Gcaud7674.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7674.t1
Unique NameGcaud7674.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length632
Homology
BLAST of Gcaud7674.t1 vs. uniprot
Match: A0A2V3IK38_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK38_9FLOR)

HSP 1 Score: 511 bits (1317), Expect = 9.440e-171
Identity = 340/654 (51.99%), Postives = 411/654 (62.84%), Query Frame = 0
Query:   26 HPATCIETGKYAYTAFSRRALQQVQPDDDGDDTLDKDLNVKDSEHLTDAAMEQQGIDDAAQAHTSQEKQHD------DLNDVDAQIQEIAKRVGITEEELKQADVLQPDSKPITA-----------------NDATDF--HHHDLLEQQRAKVDADREIILAA----------------------RDGLEQVQPPPEDDDARQPAQAPPEMVAPGQPLLPKPKKHQHSEEQPDSRTNAKSENSELVAQLETYKQRLNDVLKTEQAARDNERGARLEAVQLKKQLQSMKDEIEKVRQLASERDVDLGKLRDSLPQIVMEAKDEKRGEIEEMKETIEEQKRAFDELFEEKQMLSKMLADEQFKLDELQDKIQHPDLGLWISQRAERAAILVEGPETDAIKYYASKYMAPKVTKMKHRLQMLENRVERTVDHLLPAKYGSVVAMLLSIALIGFPVFVTLSTVVSLTKGVSLRQYVLLGNVFLTAFAVGLCVAGLLLRQDPLQTLYEANSGVFIVLQLCIGIAYPAFLAIILLTVLRCRDRLDVFVFGCELLFYAVIGMNYRARVWRPAMLGENIDCGPMMYAVYTMDFLAMMALTVASSRPTELGRFGGHDVEKGRGEEAVE-GSGRMTGGSKGIGSLGSGLMQQLAVGGRRDEKAE 631
            H  T I    +    + RR L+Q Q DD  D  LDKD + K ++ LT+ A   QG++ A           D      D  +VDAQI  IA+  GITEEEL + DV Q   + +                   +DATD     +   EQ  A+ DA ++   A                       RDG  +        DARQ  QAPPEMVAPG+P  P    H    +      +A  + S L  + E Y+QR+  + + EQ AR NER A+               E        SE+ ++  KLR+S  + V EAK EK+ E+EEMK  I        ELFEEKQ+LS+ML+DEQ KL+ELQ+KIQHPDLGLW+ QRAERAAILVEGPETDA+KYYA KYMAPKVTKMKHRLQMLENRVER+VDHLLPAKYG  VAMLLSI LIGFPVFVTLST VSLTK  SLRQ+VL+GNVF TAFAVGLCVAGL+LRQDPLQTLYEA+  +FI+LQL + +AYPAFL +I   VLR RD++DV VFGCEL+FYAVIGMNYR+RVWR AMLGE+ID GPMMYAVY +DF+AMMALTV+SSR       GGHDVE G  + +V  G+GR    ++GI SLGSGL+Q LAVGG+R++K E
Sbjct:   47 HEQTSINAFPHVARLYRRR-LKQEQADDTDD--LDKDQDTKGTDTLTEGAFSAQGVEHADGIPKPNRDDGDAAAEAKDDAEVDAQIAAIARHAGITEEELNRVDVNQDTGRKLEDMVKDVNEASASSIYARDHDATDNLERSNRNAEQASARDDAAQDDGAARKAISKTSNADATNMDVGVGAKDRDGDAEASV----KDARQADQAPPEMVAPGRPNQP----HVLQAKNETKENSAGMDVSSLRTENENYRQRIKSLAEREQNARHNEREAKXXXXXXXXXXXXXXXEKTHADHFVSEQKLENRKLRESFSKSVDEAKVEKQEEMEEMKAAIXXXXXXXXELFEEKQLLSRMLSDEQRKLNELQEKIQHPDLGLWVRQRAERAAILVEGPETDAVKYYAQKYMAPKVTKMKHRLQMLENRVERSVDHLLPAKYGGFVAMLLSIGLIGFPVFVTLSTAVSLTKSFSLRQHVLVGNVFWTAFAVGLCVAGLVLRQDPLQTLYEASRSLFILLQLGMAVAYPAFLMVISCAVLRARDKVDVLVFGCELVFYAVIGMNYRSRVWRAAMLGEHIDTGPMMYAVYMVDFVAMMALTVSSSRTMGGSGMGGHDVEDGFEKLSVHSGAGRGAASARGIVSLGSGLVQ-LAVGGKREQKDE 688          
BLAST of Gcaud7674.t1 vs. uniprot
Match: R7QQZ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ2_CHOCR)

HSP 1 Score: 376 bits (966), Expect = 7.410e-120
Identity = 201/331 (60.73%), Postives = 256/331 (77.34%), Query Frame = 0
Query:  312 IEEQKRAFDELFEEKQMLSKMLADEQFKLDELQDKIQHPDLGLWISQRAERAAILVEGPETDAIKYYASKYMAPKVTKMKHRLQMLENRVERTVDHLLPAKYGSVVAMLLSIALIGFPVFVTLSTVVSLTKGVSLRQYVLLGNVFLTAFAVGLCVAGLLLRQDPLQTLYEANSGVFIVLQLCIGIAYPAFLAIILLTVLRCRDRLDVFVFGCELLFYAVIGMNYRARVWRPAMLGENIDCGPMMYAVYTMDFLAMMALTVASSR--PTELGRFGGH---DVEK------GRGEEAVEGSGRMTGGSKGIGSLGSGLMQQLAVGGRRDEKAE 631
