Gcaud7636.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7636.t1
Unique NameGcaud7636.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length292
Homology
BLAST of Gcaud7636.t1 vs. uniprot
Match: K0T3C4_THAOC (DDE Tnp4 domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T3C4_THAOC)

HSP 1 Score: 120 bits (302), Expect = 1.680e-27
Identity = 86/287 (29.97%), Postives = 141/287 (49.13%), Query Frame = 0
Query:   35 RVERERRCLAQVNQKLSDSEFRSCYRLCRHTFFLLLAQLRLFLSQYNEEEYKAEI--------------------QAH--LSGSAIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLT--ICDSYLTFEGLPPKADIAAYKR-TAIDFAISRRNLNLLPGCVGALDGTLIFLQKPSKE--LSN-QQFYTRKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEG---LPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            R+ R+R+  +  + KL+D +FR  +R+ R  F+LL  ++        E+ +K+E+                    +AH   +G  I    KL + LR +AG SY DL L ++   ST Y IF +V+   IC        +  K  I   +R  A+    +R +  L  GC+GA+DG ++ ++KPS+   + N   FY+RKG +G+ V  + D K R +       G+  D+ AF +S++ R L ++    L +GF   GD AY    F++TP   ++    +D FNF
Sbjct:   71 RIFRQRKRWSDFSAKLTDRQFRRYFRMSRECFYLLCRRIE---ENVGEKAFKSEVFLDNLKYTRDPNLVRMSKLMRAHENTTGGFISGEIKLALTLRLLAGGSYLDLSLLFECGSSTAYEIFHKVIREWICSKDKPLVNINGKDFIDDEERMAAVALEFARSSAGLFSGCIGAIDGWVVKIKKPSQRDNVGNVASFYSRKGFYGLNVVVICDRKKRILYRVINSRGAEHDSTAFKNSSLYRKLMDDCDRLLEKGFHFIGDSAYAIRSFLLTPFDNAVHGTPEDNFNF 354          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A8J6CFP3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFP3_DIALT)

HSP 1 Score: 122 bits (305), Expect = 2.130e-27
Identity = 84/279 (30.11%), Postives = 148/279 (53.05%), Query Frame = 0
Query:   15 LLAICGALTALMATTRSPPT-RVE-RERRCLAQVNQKLSDSEFRSCYRLCRHTFFLLLAQLRLFLSQYNEEEYKAEIQAHLSGSAIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTICDSYLTFEGLPPKADIAAYKRTAIDFAISRRNLNLLPGCVGALDGTLIFLQKPSKELSNQQ-FYTRKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            +++I     A     R  PT R+  R+R  + +   +L + EF+  +R+ R TF ++L ++       +  E +   +AH  G A+     L   LRF+AG  + D+   ++I RS+ Y    +V+   ++  TF+  P   ++A  +  + ++A  + +   + G VGA+DG  + +++PS ++ N   ++ R+G + + VQA+ DA+ RFI  SA   GS  D+VA+A S+ G+FL   GLP G+ I GD AY  +  ++TP P       +D FN+
Sbjct:   17 IISIVATRNARKLEWRERPTGRIHSRDRLHVLRKLDELPEKEFKRIFRVERATFDVILKKIS------HRIERRMPSRAHARGPALPPVLMLACALRFLAGGLHCDICFKWEISRSSLYRAVDDVVDAINAEFTFDFHP--GNLAQVQLLSNEWAHLKGSY--VRGIVGAVDGIAVKIRRPSGDVLNPAAYFNRQGFYALAVQAVCDARRRFIFVSANSEGSIPDSVAWACSSFGKFLSSTGLPPGYCIVGDAAYPLSSSLLTPYPGDTLPSDKDAFNY 285          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A8J5XFK9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFK9_DIALT)

HSP 1 Score: 114 bits (284), Expect = 3.380e-25
Identity = 83/268 (30.97%), Postives = 126/268 (47.01%), Query Frame = 0
Query:   49 KLSDSEFRSCYRLCRHTFFLLLAQLRLFLSQYNEEEYKAEIQAHLSGSAIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTICDSYLTFEGLPP-KADIAAYKRT------------------------AIDFAISRRNLNLLPGCVGALDGTLIFLQKPSKELSNQ-QFYTRKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            +L + EF+  +RL R TF  +L ++   L      E +   +AH  G A+     L   LRF+AG SY D+   +++ R    AI  E     D     + +    A  AA  R+                         + F   R     + G +GA+DG  I ++ P  E+ N   +Y RKG + + V+A+ DA+ RFI   A   GST D+VA+  S++G +L   GLP GF+IAGD AY C+  ++TP P +     +D FN+
