Gcaud7698.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7698.t1
Unique NameGcaud7698.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length75
Homology
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BLAST of Gcaud7698.t1 vs. uniprot
Match: A0A2V3J1S0_9FLOR (DNL-type zinc finger protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1S0_9FLOR)

HSP 1 Score: 61.6 bits (148), Expect = 5.600e-10
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:    1 MGMYAHLTGGRRNVEEIARDTGVNVTRVSSSTFNLEKLVSNVMDE 45
            MGMY HLTGG++NVEEIA+  G+N TRV+ S F LEKL S V+++
Sbjct:  113 MGMYTHLTGGKKNVEEIAKSAGLNFTRVNPSVFGLEKLNSQVVED 157
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BLAST of Gcaud7698.t1 vs. uniprot
Match: R7QFS4_CHOCR (DNL-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFS4_CHOCR)

HSP 1 Score: 53.5 bits (127), Expect = 5.880e-7
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    2 GMYAHLTGGRRNVEEIARDTGVNVTRVSSSTFNLEKLVS 40
            GM+AHLTGGR+NVEEIA+DTG   TRV + +F L+   S
Sbjct:  128 GMFAHLTGGRKNVEEIAKDTGAAFTRVGTDSFQLDNSYS 166
The following BLAST results are available for this feature:
BLAST of Gcaud7698.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1S0_9FLOR5.600e-1062.22DNL-type zinc finger protein n=1 Tax=Gracilariopsi... [more]
R7QFS4_CHOCR5.880e-761.54DNL-type domain-containing protein n=1 Tax=Chondru... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_528_length_22897_cov_4.686837contigNODE_528_length_22897_cov_4.686837:13435..13748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7698.t1Gcaud7698.t1Gracilaria caudata M_176_S67 malemRNANODE_528_length_22897_cov_4.686837 13435..13748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7698.t1 ID=Gcaud7698.t1|Name=Gcaud7698.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=75bp
MGMYAHLTGGRRNVEEIARDTGVNVTRVSSSTFNLEKLVSNVMDEGSTDG
GDALRRNVDSESKVENQEPGAEDQ*
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