Gcaud7622.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7622.t1
Unique NameGcaud7622.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length162
Homology
BLAST of Gcaud7622.t1 vs. uniprot
Match: R7QEH1_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEH1_CHOCR)

HSP 1 Score: 273 bits (698), Expect = 4.190e-92
Identity = 125/150 (83.33%), Postives = 139/150 (92.67%), Query Frame = 0
Query:    1 MAQRLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            MAQRLLKEHRDLQKEAKK++P+I+L+PVD NL++W G++ GPEGTPYEGG+F LEV VPSSYPLT PNFR  T IFHPNVHPKTGEIC+DILKNAWSPAWTLQSTCRAII+LLSHPEPDSPLNCDAGNLLR GD+RGFRSVA MYTA+HA
Sbjct:    1 MAQRLLKEHRDLQKEAKKSNPDILLSPVDSNLFRWAGSVAGPEGTPYEGGRFSLEVKVPSSYPLTAPNFRLLTKIFHPNVHPKTGEICIDILKNAWSPAWTLQSTCRAIIILLSHPEPDSPLNCDAGNLLRQGDHRGFRSVATMYTAIHA 150          
BLAST of Gcaud7622.t1 vs. uniprot
Match: A0A5J4Z010_PORPP (Protein PEROXIN-4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z010_PORPP)

HSP 1 Score: 232 bits (592), Expect = 5.010e-76
Identity = 108/151 (71.52%), Postives = 126/151 (83.44%), Query Frame = 0
Query:    1 MAQRLLKEHRDLQKEAKK-ADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            M+ RL+KE+R+LQKEA + +DP+IVL P + N   W G I GP GTP+E G F L++++PSSYP++PPN RFAT IFHPNVH KTGEICLDILK AWSPAWTLQSTCRAIIVLLSHPE DSPLNCDAGNL+R GD RGF SVA+MYT L+A
Sbjct:    2 MSGRLMKEYRELQKEASQCSDPDIVLTPSENNFTSWRGRIKGPAGTPFENGHFMLDIMIPSSYPMSPPNIRFATKIFHPNVHAKTGEICLDILKTAWSPAWTLQSTCRAIIVLLSHPEADSPLNCDAGNLIRAGDARGFGSVARMYTMLYA 152          
BLAST of Gcaud7622.t1 vs. uniprot
Match: A0A1X6PE96_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PE96_PORUM)

HSP 1 Score: 227 bits (578), Expect = 1.010e-73
Identity = 106/149 (71.14%), Postives = 122/149 (81.88%), Query Frame = 0
Query:    4 RLLKEHRDLQKEAKKA--DPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            RLLKEHR++QK+A+ A  D EIVLAP DGNL  W G + GP  TPYE G F+++V+VPSSYPL+PPN R  + +FHPNVHPKTGE+CLDILK AWSPAWTL ST RA+IVLL HPEPDSPLNCDAGNLLR GD R FRS+A+MYT L A
Sbjct:    6 RLLKEHREMQKDARVAGVDAEIVLAPEDGNLSHWVGHVRGPVETPYENGYFKIDVVVPSSYPLSPPNVRLISKVFHPNVHPKTGEVCLDILKTAWSPAWTLASTARALIVLLGHPEPDSPLNCDAGNLLRAGDGRAFRSLARMYTKLCA 154          
BLAST of Gcaud7622.t1 vs. uniprot
Match: M2XTF8_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XTF8_GALSU)

