Gcaud7647.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7647.t1
Unique NameGcaud7647.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length214
Homology
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A2V3IUR2_9FLOR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR2_9FLOR)

HSP 1 Score: 397 bits (1019), Expect = 2.560e-139
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0
Query:    1 MHLRGPRPQKKPPAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRSLPKPPKPVL 212
            M LRGPRPQ+KPPAPVP VTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDP+KDITLYINSPGGSV+AGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYL+GATGQDL TIERDTDRDFFM PEEAL YGIIDEVI TKR+LPKPPKPVL
Sbjct:    1 MELRGPRPQRKPPAPVPMVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPSKDITLYINSPGGSVSAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLSGATGQDLATIERDTDRDFFMAPEEALDYGIIDEVIPTKRTLPKPPKPVL 212          
BLAST of Gcaud7647.t1 vs. uniprot
Match: R7QLF4_CHOCR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF4_CHOCR)

HSP 1 Score: 384 bits (985), Expect = 2.950e-133
Identity = 194/209 (92.82%), Postives = 201/209 (96.17%), Query Frame = 0
Query:    4 RGPRPQKKPPAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRSLPKPPKPVL 212
            RGPRPQKKPPAPVP VTFG+NQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSV+AGLAIFDTMQYIPCDVATICFGTAASMGAFLL +G KGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGY+A ATGQDL  IE DTDRDFFMTPEEAL+YGIIDEVIQTKRSLPKP +P+L
Sbjct:   60 RGPRPQKKPPAPVPMVTFGDNQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVSAGLAIFDTMQYIPCDVATICFGTAASMGAFLLGSGTKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYMAYATGQDLNKIEVDTDRDFFMTPEEALEYGIIDEVIQTKRSLPKPARPML 268          
BLAST of Gcaud7647.t1 vs. uniprot
Match: M2VV76_GALSU (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VV76_GALSU)

HSP 1 Score: 333 bits (854), Expect = 5.880e-113
Identity = 164/205 (80.00%), Postives = 186/205 (90.73%), Query Frame = 0
Query:    8 PQKKPPAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRSLPKPPKPVL 212
            P +KPPAP+PTV  G+ QMD+YSRLAKDRILLLGR VDDEVANALVAQMLFL+ +DP+KDITLYINSPGGSV+AGLA++DTMQ+IPCDV+T+CFGTAASM AFLL AG KGKRKSLPN+RIMIHQPLGGAQGQAADIEIQA+EILFI+SLLN Y+A  TG+ L  IE+DTDRDFFMTPEEAL+YG+IDEVIQTK+ L KP KP L
Sbjct:   88 PSRKPPAPIPTVYMGDTQMDIYSRLAKDRILLLGRAVDDEVANALVAQMLFLANEDPSKDITLYINSPGGSVSAGLAVYDTMQFIPCDVSTVCFGTAASMAAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAREILFIKSLLNTYMADYTGKPLEKIEQDTDRDFFMTPEEALEYGMIDEVIQTKKVLAKPQKPAL 292          
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A7S0DXN8_9CRYP (ATP-dependent Clp protease proteolytic subunit n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0DXN8_9CRYP)

HSP 1 Score: 323 bits (829), Expect = 2.090e-109
Identity = 164/212 (77.36%), Postives = 186/212 (87.74%), Query Frame = 0
Query:    6 PRPQKKPPA----PVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRS-LPKPPKPVL 212
            PRP + PPA    P+P V+ GE QMD+YSRLAKDRILLLG  V+DEVAN LVAQMLFL+ +DP KDIT+YINSPGGSV+AG+AI+DTMQYIPCD +T+CFGTAASMGAFLL +GA GKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEILF++SLLN Y+A ATGQ L  IE DTDRDFFMTPEEA +YGIIDEVIQTK+S LPKP +P+L
Sbjct:   64 PRPGEAPPAKPSIPMPMVSVGEGQMDIYSRLAKDRILLLGTDVNDEVANNLVAQMLFLANEDPGKDITIYINSPGGSVSAGMAIYDTMQYIPCDASTVCFGTAASMGAFLLCSGAPGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKSLLNSYMADATGQPLDKIEEDTDRDFFMTPEEAKEYGIIDEVIQTKKSNLPKPSRPIL 275          
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A5J4YL26_PORPP (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL26_PORPP)