Sbjct:   49 ELPEKEFKRMFRLDRATFNAVLKKISPGL------ERRMPSKAHARGRALPPKLMLACALRFLAGGSYLDICFGFEMSRKVVDAINAEYKFNFDPKEVVDAINAINARFAAQARSQXXXXXXXXXXXXXXXXXDEATLRTLSFDWQRYKGTYIKGIIGAVDGIAIKIRCPGGEVLNPGAYYNRKGFYALVVRAVCDARRRFIYVHANSEGSTPDSVAWGCSSLGDYLSSNGLPSGFFIAGDAAYSCSDALLTPYPGNNLPADKDAFNY 310          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A7S3NJR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJR1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.400e-19
Identity = 69/224 (30.80%), Postives = 113/224 (50.45%), Query Frame = 0
Query:   55 FRSCYRLCRHTFFLLLAQLRLFLSQYNEEEYKAEIQAHLSGSAIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTICDSYLTFEGLPPKADIAAYKRTAIDFAI-SRRNLNLLPGCVGALDGTLIFLQKPSKELSNQQFY--TRKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTP 275
            F+  YR+ +  F LLL+ +R  ++  N E  +       SGS +    +L + LR++AG S WD+ L + I  +  Y+    V+   ++Y  F+ + P  D    K T I+    S+ +  ++ GCVGA+DG LI+   P   + N   Y   RK    + + A+VDA  RF+     C  ST D++A+  + + +      L E F+I GD A+ CT  ++TP
Sbjct:   73 FKKMYRIDKDNFKLLLSYIRDKITTVNVEMARLS-----SGSEVCPEVRLAMTLRYLAGGSVWDIKLLFNISVNEFYSSVWRVVEAINNYEGFKVVFPIDD--EEKLTEIEGVFRSKSSHGMITGCVGAIDGCLIWQMNPGIAVHNPNRYYCARKEKCALLLMAIVDADRRFLFYDISCTPSTHDSLAWDSTRLAQRFAAGDLCERFFIFGDNAFVCTRSMITP 289          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A7S3NJY3_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJY3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.630e-19
Identity = 69/235 (29.36%), Postives = 114/235 (48.51%), Query Frame = 0
Query:   43 LAQVNQKLSDSEFRSCYRLCRHTFFLLLAQLRLFLSQYNEEEYKAEIQAHLSGSAIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTICDSYLTFEGLPPKADIAAYKRTAIDFAISRRNLNLLPGCVGALDGTLIFLQKPSKELSNQQFY--TRKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTP 275
            +AQV +++    F+  YRL    F  LL  +R  ++  N      E+    SGS + A  +L + LR++AG S WD+ L + +     Y     V+   ++Y  F+ + P  D+         F  S+ +  ++ GCVGA+DG L++ + P   + N   Y   RK    + + A+VDA  R I     C  ST D++A+  + + +      L E F+I GD A+ CT  ++TP
Sbjct:   69 VAQVGRRV----FKKMYRLDLENFNRLLGYIRDEITTEN-----VEMARRSSGSEVCAEVRLAMTLRYLAGGSMWDIRLIFDVSHDEFYRSVWRVVDAINNYEGFKVVFPIDDVEKLSEIESVFR-SKSSHEMITGCVGAIDGCLLWQKNPGIAVHNPNRYYCARKEKHALLLMAIVDADRRIIFYDISCTPSTHDSLAWDSTPLAQRFAAGDLCERFFIFGDSAFVCTRSMITP 293          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A6H5K9T7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T7_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.240e-18
Identity = 70/206 (33.98%), Postives = 100/206 (48.54%), Query Frame = 0
Query:   97 AIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTIC---------DSYLTFEGLPPKADIAAYKRTAIDFAISRRNLNLLPGCVGALDGTLIFLQKP-SKELSNQQFYT--RKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            AI    ++ + LR +AGASYWD+ L + +   T Y I   V+            D  LT EG    A+I  +K  + D         +    V A+DG  I  + P +K+ +N   Y   RK  +G+ VQA+  A YRF A SA+  GST D VA+  S++ + +    LP GF I GD AY     ++TP P  +    +D FNF