HSP 1 Score: 214 bits (544), Expect = 1.020e-68
Identity = 101/149 (67.79%), Postives = 115/149 (77.18%), Query Frame = 0
Query:    2 AQRLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            ++RL KE  +L+K AKK DP+I L P D NL  W   + GP  +PYEGG F LE+ +P++YPL+ P  R  T IFHPN+H KTGEICLDILK  WSPAWTLQS CRAI+VLLSHPEPDSPLNCDAGNLLR GD RGFRSVAKMYT L A
Sbjct:    4 SRRLYKEWEELEK-AKKQDPDIFLYPTDDNLLHWQAKLKGPVDSPYEGGTFVLEIRIPNNYPLSAPTVRLKTKIFHPNIHAKTGEICLDILKTTWSPAWTLQSVCRAILVLLSHPEPDSPLNCDAGNLLRAGDLRGFRSVAKMYTVLFA 151          
BLAST of Gcaud7622.t1 vs. uniprot
Match: A0A0J8B9H0_BETVV (UBC core domain-containing protein n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0J8B9H0_BETVV)

HSP 1 Score: 213 bits (541), Expect = 3.230e-68
Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = 0
Query:    4 RLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            RL KE++++Q+E K ADP+I LA  D N+++W   I GP  TPYEGG F+L   VP  YPL PP  RF T IFHPNVH KTGEICLDILKNAWSPAWTLQS CRAII L++HPEPDSPLNCD+GNLLR GD RGF S+A+MYT L A
Sbjct:    7 RLFKEYKEVQRE-KSADPDIQLACDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFHSMARMYTRLAA 152          
BLAST of Gcaud7622.t1 vs. uniprot
Match: K3YWB5_SETIT (UBC core domain-containing protein n=121 Tax=Mesangiospermae TaxID=1437183 RepID=K3YWB5_SETIT)

HSP 1 Score: 212 bits (539), Expect = 6.510e-68
Identity = 99/147 (67.35%), Postives = 115/147 (78.23%), Query Frame = 0
Query:    4 RLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            RL KE++++Q+E K ADP+I L   D N+++W   I GP  TPYEGG F+L   +P  YPL PP  RF T IFHPNVH KTGEICLDILKNAWSPAWTLQS CRAII L++HPEPDSPLNCD+GNLLR GD RGF+S+AKMYT L A
Sbjct:    7 RLFKEYKEVQRE-KSADPDIQLICDDSNIFKWTALIKGPSETPYEGGVFQLAFAIPEQYPLLPPQVRFLTRIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMAKMYTKLAA 152          
BLAST of Gcaud7622.t1 vs. uniprot
Match: B9T5D3_RICCO (Ubiquitin-conjugating enzyme E2, putative n=3 Tax=Pentapetalae TaxID=1437201 RepID=B9T5D3_RICCO)

HSP 1 Score: 211 bits (537), Expect = 1.310e-67
Identity = 99/147 (67.35%), Postives = 116/147 (78.91%), Query Frame = 0
Query:    4 RLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            RL KE++++Q+E K ADP+I L   D N+++W+  I GP  TPYEGG F+L   VP  YPL PP  RF T IFHPNVH KTGEICLDILKNAWSPAWTLQS CRAII L++HPEPDSPLNCD+GNLLR GD RGF+S+A+MYT L A
Sbjct:    7 RLFKEYKEVQRE-KTADPDIQLVCDDSNIFKWNALIKGPTETPYEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMARMYTRLAA 152          
BLAST of Gcaud7622.t1 vs. uniprot
Match: UPI00054031BF (protein PEROXIN-4 isoform X1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00054031BF)

HSP 1 Score: 213 bits (541), Expect = 1.410e-67
Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = 0
Query:    4 RLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            RL KE++++Q+E K ADP+I LA  D N+++W   I GP  TPYEGG F+L   VP  YPL PP  RF T IFHPNVH KTGEICLDILKNAWSPAWTLQS CRAII L++HPEPDSPLNCD+GNLLR GD RGF S+A+MYT L A
Sbjct:   52 RLFKEYKEVQRE-KSADPDIQLACDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFHSMARMYTRLAA 197          
BLAST of Gcaud7622.t1 vs. uniprot
Match: A0A0K9QEV3_SPIOL (UBC core domain-containing protein n=6 Tax=Pentapetalae TaxID=1437201 RepID=A0A0K9QEV3_SPIOL)

