Gcaud7681.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7681.t1
Unique NameGcaud7681.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length307
Homology
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BLAST of Gcaud7681.t1 vs. uniprot
Match: R7QG50_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG50_CHOCR)

HSP 1 Score: 134 bits (337), Expect = 1.490e-32
Identity = 81/186 (43.55%), Postives = 111/186 (59.68%), Query Frame = 0 
Query:  109 LQKASELLVKALRSAEDKDEAGLAYAELSLTYGQVMLGFVIRRATGGGVLGSGVNTE--DAEEDVVEXXXXEQITWTQLEIARVTFEKLVAGGNERLRARLAQTHRTLGELLVALDQASQAGAEFFKASELCEGRERAECLHKQYLAMRREDKAVAGEALRKCITALEGASGARDEDVLRELRDEL 292
            LQ+A+ L V  L S  D+ +    +AEL   YG+ +LGFV +     GVLG+    +   AEED+ +    E++ WTQLE ARV FE+LV GG +R  +RL   H  LG+LL+  D    A  E+  AS L  GR +AE L+KQYLAMRR+    A EAL++ + A E A    DE+ ++ELR+EL
Sbjct:  209 LQEATRLFVLLLTSVPDEAQESAGFAELLTGYGKSLLGFVRKAGQRQGVLGAKAKGDAAPAEEDLEDEDDNEELAWTQLEAARVAFERLVKGGADRFNSRLGDVHGCLGDLLLEGDAWEAASREYDIASTLLSGRRKAEVLYKQYLAMRRDAAVKAVEALKESVRAFEDAES--DEETIKELREEL 392
The following BLAST results are available for this feature:
BLAST of Gcaud7681.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QG50_CHOCR1.490e-3243.55Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2899_length_4434_cov_3.714253contigNODE_2899_length_4434_cov_3.714253:8..926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7681.t1Gcaud7681.t1Gracilaria caudata M_176_S67 malemRNANODE_2899_length_4434_cov_3.714253 8..926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7681.t1 ID=Gcaud7681.t1|Name=Gcaud7681.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=307bp
MQIEGDQMQPLNSIEEHGDGAKDAHNMASANNDHSEQLPKDAKHAQDAQD
VPSVSNNDEHHTAAVVKGQLSKQQKEISKMIAVSVGDEAAKQYTQATEII
HSAPDDGALQKASELLVKALRSAEDKDEAGLAYAELSLTYGQVMLGFVIR
RATGGGVLGSGVNTEDAEEDVVEEEEEEQITWTQLEIARVTFEKLVAGGN
ERLRARLAQTHRTLGELLVALDQASQAGAEFFKASELCEGRERAECLHKQ
YLAMRREDKAVAGEALRKCITALEGASGARDEDVLRELRDELRVLGADGA
ASGGDGX
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