Sbjct:   10 AIAVEVRVAVALRILAGASYWDVALMFGLSVPTTYQILWSVIDAINKTPAVGAFDFPLTEEGCVRNANI--FKEKSTD--------GIFSWVVAAVDGLFIKAKAPCAKDTANVIAYYSGRKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVAR--LPAGFHIIGDAAYPIGEKLLTPSPGRLLPPGEDSFNF 203          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A6H5JEM6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM6_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.560e-18
Identity = 68/206 (33.01%), Postives = 98/206 (47.57%), Query Frame = 0
Query:   97 AIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTIC---------DSYLTFEGLPPKADIAAYKRTAIDFAISRRNLNLLPGCVGALDGTLIFLQKP-SKELSNQQFYT--RKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            AI    ++ + LR +AGASYWD+++ + +  +  Y I  EV+            D  LT EG    A+   +K  + D         +    V A+DG  I  + P +KE  N   Y    K  +G+ VQA+  A YRF A SA+  GST D VA+  S++ + +    LP GF I GD AY     ++TP P       +D FNF
Sbjct:   33 AISVEVRVAVALRILAGASYWDVLVMFGLSVAVTYQILWEVIDAINNTPAVGAFDFPLTEEGCMRNAN--RFKDKSTD--------GIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYPGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWTRSSLAKAVAR--LPAGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNF 226          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.040e-17
Identity = 80/257 (31.13%), Postives = 125/257 (48.64%), Query Frame = 0
Query:   47 NQKLSDSEFRSC----YRLCRHTFFLLLAQLRLFLSQYNEEEYKAEIQAHLSGSAIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTICDSYLTFEGLPPKADIAAYKRTAIDFA-----ISRRNLN-LLPGCVGALDGTLIFLQKPS-KELSNQQFYT--RKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            ++   D E R C    YR+ RH F   LA+L   L   N+  + AE++  L+G AI    +L + LR +AGASY D+ + + +   T YA    V+   +S        P+     + +T  D         R++ N +   CV  +DG  +    PS K+ +N   Y   +K  +G+ VQA+  A YRF + SA+  G+T D  A+  S + R +    LP+GF++ GD AY  +  ++TP P       +D FNF
Sbjct:   71 DEHADDLEERDCFKRMYRMPRHAF-EKLAELLAPLLTVNK--HFAELRT-LNG-AISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINS-------TPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNR--LPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNF 313          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A6H5L3C4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C4_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.200e-16
Identity = 68/206 (33.01%), Postives = 98/206 (47.57%), Query Frame = 0
Query:   97 AIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTIC---------DSYLTFEGLPPKADIAAYKRTAIDFAISRRNLNLLPGCVGALDGTLIFLQKP-SKELSNQQFYTR--KGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            AI    ++ + LR +AGASYWD+ L + +   T Y I   V+            D  LT EG    A+   +K  + D         +    V A+DG  I  + P +K+ +N   Y    K  +G+ VQA+  A YRF A SA+  GST D VA+  S++ + +    LP GF I GD AY     ++TP P  +    +D FNF
Sbjct:  170 AIAVEVRVAVALRILAGASYWDVALMFGLSVPTTYQILWSVIDAINKTRAVGAFDFPLTEEGCMRNAN--RFKEKSTD--------GIFSWVVAAVDGLFIKAKAPCAKDTANVIAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVAR--LPAGFHIIGDAAYPIGEKLLTPYPGRLLPPGEDSFNF 363          
BLAST of Gcaud7636.t1 vs. uniprot
Match: A0A6H5JD50_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD50_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.580e-16
Identity = 66/209 (31.58%), Postives = 99/209 (47.37%), Query Frame = 0
Query:   94 SGSAIEAATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTIC---------DSYLTFEGLPPKADIAAYKRTAIDFAISRRNLNLLPGCVGALDGTLIFLQKP-SKELSNQQFYTR--KGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQEEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNF 290
            +  AI    ++   LR +AG SYWD+ L + + R+  + I  +V+            D  LT EG    A+   +K  + D         +    V A+DG  I  + P +K+ +N   Y    K  +G+ VQA+  A YRF A SA+  GST D VA+  S++ + +    LP GF I GD AY     ++TP P  +    +D FNF
Sbjct:  127 TNGAIAVEVRVAAALRILAGGSYWDVALMFGLSRAVTFDILWQVIDAINETPAIGAFDFPLTEEGCMRNAN--RFKEKSTD--------GIFSWVVAAVDGLFIKAKAPYAKDTANVLAYYSGSKSAYGINVQAMCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVAR--LPTGFHIIGDAAYPIGEKLLTPYPGRLLPAGEDSFNF 323          
The following BLAST results are available for this feature:
BLAST of Gcaud7636.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K0T3C4_THAOC1.680e-2729.97DDE Tnp4 domain-containing protein n=2 Tax=Thalass... [more]
A0A8J6CFP3_DIALT2.130e-2730.11Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A8J5XFK9_DIALT3.380e-2530.97Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S3NJR1_9STRA1.400e-1930.80Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3NJY3_9STRA3.630e-1929.36Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A6H5K9T7_9PHAE1.240e-1833.98DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JEM6_9PHAE2.560e-1833.01DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5L386_9PHAE1.040e-1731.13DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5L3C4_9PHAE1.200e-1633.01DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JD50_9PHAE2.580e-1631.58DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 183..284
e-value: 4.3E-16
score: 59.0
IPR045249Putative nuclease HARBI1-likePANTHERPTHR22930UNCHARACTERIZEDcoord: 94..290
NoneNo IPR availablePANTHERPTHR22930:SF207SIMILAR TO ENSANGP00000010363coord: 94..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_240_length_34680_cov_4.545549contigNODE_240_length_34680_cov_4.545549:280..1154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7636.t1Gcaud7636.t1Gracilaria caudata M_176_S67 malemRNANODE_240_length_34680_cov_4.545549 280..1154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7636.t1 ID=Gcaud7636.t1|Name=Gcaud7636.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=292bp
MTRIQKRTRKLTNRLLAICGALTALMATTRSPPTRVERERRCLAQVNQKL
SDSEFRSCYRLCRHTFFLLLAQLRLFLSQYNEEEYKAEIQAHLSGSAIEA
ATKLGIFLRFMAGASYWDLMLTYKIRRSTCYAIFREVLTICDSYLTFEGL
PPKADIAAYKRTAIDFAISRRNLNLLPGCVGALDGTLIFLQKPSKELSNQ
QFYTRKGGFGVPVQALVDAKYRFIASSAVCVGSTVDAVAFAHSNIGRFLQ
EEGLPEGFWIAGDEAYRCTMFIVTPIPRSMAHRYQDGFNFCX
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom
IPR045249HARBI1-like