Gcaud7721.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7721.t1
Unique NameGcaud7721.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length144
Homology
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BLAST of Gcaud7721.t1 vs. uniprot
Match: A0A2V3J692_9FLOR (Inhibitor of growth protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J692_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 2.690e-37
Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 0 
Query:    1 MAYRASERRERAQD---------SYAPSYLDDFLDLIEPLQASTKTTFADIKTLDDRIQTSLSLADSAADDTVARANSSVAIASVRRQYQEFLNQQLNVQELSDKKVALAAAALGGLDDVLTQLDNRFL 120
            MAYRA +RRER+ +         S   SYLDDFLD I+PLQ STK TFA+IK+LDDR Q++L+LA +AA++TV+R+NSS  IASVRRQYQEF+N Q NV+E SDKKV LA  AL  LD VL  LD + +
Sbjct:    1 MAYRAPDRRERSHEPQSSQFARASQPVSYLDDFLDKIDPLQNSTKATFAEIKSLDDRAQSTLALAQTAAEETVSRSNSSAPIASVRRQYQEFINHQANVKEFSDKKVTLATDALHSLDAVLEDLDRKLI 129
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BLAST of Gcaud7721.t1 vs. uniprot
Match: R7QEF7_CHOCR (Inhibitor of growth protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEF7_CHOCR)

HSP 1 Score: 86.7 bits (213), Expect = 1.530e-17
Identity = 52/119 (43.70%), Postives = 79/119 (66.39%), Query Frame = 0 
Query:    1 MAYRA-SERRERAQDSYAPSYLDDFLDLIEPLQASTKTTFADIKTLDDRIQTSLSLADSAADDTVARANSS-VAIASVRRQYQEFLNQQLNVQELSDKKVALAAAALGGLDDVLTQLDN 117
            MAYR  ++RRE A  ++  SYLDDFLD IEPL A+TK+ F +++ LDDRI T++  AD    + ++RA +  VA+ +V+R + EF++ Q +  E +DKKV +A  A    D+VL  L++
Sbjct:    1 MAYRLPTDRREAAMTAHNTSYLDDFLDQIEPLPANTKSLFHEMRQLDDRIDTTVGEADMTLKEAISRATTKGVALENVKRTFHEFVHLQTSAAEFADKKVRIAKEAR---DNVLESLND 116
The following BLAST results are available for this feature:
BLAST of Gcaud7721.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J692_9FLOR2.690e-3759.69Inhibitor of growth protein n=1 Tax=Gracilariopsis... [more]
R7QEF7_CHOCR1.530e-1743.70Inhibitor of growth protein n=1 Tax=Chondrus crisp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024610Inhibitor of growth protein, N-terminal histone-bindingSMARTSM01408ING_2coord: 20..122
e-value: 8.0E-8
score: 42.0
IPR024610Inhibitor of growth protein, N-terminal histone-bindingPFAMPF12998INGcoord: 20..119
e-value: 8.0E-12
score: 45.6
NoneNo IPR availableGENE3D6.10.140.1740coord: 17..119
e-value: 1.6E-10
score: 43.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1416_length_10833_cov_3.444331contigNODE_1416_length_10833_cov_3.444331:5632..6478 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7721.t1Gcaud7721.t1Gracilaria caudata M_176_S67 malemRNANODE_1416_length_10833_cov_3.444331 5632..6478 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7721.t1 ID=Gcaud7721.t1|Name=Gcaud7721.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=144bp
MAYRASERRERAQDSYAPSYLDDFLDLIEPLQASTKTTFADIKTLDDRIQ
TSLSLADSAADDTVARANSSVAIASVRRQYQEFLNQQLNVQELSDKKVAL
AAAALGGLDDVLTQLDNRFLVVRWWRVRTMIVLTNGFISSAWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024610ING_N_histone-binding