            IEE+KRAFDEL+EEKQ+L ++L +EQ  L +LQ+KIQHPDLGLWI QRAERAAILVE PETDA+K+YA KYMAPKVTKM+HRL +LE RVE++VDHLLP++YGSVVA++L I LIGFPVFVT+STVV++TK VSLRQYVLLGNVFLTAF+ GLC+AG+LL+QDPLQTLYEA+  +F++LQL   + +P F+ +I   VL+ RD+ D+FVFGCEL+FY ++G+NYRARVWRPAMLG NI+   MMY VY +DFL+M ALT++S++   + L  F G    DVE+       + +EA     R +     +G+LGSGLM+    G     K E
Sbjct:  233 IEERKRAFDELYEEKQVLGQILDEEQKTLHDLQEKIQHPDLGLWIRQRAERAAILVETPETDAMKFYARKYMAPKVTKMRHRLALLEKRVEKSVDHLLPSQYGSVVALMLCIGLIGFPVFVTMSTVVTVTKSVSLRQYVLLGNVFLTAFSSGLCIAGILLQQDPLQTLYEASESMFVILQLAAAVVFPVFIGVIFCAVLKARDQEDLFVFGCELVFYILVGLNYRARVWRPAMLGRNIETSRMMYVVYVIDFLSMTALTISSAKVGQSRLPSFVGDSYVDVERDLSAGANKSDEAGGAGPRSS-----LGALGSGLMKAAISGDHSAGKEE 558          
The following BLAST results are available for this feature:
BLAST of Gcaud7674.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IK38_9FLOR9.440e-17151.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQZ2_CHOCR7.410e-12060.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..279
NoneNo IPR availableCOILSCoilCoilcoord: 294..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 573..631
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 472..485
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 536..554
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..412
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 516..535
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 413..437
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 438..448
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 555..572
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 486..509
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 449..471
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 510..515
NoneNo IPR availableTMHMMTMhelixcoord: 555..572
NoneNo IPR availableTMHMMTMhelixcoord: 487..509
NoneNo IPR availableTMHMMTMhelixcoord: 450..472
NoneNo IPR availableTMHMMTMhelixcoord: 416..438
NoneNo IPR availableTMHMMTMhelixcoord: 518..540
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_500_length_23599_cov_4.429981contigNODE_500_length_23599_cov_4.429981:10692..12587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7674.t1Gcaud7674.t1Gracilaria caudata M_176_S67 malemRNANODE_500_length_23599_cov_4.429981 10692..12587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7674.t1 ID=Gcaud7674.t1|Name=Gcaud7674.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=632bp
MRSSNVRKSATFLFAVVALSLVLLAHPATCIETGKYAYTAFSRRALQQVQ
PDDDGDDTLDKDLNVKDSEHLTDAAMEQQGIDDAAQAHTSQEKQHDDLND
VDAQIQEIAKRVGITEEELKQADVLQPDSKPITANDATDFHHHDLLEQQR
AKVDADREIILAARDGLEQVQPPPEDDDARQPAQAPPEMVAPGQPLLPKP
KKHQHSEEQPDSRTNAKSENSELVAQLETYKQRLNDVLKTEQAARDNERG
ARLEAVQLKKQLQSMKDEIEKVRQLASERDVDLGKLRDSLPQIVMEAKDE
KRGEIEEMKETIEEQKRAFDELFEEKQMLSKMLADEQFKLDELQDKIQHP
DLGLWISQRAERAAILVEGPETDAIKYYASKYMAPKVTKMKHRLQMLENR
VERTVDHLLPAKYGSVVAMLLSIALIGFPVFVTLSTVVSLTKGVSLRQYV
LLGNVFLTAFAVGLCVAGLLLRQDPLQTLYEANSGVFIVLQLCIGIAYPA
FLAIILLTVLRCRDRLDVFVFGCELLFYAVIGMNYRARVWRPAMLGENID
CGPMMYAVYTMDFLAMMALTVASSRPTELGRFGGHDVEKGRGEEAVEGSG
RMTGGSKGIGSLGSGLMQQLAVGGRRDEKAE*
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