HSP 1 Score: 315 bits (806), Expect = 5.000e-106
Identity = 158/193 (81.87%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   11 KPPAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRS 203
            K P P+P V  GE QMDV+SRLAKDRILLLGRQVDDEVANALVAQML+L+ADDP+KDITLYINSPGGSV+AGLAI+DTMQYIPCDV TICFGTAASMGAFLL AGAKGKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEIL+I+ +LN Y++  TG++L  IE+DTDRDFFMTP EA +YGIIDEVI+TK S
Sbjct:   64 KAPFPMPMVAMGEGQMDVFSRLAKDRILLLGRQVDDEVANALVAQMLYLAADDPSKDITLYINSPGGSVSAGLAIYDTMQYIPCDVQTICFGTAASMGAFLLGAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILWIKEVLNMYMSEYTGKELQQIEKDTDRDFFMTPAEAKEYGIIDEVIETKVS 256          
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A835YSZ8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ8_9STRA)

HSP 1 Score: 313 bits (801), Expect = 6.060e-105
Identity = 156/208 (75.00%), Postives = 181/208 (87.02%), Query Frame = 0
Query:    7 RPQKKPPAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRS-LPKPPKPVLQ 213
            +P + PP  +P V  G  QMDV SRL KDRILLLG+QV+DEVAN LVAQ+L+L+++DP+KDITLYINSPGGSV+AG+AI+DTMQY+PCDV+T+CFGTAASMGAFLL AGAKGKR+SLPN+RIMIHQPLGGAQGQAADIEIQAKEILFIRSLLN Y+A  TGQ +  I+ D DRDFFMTPEEA +YGIIDEVI TK S +PKPP P L+
Sbjct:   80 KPSEIPPVRMPVVDVGGGQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLASEDPSKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYIADYTGQPIEKIQEDCDRDFFMTPEEAAEYGIIDEVITTKTSSIPKPPMPSLE 287          
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A2V3J5N2_9FLOR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N2_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 1.800e-103
Identity = 155/201 (77.11%), Postives = 177/201 (88.06%), Query Frame = 0
Query:   13 PAPVPTVTFGEN-QMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRSLPKPPKPVL 212
            P PVP V  G+N QMD+YSRLAKDRILLLGR VDDEVAN+LVAQMLFL+++DP KDIT+YINSPGGSV+AGLAI+DTMQ+IPCDV TICFGTAASMGAFLL AG KGKRKSLPN+RIMIHQPLGGAQGQAADIEIQAKEILF+++LLNGY++  TGQ L  IE DTDRDFFMT  +A++YGIIDEVI+TK  +P   +P L
Sbjct:   65 PPPVPMVAVGDNSQMDIYSRLAKDRILLLGRAVDDEVANSLVAQMLFLASEDPEKDITIYINSPGGSVSAGLAIYDTMQFIPCDVQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVKALLNGYMSDFTGQPLDKIETDTDRDFFMTAIDAMEYGIIDEVIKTKVDVPVLKRPTL 265          
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A1X6P0G7_PORUM (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0G7_PORUM)

HSP 1 Score: 307 bits (787), Expect = 3.870e-103
Identity = 149/203 (73.40%), Postives = 176/203 (86.70%), Query Frame = 0
Query:    5 GPRPQKKPPAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRSLPKP 207
            G  P++  P P+P V  G+ QMD+YSRLAKDRIL+LG  VDD VAN LVAQMLFL+++DP KDITL+INSPGGS++AGLAIFDTMQ++PCD+ TICFGTAASMGAFLL AG KGKRKSLPN+RIMIHQPLGGAQGQAADIEIQA EILF+R LLN Y+AG TG  +  IE+DTDRD+FMTPE+A++YG+ID+VI+TK  LPKP
Sbjct:   60 GTEPKRSAPPPMPMVAVGDGQMDIYSRLAKDRILVLGAAVDDTVANQLVAQMLFLASEDPDKDITLWINSPGGSISAGLAIFDTMQFVPCDIQTICFGTAASMGAFLLGAGTKGKRKSLPNARIMIHQPLGGAQGQAADIEIQAGEILFMRGLLNSYMAGYTGVAVEKIEKDTDRDYFMTPEDAVEYGLIDDVIKTKVMLPKP 262          
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A7S1TTI2_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTI2_9STRA)

