Gcaud7749.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7749.t1
Unique NameGcaud7749.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length159
Homology
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BLAST of Gcaud7749.t1 vs. uniprot
Match: R7QIW7_CHOCR (Adrenodoxin, putative (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIW7_CHOCR)

HSP 1 Score: 190 bits (483), Expect = 6.620e-60
Identity = 92/127 (72.44%), Postives = 108/127 (85.04%), Query Frame = 0 
Query:   32 DDDAARAHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            DDD     A++V+ TFV+R+G+ERVV  + G SLLQIAH   +DLEGACEGSLACSTCHVYL+Q++FD LD+PCDDENDMLDLAF LSE+SRLGCQV ++  L G+RVTLPPATRNMAVDGFVPQPH
Sbjct:    2 DDDP----AAQVTVTFVDREGAERVVTAKPGLSLLQIAHANAVDLEGACEGSLACSTCHVYLEQSAFDALDDPCDDENDMLDLAFGLSEVSRLGCQVNVTTDLDGIRVTLPPATRNMAVDGFVPQPH 124
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BLAST of Gcaud7749.t1 vs. uniprot
Match: A0A2V3IWT5_9FLOR (Adrenodoxin-like protein 1, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWT5_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 4.800e-58
Identity = 88/119 (73.95%), Postives = 103/119 (86.55%), Query Frame = 0 
Query:   40 ASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            ++ ++ TFV+RDG+   ++   G SLL++AH   IDLEGACEGSLACSTCHVYLDQ SFD L EPCDDENDMLDLAFAL+ELSRLGCQVK++ QL+GM+VTLPPATRNMAVDGFVPQPH
Sbjct:   52 STAIALTFVDRDGARHALKAPPGASLLEVAHANHIDLEGACEGSLACSTCHVYLDQPSFDLLAEPCDDENDMLDLAFALTELSRLGCQVKMNPQLEGMQVTLPPATRNMAVDGFVPQPH 170
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BLAST of Gcaud7749.t1 vs. uniprot
Match: A0A7S1XC96_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XC96_9RHOD)

HSP 1 Score: 168 bits (426), Expect = 1.140e-50
Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 0 
Query:   43 VSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            V  +FV+R+G    +    G+SLL++AH   +DLEGACEGSLACSTCHVYLD+ S+ KL EP DDENDMLDLAF LSE SRLGCQVK+SK L GM V LPPATRNMAVDG+VP+PH
Sbjct:   50 VDISFVDREGGVMQIAAPLGKSLLEVAHSNSVDLEGACEGSLACSTCHVYLDEISYGKLSEPTDDENDMLDLAFGLSETSRLGCQVKVSKDLAGMTVRLPPATRNMAVDGYVPKPH 165
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BLAST of Gcaud7749.t1 vs. uniprot
Match: M1V9G8_CYAM1 (Probable adrenodoxin n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V9G8_CYAM1)

HSP 1 Score: 162 bits (411), Expect = 4.000e-47
Identity = 81/128 (63.28%), Postives = 98/128 (76.56%), Query Frame = 0 
Query:   31 ADDDAARAHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            A+++ A A A  +S TFV+R+G    VR   G S+L++AHE  IDLEGACEGSLACSTCHVY+ +  F +L EP DDENDMLDLAF L E SRLGCQV  +K+L GM +TLP ATRNMAVDG+VP+PH
Sbjct:  138 AEENPAEA-AETISVTFVDREGVRHAVRAPIGSSMLEVAHENHIDLEGACEGSLACSTCHVYVSEEHFRRLPEPTDDENDMLDLAFGLQENSRLGCQVIATKELDGMELTLPKATRNMAVDGYVPKPH 264
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BLAST of Gcaud7749.t1 vs. uniprot
Match: A0A0L0SP51_ALLM3 (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SP51_ALLM3)

