Gcaud7615.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7615.t1
Unique NameGcaud7615.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length177
Homology
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BLAST of Gcaud7615.t1 vs. uniprot
Match: A0A2V3J6F5_9FLOR (Chromatin structure-remodeling complex subunit snf21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F5_9FLOR)

HSP 1 Score: 80.1 bits (196), Expect = 2.900e-14
Identity = 55/124 (44.35%), Postives = 66/124 (53.23%), Query Frame = 0 
Query:   14 NNGPPRMGYPPFPLGFPNAQ---GGMNGPPPIHRPSVGHFPKQDAGAMQMSRHRHEVPRSGPPRPGPSQGPQRNQIANKHANSRYTRGFGPWGDSVGTRYDSTPTKPRAEVKSGRANVQSVEKN 134
            N+ P RMG+   P GFPN     GG++GPPPIHRPS+GHF   +     M R R      G  RPGP+QGPQR Q A +H  S Y  GFG  G+  G  + +   K     K GRA  Q  E N
Sbjct: 1814 NSHPGRMGFQ-VPPGFPNMNHPPGGLSGPPPIHRPSIGHFAMSEPPIHSMPRQR-----PGLHRPGPAQGPQRTQNA-RHGYSGYIGGFGT-GEDGGPGFRAFDKKQHMSTKPGRAEPQEDEHN 1929
The following BLAST results are available for this feature:
BLAST of Gcaud7615.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6F5_9FLOR2.900e-1444.35Chromatin structure-remodeling complex subunit snf... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1157_length_13190_cov_4.178105contigNODE_1157_length_13190_cov_4.178105:12500..13030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7615.t1Gcaud7615.t1Gracilaria caudata M_176_S67 malemRNANODE_1157_length_13190_cov_4.178105 12500..13030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7615.t1 ID=Gcaud7615.t1|Name=Gcaud7615.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=177bp
MNASDERDLGDDNNNGPPRMGYPPFPLGFPNAQGGMNGPPPIHRPSVGHF
PKQDAGAMQMSRHRHEVPRSGPPRPGPSQGPQRNQIANKHANSRYTRGFG
PWGDSVGTRYDSTPTKPRAEVKSGRANVQSVEKNVGNDEAKQTSTGASAQ
NSDRGQAGLASEGSKEGKEDGKEVDS*
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