HSP 1 Score: 305 bits (780), Expect = 1.150e-101
Identity = 152/213 (71.36%), Postives = 180/213 (84.51%), Query Frame = 0
Query:    4 RGPRPQKKPPAPV--PTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRS-LPKPPKPVLQ 213
            R P P +K   PV  P V  G+ QMDV SRL KDR+LLLG+QV+D+VAN LVAQ+L+L+++DP KDITLYINSPGGSV+AG+AIFDTMQY+PCDV+T+CFG AASMGAFLL AGAKGKR++LPNSRIMIHQPLGGAQGQAAD+EIQAKEIL+IR +LN Y+A  TGQ    IE D DRDFF++PEEA +YG+IDEV+ TK S LPKPP PVL+
Sbjct:   79 RRPDPDRKTNIPVRMPVVDVGDGQMDVVSRLLKDRVLLLGQQVNDDVANVLVAQLLYLASEDPDKDITLYINSPGGSVSAGMAIFDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADVEIQAKEILYIREILNSYMAAFTGQPSSKIETDCDRDFFLSPEEACEYGLIDEVVTTKTSHLPKPPMPVLE 291          
BLAST of Gcaud7647.t1 vs. uniprot
Match: A0A8J5XGM1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XGM1_DIALT)

HSP 1 Score: 300 bits (769), Expect = 2.180e-100
Identity = 148/200 (74.00%), Postives = 170/200 (85.00%), Query Frame = 0
Query:   13 PAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVANALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATICFGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQTKRSLPKPPKPVL 212
            P  +PTV FG+ QMDV SRL  DRILLLG QVDDE  N LVAQ+L+L+ +D +KD TLYINSPGGSV+AG+AIFDTMQY+PCDV+T+CFGTAASMGAFLL +G  GKR+SLPNSRIMIHQPLGGAQGQAADIEIQAKEILF+R++LN Y+A  TGQ +  IE D DRDFFMTPEEA  YGIIDEVI+TKR + KPP+P L
Sbjct:   68 PVQLPTVGFGDKQMDVVSRLLSDRILLLGSQVDDERGNVLVAQLLYLAGEDASKDCTLYINSPGGSVSAGMAIFDTMQYVPCDVSTVCFGTAASMGAFLLGSGTMGKRRSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFVRAVLNQYIADFTGQPVDKIEEDCDRDFFMTPEEAKDYGIIDEVIKTKRMMVKPPRPEL 267          
The following BLAST results are available for this feature:
BLAST of Gcaud7647.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUR2_9FLOR2.560e-13994.34ATP-dependent Clp protease proteolytic subunit n=1... [more]
R7QLF4_CHOCR2.950e-13392.82ATP-dependent Clp protease proteolytic subunit n=1... [more]
M2VV76_GALSU5.880e-11380.00ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S0DXN8_9CRYP2.090e-10977.36ATP-dependent Clp protease proteolytic subunit n=3... [more]
A0A5J4YL26_PORPP5.000e-10681.87ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A835YSZ8_9STRA6.060e-10575.00ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2V3J5N2_9FLOR1.800e-10377.11ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A1X6P0G7_PORUM3.870e-10373.40ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S1TTI2_9STRA1.150e-10171.36ATP-dependent Clp protease proteolytic subunit n=2... [more]
A0A8J5XGM1_DIALT2.180e-10074.00Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 119..138
score: 63.38
coord: 67..87
score: 65.83
coord: 27..42
score: 47.97
coord: 98..115
score: 67.36
coord: 176..195
score: 55.5
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 15..201
score: 40.52013
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 27..197
e-value: 1.45641E-109
score: 309.372
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 23..200
e-value: 1.1E-78
score: 263.3
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 22..204
NoneNo IPR availableGENE3D3.90.226.10coord: 6..203
e-value: 2.7E-78
score: 264.3
NoneNo IPR availablePANTHERPTHR10381:SF24ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTICcoord: 22..204
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 120..133
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 98..109
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 21..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1172_length_13070_cov_4.028739contigNODE_1172_length_13070_cov_4.028739:3010..3651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7647.t1Gcaud7647.t1Gracilaria caudata M_176_S67 malemRNANODE_1172_length_13070_cov_4.028739 3010..3651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7647.t1 ID=Gcaud7647.t1|Name=Gcaud7647.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=214bp
MHLRGPRPQKKPPAPVPTVTFGENQMDVYSRLAKDRILLLGRQVDDEVAN
ALVAQMLFLSADDPTKDITLYINSPGGSVNAGLAIFDTMQYIPCDVATIC
FGTAASMGAFLLSAGAKGKRKSLPNSRIMIHQPLGGAQGQAADIEIQAKE
ILFIRSLLNGYLAGATGQDLGTIERDTDRDFFMTPEEALQYGIIDEVIQT
KRSLPKPPKPVLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR033135ClpP_His_AS
IPR018215ClpP_Ser_AS
IPR029045ClpP/crotonase-like_dom_sf