HSP 1 Score: 211 bits (536), Expect = 1.860e-67
Identity = 99/147 (67.35%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    4 RLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            RL KE++++Q+E K ADP+I L   D N+++W   I GP  TPY+GG F+L   VP  YPL PP  RF T IFHPNVH KTGEICLDILKNAWSPAWTLQS CRAII L++HPEPDSPLNCD+GNLLR GD RGF S+AKMYT L A
Sbjct:    7 RLFKEYKEVQRE-KTADPDITLVCDDTNIFKWTALIKGPSETPYDGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAKMYTRLAA 152          
BLAST of Gcaud7622.t1 vs. uniprot
Match: A0A1Z5R2J0_SORBI (UBC core domain-containing protein n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5R2J0_SORBI)

HSP 1 Score: 212 bits (539), Expect = 2.740e-67
Identity = 99/147 (67.35%), Postives = 115/147 (78.23%), Query Frame = 0
Query:    4 RLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGGKFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAWTLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA 150
            RL KE++++Q+E K ADP+I L   D N+++W   I GP  TPYEGG F+L   +P  YPL PP  RF T IFHPNVH KTGEICLDILKNAWSPAWTLQS CRAII L++HPEPDSPLNCD+GNLLR GD RGF+S+AKMYT L A
Sbjct:   51 RLFKEYKEVQRE-KSADPDIQLICDDSNIFKWTALIKGPSETPYEGGVFQLAFAIPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDIRGFQSMAKMYTKLAA 196          
The following BLAST results are available for this feature:
BLAST of Gcaud7622.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QEH1_CHOCR4.190e-9283.33UBC core domain-containing protein n=1 Tax=Chondru... [more]
A0A5J4Z010_PORPP5.010e-7671.52Protein PEROXIN-4 n=1 Tax=Porphyridium purpureum T... [more]
A0A1X6PE96_PORUM1.010e-7371.14UBC core domain-containing protein n=1 Tax=Porphyr... [more]
M2XTF8_GALSU1.020e-6867.79Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A0J8B9H0_BETVV3.230e-6868.03UBC core domain-containing protein n=4 Tax=Mesangi... [more]
K3YWB5_SETIT6.510e-6867.35UBC core domain-containing protein n=121 Tax=Mesan... [more]
B9T5D3_RICCO1.310e-6767.35Ubiquitin-conjugating enzyme E2, putative n=3 Tax=... [more]
UPI00054031BF1.410e-6768.03protein PEROXIN-4 isoform X1 n=1 Tax=Beta vulgaris... [more]
A0A0K9QEV3_SPIOL1.860e-6767.35UBC core domain-containing protein n=6 Tax=Pentape... [more]
A0A1Z5R2J0_SORBI2.740e-6767.35UBC core domain-containing protein n=2 Tax=Sorghum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 3..151
e-value: 2.8E-50
score: 183.0
NoneNo IPR availablePANTHERPTHR24068:SF383BNAA09G04490D PROTEINcoord: 3..151
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..151
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..152
e-value: 3.7E-50
score: 171.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..151
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 10..145
e-value: 1.0E-42
score: 145.1
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..151
score: 49.372387
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 3..146
e-value: 3.47415E-55
score: 168.535
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 76..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_534_length_22701_cov_4.725210contigNODE_534_length_22701_cov_4.725210:1645..2130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7622.t1Gcaud7622.t1Gracilaria caudata M_176_S67 malemRNANODE_534_length_22701_cov_4.725210 1645..2130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7622.t1 ID=Gcaud7622.t1|Name=Gcaud7622.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=162bp
MAQRLLKEHRDLQKEAKKADPEIVLAPVDGNLYQWDGTINGPEGTPYEGG
KFRLEVIVPSSYPLTPPNFRFATTIFHPNVHPKTGEICLDILKNAWSPAW
TLQSTCRAIIVLLSHPEPDSPLNCDAGNLLRYGDNRGFRSVAKMYTALHA
CSHNDSSSSSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS