMHKLYCASKSLQSSLLTDHKSVGAAINKFGKN
IESATASNLGDMCARSVRPNTCKINEAMAAHLVREGLFDVGRNFLLEASV
LLDDRHIQPFEQLYHILKAFCNNHLAPAIEWPQTNYHLLRKPISNLEFRL
HRLAYLHLFQQDRRPEALQYAQRHFCNFRDHIIGVQKLMTCLLDAPSLLK
SPYKALCSAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024964CTLH/CRA
IPR045098Fyv10_fam
IPR027711Rmd5
IPR006595CTLH_C