Gcaud7666.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7666.t1
Unique NameGcaud7666.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length515
Homology
BLAST of Gcaud7666.t1 vs. uniprot
Match: A0A2V3IEX7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEX7_9FLOR)

HSP 1 Score: 486 bits (1250), Expect = 7.950e-165
Identity = 283/522 (54.21%), Postives = 357/522 (68.39%), Query Frame = 0
Query:    1 MATPIVSDLPFTERIDMREKALAWISRDTGLQEFLIPDELTTEWSAEQKKVWTTTVIDRFMSARQH-VGREARARVLARENSSWLRRACVRLQQSLADHRDLTRMAVLLETLWNEVSATFNDSKWAQCSIMFDSALISLRVAYVWLYDKLENEDADLQSRQNVFETVVNSFFNSHAPTDDKADKHSANFRALQRVWRTEFENYANADDLDAKLKRLEESQNLMKVATAVNRFLNAVNVDASWMWDMQKLQEDIKAGNVKRRKTPKKAREPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SDELMRGSMSQRKNNGTMVRRSVRVAQAKSVTYRPTRGEKRGRHRRAAARRAALRFSESPTPSLSDDSPIARRARVTRRAPTRTHEELEMDPNEDVANVGRVSKLTARVGVRRAAPRSGISRGRVLKDTR-----RRRTIRDPRNSGKDAEDDDNMGDEYKGLGSGFGIGTDELHGGLG--GPTIGGSIPGAPVSFPDRKTRMAALL 512
            MA PIV+DLPF+ERI++REK LAWISRD G+QEFLIPDELTTEWS  +K +WTTTVIDRF+ A+ +  G+ AR+RVLAREN+ W+RR CV +QQ LADHR LTR AVLLE LWNEVSA+ +D +WA+CSIMFDSALISLRVAYVWLYDK+ENEDADL+SR+  F TVV+SFF   APTDD+ DKHS+NFR LQRVWRTEF+ Y  +DD  AKL+RL+E+ NL+KVA AV RF++A+NVD SWMW+M++L +D+KAG VKR++  +       XXXXXXXX                                   SD+LMRGSMSQR+NNGT VRRS+RVAQAK+  +RP+R + RGRH+RAAA+RAALRFS SP+PS SD+ P+  R R  +  P  ++E+ E  P    +   R  +   R   RR   R+GISR RV K+ R     RRRT R    +      +D   D+Y        +  DE+  GL   G  +    P AP+SFP+R++R+AA+L
Sbjct:    1 MANPIVTDLPFSERIELREKVLAWISRDVGIQEFLIPDELTTEWSEAEKSLWTTTVIDRFIRAKTNPFGKAARSRVLARENAGWVRRGCVAMQQDLADHRLLTRTAVLLEALWNEVSASLSDLQWAECSIMFDSALISLRVAYVWLYDKIENEDADLESRKQTFTTVVDSFFGGIAPTDDRTDKHSSNFRDLQRVWRTEFDKYTTSDDFGAKLERLQETHNLIKVAAAVGRFMSAINVDPSWMWEMKQLDDDVKAGYVKRKRKQRXXXXXXXXXXXXXXXESFEPHAADSDFDIEIAEKVAASPDNDIDEDMSASSDDLMRGSMSQRRNNGTEVRRSMRVAQAKAHRFRPSREDFRGRHKRAAAKRAALRFSHSPSPSGSDE-PL--RVRAMKHNPKGSYEDDEEKPTGKTSADRRTPRYEPRTARRRGMGRTGISRSRVTKEKRTGPKGRRRTSRLLAKANDRERFEDEAADDYA---DDVAVDPDEMVQGLAAHGSNVTKVAPEAPISFPNRRSRLAAML 516          
BLAST of Gcaud7666.t1 vs. uniprot
Match: R7QPN4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPN4_CHOCR)

HSP 1 Score: 214 bits (546), Expect = 2.080e-60
Identity = 105/261 (40.23%), Postives = 168/261 (64.37%), Query Frame = 0
Query:    1 MATPIVSDLPFTERIDMREKALAWISRDTGLQEFLIPDELTTEWSAEQKKVWTTTVIDRFMSARQHVGR-EARARVLARENSSWLRRACVRLQQSLADHRDLTRMAVLLETLWNEVSATF-NDSKWAQCSIMFDSALISLRVAYVWLYDKLE--NEDADLQSRQNVFETVVNSFFNSHAPTDDKADKHSANFRALQRVWRTEFENYAN--ADDLDAKLKRLEESQNLMKVATAVNRFLNAVNVDASWMWDMQKLQEDIKAG 255
            M + + S+LPF E + +RE  LAWISRD GL+EFLIPD+L+++W+ EQK+ WT  V++++M      G    R R++A E +S LRR CV L++  A HRD+ + A +LETLW+ +S T  +D+ W +CS+ FD+ALIS+R+AY+W+Y   E   +    ++R+ VF+  V SFF    P D   DKHS NF+ L   WR E ++YA    ++ + ++K++EE  +     T + +F+   +++ SWM  +Q++ ++I+AG
Sbjct:    1 MPSSVPSELPFGELMTLRENVLAWISRDAGLEEFLIPDKLSSKWTKEQKETWTAAVVEKYMHLDDSEGSVNMRKRIVASETASALRRCCVLLREGTASHRDVIKTAAVLETLWDSISPTMGDDAVWVKCSLTFDTALISIRLAYLWIYLNAEANGKSTSFETRKAVFKECVESFFVIGGPADSGKDKHSVNFKELVETWREELKSYAENEEEEFELRVKQVEEGYSREATVTRIEKFMGLADMNGSWMLHVQQMDKEIEAG 261          
The following BLAST results are available for this feature:
BLAST of Gcaud7666.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEX7_9FLOR7.950e-16554.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPN4_CHOCR2.080e-6040.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_273_length_32656_cov_4.516229contigNODE_273_length_32656_cov_4.516229:29727..31271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7666.t1Gcaud7666.t1Gracilaria caudata M_176_S67 malemRNANODE_273_length_32656_cov_4.516229 29727..31271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7666.t1 ID=Gcaud7666.t1|Name=Gcaud7666.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=515bp
MATPIVSDLPFTERIDMREKALAWISRDTGLQEFLIPDELTTEWSAEQKK
VWTTTVIDRFMSARQHVGREARARVLARENSSWLRRACVRLQQSLADHRD
LTRMAVLLETLWNEVSATFNDSKWAQCSIMFDSALISLRVAYVWLYDKLE
NEDADLQSRQNVFETVVNSFFNSHAPTDDKADKHSANFRALQRVWRTEFE
NYANADDLDAKLKRLEESQNLMKVATAVNRFLNAVNVDASWMWDMQKLQE
DIKAGNVKRRKTPKKAREPAPEPPEPESSGSYEPRVEDSDFDIEIAEKRA
SVEDEDDESEGESDELMRGSMSQRKNNGTMVRRSVRVAQAKSVTYRPTRG
EKRGRHRRAAARRAALRFSESPTPSLSDDSPIARRARVTRRAPTRTHEEL
EMDPNEDVANVGRVSKLTARVGVRRAAPRSGISRGRVLKDTRRRRTIRDP
RNSGKDAEDDDNMGDEYKGLGSGFGIGTDELHGGLGGPTIGGSIPGAPVS
FPDRKTRMAALLES*
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