HSP 1 Score: 159 bits (401), Expect = 5.540e-47
Identity = 81/137 (59.12%), Postives = 98/137 (71.53%), Query Frame = 0 
Query:   22 ATAKRLHRTADDDAARAHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            ATA R H  A      A + +   TFV  +G   VV+  E ESLL +AH   IDLEGACEGSLACSTCHV +D A +DK+ EP D+ENDMLDLAF L++ SRLGCQV + K+L G++VT+P ATRNMAVDGF P+PH
Sbjct:   26 ATALRAHGKAT-----AGSGDFHVTFVTAEGDTVVVKADENESLLDVAHANDIDLEGACEGSLACSTCHVVVDPAFYDKIPEPTDEENDMLDLAFGLTDTSRLGCQVAMCKELDGIKVTIPSATRNMAVDGFKPKPH 157
[Close]
BLAST of Gcaud7749.t1 vs. uniprot
Match: A0A7J7IM52_9RHOD (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM52_9RHOD)

HSP 1 Score: 159 bits (403), Expect = 1.460e-46
Identity = 77/121 (63.64%), Postives = 90/121 (74.38%), Query Frame = 0 
Query:   38 AHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            A    +S TFV+RDG  R VR   G S+LQ+AHE  IDLEGACEGSLACSTCHVY+ +    +L EP D+ENDMLDLAF L E SRLGCQ+  S+ L GM +TLP ATRNMAVDG+V +PH
Sbjct:   92 AEVETISVTFVDRDGVRRPVRAPIGSSMLQVAHENSIDLEGACEGSLACSTCHVYVSEPHLKRLSEPSDEENDMLDLAFGLQENSRLGCQIIASRDLDGMELTLPQATRNMAVDGYVAKPH 212
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BLAST of Gcaud7749.t1 vs. uniprot
Match: A0A075AY65_ROZAC (2Fe-2S ferredoxin-like protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AY65_ROZAC)

HSP 1 Score: 156 bits (394), Expect = 3.660e-46
Identity = 72/122 (59.02%), Postives = 95/122 (77.87%), Query Frame = 0 
Query:   37 RAHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            R  ++ V+ TFV  +G    V+ +EG++LL++AHE  +DLEGACEGSLACSTCHV L++  + KL EP D+ENDMLDLAF L++ SRLGCQVK+S  L GM++T+P  TRNMAVDG+ P+PH
Sbjct:   18 RNKSNLVNVTFVTAEGENVKVQAKEGQNLLELAHENNVDLEGACEGSLACSTCHVILEEEIYKKLPEPSDEENDMLDLAFGLTDTSRLGCQVKVSSALNGMKITVPKVTRNMAVDGYKPKPH 139
[Close]
BLAST of Gcaud7749.t1 vs. uniprot
Match: A0A7S0D711_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D711_MICPS)

HSP 1 Score: 155 bits (393), Expect = 7.770e-46
Identity = 78/124 (62.90%), Postives = 94/124 (75.81%), Query Frame = 0 
Query:   36 ARAHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLD-QASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            A + A  ++ TF  +DGSE  VR   G S+L++AH   I+LEGACEGSLACSTCHV +D QA +D L EP DDENDMLDLAF L+E SRLGCQV  +K+L GM ++LP ATRN AVDGFVP+PH
Sbjct:   29 APSDAETIAVTFHEKDGSETTVRAAIGHSMLEVAHRNDIELEGACEGSLACSTCHVIIDDQAVYDALPEPDDDENDMLDLAFGLTETSRLGCQVIAAKELDGMTLSLPRATRNFAVDGFVPKPH 152
[Close]
BLAST of Gcaud7749.t1 vs. uniprot
Match: M2WVE3_GALSU (Adrenodoxin-like ferredoxin 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WVE3_GALSU)

HSP 1 Score: 155 bits (391), Expect = 1.560e-45
Identity = 75/122 (61.48%), Postives = 92/122 (75.41%), Query Frame = 0 
Query:   37 RAHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            +A    +  TFV +DG+++ +    G+ +LQ+AHE  IDLEGACEGSLACSTCHVYLD+ S++KL EP DDENDMLDLAF L+E SRLGCQV  S +L GM +TLPPATRNM VD  V + H
Sbjct:   31 QAEKETIRVTFVLQDGTKKEIEAPIGKHILQLAHEHDIDLEGACEGSLACSTCHVYLDEKSYNKLPEPSDDENDMLDLAFGLTEYSRLGCQVVASPELDGMVITLPPATRNMMVDAHVSKHH 152
[Close]
BLAST of Gcaud7749.t1 vs. uniprot
Match: C1N5Z3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N5Z3_MICPC)

HSP 1 Score: 153 bits (386), Expect = 4.540e-45
Identity = 75/133 (56.39%), Postives = 99/133 (74.44%), Query Frame = 0 
Query:   27 LHRTADDDAARAHASEVSFTFVNRDGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYL-DQASFDKLDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAVDGFVPQPH 158
            +H    DD    +A  +  TF+ +DG+E  V+   G+S+L++AH+  I+LEGACEGSLACSTCHV + D+  +D L EP DDENDMLDLAF L+E SRLGCQV  +K++ G+R++LP ATRN AVDGFVP+PH
Sbjct:    1 MHGHGKDD---PNAETIDVTFIEKDGTETKVKAPIGQSMLEVAHKNDIELEGACEGSLACSTCHVIIEDEKVYDALPEPDDDENDMLDLAFGLTETSRLGCQVIAAKEIDGLRLSLPRATRNFAVDGFVPKPH 130
The following BLAST results are available for this feature:
BLAST of Gcaud7749.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QIW7_CHOCR6.620e-6072.44Adrenodoxin, putative (Fragment) n=1 Tax=Chondrus ... [more]
A0A2V3IWT5_9FLOR4.800e-5873.95Adrenodoxin-like protein 1, mitochondrial n=1 Tax=... [more]
A0A7S1XC96_9RHOD1.140e-5068.97Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M1V9G8_CYAM14.000e-4763.28Probable adrenodoxin n=1 Tax=Cyanidioschyzon merol... [more]
A0A0L0SP51_ALLM35.540e-4759.122Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7J7IM52_9RHOD1.460e-4663.642Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A075AY65_ROZAC3.660e-4659.022Fe-2S ferredoxin-like protein n=1 Tax=Rozella all... [more]
A0A7S0D711_MICPS7.770e-4662.90Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
M2WVE3_GALSU1.560e-4561.48Adrenodoxin-like ferredoxin 1 n=1 Tax=Galdieria su... [more]
C1N5Z3_MICPC4.540e-4556.39Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001055AdrenodoxinPRINTSPR00355ADRENODOXINcoord: 80..90
score: 78.1
coord: 122..130
score: 68.69
coord: 99..113
score: 53.03
IPR001055AdrenodoxinPANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 31..158
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 50..130
e-value: 1.3E-12
score: 47.4
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 43..145
score: 10.965606
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 48..140
e-value: 9.07702E-12
score: 55.864
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 37..153
e-value: 1.1E-43
score: 149.8
NoneNo IPR availablePANTHERPTHR23426:SF54ADRENODOXIN-LIKE PROTEIN 1, MITOCHONDRIAL-RELATEDcoord: 31..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
IPR018298Adrenodoxin, iron-sulphur binding sitePROSITEPS00814ADXcoord: 80..90
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 45..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1750_length_8626_cov_4.465026contigNODE_1750_length_8626_cov_4.465026:2237..2797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7749.t1Gcaud7749.t1Gracilaria caudata M_176_S67 malemRNANODE_1750_length_8626_cov_4.465026 2237..2797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7749.t1 ID=Gcaud7749.t1|Name=Gcaud7749.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=159bp
MRVRELRVRPLCASAAGGALRATAKRLHRTADDDAARAHASEVSFTFVNR
DGSERVVRGREGESLLQIAHERGIDLEGACEGSLACSTCHVYLDQASFDK
LDEPCDDENDMLDLAFALSELSRLGCQVKLSKQLQGMRVTLPPATRNMAV
DGFVPQPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001055Adrenodoxin
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR018298Adrenodoxin_Fe-S_BS
IPR0360102Fe-2S_ferredoxin-like_sf