Gcaud7604.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7604.t1
Unique NameGcaud7604.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length415
Homology
BLAST of Gcaud7604.t1 vs. uniprot
Match: A0A2V3J4K6_9FLOR (FHA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4K6_9FLOR)

HSP 1 Score: 230 bits (586), Expect = 1.410e-67
Identity = 141/295 (47.80%), Postives = 170/295 (57.63%), Query Frame = 0
Query:    2 SVLPTQMGLPVCLVPSKLKYKPNNDALAEPSKIHGFQEIRHRTKETVGWIKFMHPIPFLLFGRDLGASHVFVGHPTVSPQHAVAFWDRVSGLCMIQDLESEHGTFLNDNTVSHLEPAFIKPKDVIRFGTSAHHFIFDYLPLEYRDE----EPPSAQPPSMDARTEASNLPXXXXXXXRRLSNDSPSQRAS-----GAFSRSPPRSDAMDRPSARAFRMMGPPRRSTPLGGPRVPASEPDFMRPDEPDYDRERAMDNRWNDRPIAAGEPMDDGRRRMPPPNSGRYPSRRGRNSPPP 287
            + +P QMGLP CLVPS  K K N ++  +PS+IHGF E+R ++KET+GWIKF+  +PFL+FGRDLGA HVFVGHP+V+ QHA A+WD  SG CMIQD+ESEHGT +N  T+SH++P  ++ KD IRFG SAH +IFDYLP EYRD      PP    P  DARTEAS          RR+S DSP + +        F RSP R      PS+  F    PPR   PL  P  P             +   R     W D     G PMDDG  R P P  G  P   GR  PPP
Sbjct:    3 AYVPAQMGLPNCLVPSVPKIKVNPESCGKPSQIHGFLEMRIKSKETIGWIKFIDKVPFLVFGRDLGACHVFVGHPSVATQHAFAYWDLSSGFCMIQDMESEHGTSINGRTISHMQPTLLQLKDSIRFGNSAHVYIFDYLPPEYRDATGSASPPRPPMPPPDARTEASG--PLIPPRSRRMS-DSPRRGSDPPPGLDGFRRSPGRD-----PSSGEF----PPRMHEPLHRPGPPGGGR---------WSPGRDGGEPWRD---GRGRPMDDGYDRRPLPPDGPPPHPPGRFHPPP 273          
BLAST of Gcaud7604.t1 vs. uniprot
Match: A0A7S2ZH88_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH88_9RHOD)

HSP 1 Score: 71.6 bits (174), Expect = 4.850e-11
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   59 FLLFGRDLGASHVFVGHPTVSPQHAVAFWDRVSGLCMIQDLESEHGTFLNDNTVSHLEPAFIKPKDVIRFGTSA 132
            FL+FGRD+G   +FVGH +VS QHA   W + +  C + DLESE GT +N   +    P  I P+D I FG S+
Sbjct:   17 FLVFGRDVGCCDIFVGHASVSRQHAAVVWHK-NNYCYLLDLESESGTKINGRVLEPKVPMMIYPEDKITFGKSS 89          
BLAST of Gcaud7604.t1 vs. uniprot
Match: A0A6T6BYZ8_9RHOD (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BYZ8_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 6.460e-11
Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 0
Query:   54 MHPIPF----LLFGRDLGASHVFVGHPTVSPQHAVAFWDRVSGLCMIQDLESEHGTFLNDNTVSHLEPAFIKPKDVIRFGTSAHHFIF----DYLPLEYRDEEP 149
            +H +PF    ++FGRD   S+ FVGHP+VS QHA   W R   L  + DLESE+GT+++D  +   EP  + P   I F +    ++F    D +  E R   P
Sbjct:   60 VHVLPFQKGYMIFGRDPAVSNTFVGHPSVSRQHAAIVWSREDRLAYLIDLESENGTYIDDIQIPLNEPVKLLPGHRISFASCFRRYVFIDQYDRVVKELRKSRP 163          
The following BLAST results are available for this feature:
BLAST of Gcaud7604.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J4K6_9FLOR1.410e-6747.80FHA domain-containing protein n=1 Tax=Gracilariops... [more]
A0A7S2ZH88_9RHOD4.850e-1145.95Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A6T6BYZ8_9RHOD6.460e-1137.50Peptidyl-prolyl cis-trans isomerase n=1 Tax=Compso... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 59..112
e-value: 3.3E-5
score: 33.3
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 62..129
e-value: 1.3E-11
score: 44.6
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 60..112
score: 10.028999
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 53..137
e-value: 1.7362E-16
score: 72.8042
NoneNo IPR availableGENE3D2.60.200.20coord: 16..140
e-value: 1.1E-18
score: 69.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..316
NoneNo IPR availablePANTHERPTHR23308NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1coord: 52..144
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 56..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1007_length_15157_cov_3.910726contigNODE_1007_length_15157_cov_3.910726:3158..4402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7604.t1Gcaud7604.t1Gracilaria caudata M_176_S67 malemRNANODE_1007_length_15157_cov_3.910726 3158..4402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7604.t1 ID=Gcaud7604.t1|Name=Gcaud7604.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=415bp
MSVLPTQMGLPVCLVPSKLKYKPNNDALAEPSKIHGFQEIRHRTKETVGW
IKFMHPIPFLLFGRDLGASHVFVGHPTVSPQHAVAFWDRVSGLCMIQDLE
SEHGTFLNDNTVSHLEPAFIKPKDVIRFGTSAHHFIFDYLPLEYRDEEPP
SAQPPSMDARTEASNLPPPPLPPPRRLSNDSPSQRASGAFSRSPPRSDAM
DRPSARAFRMMGPPRRSTPLGGPRVPASEPDFMRPDEPDYDRERAMDNRW
NDRPIAAGEPMDDGRRRMPPPNSGRYPSRRGRNSPPPRPRDDRFDDRMPP
PMRDPRDFDRRPPPPDEFMDGPPPPHMPRRFGPPDGHPDDFRPPHDGDYD
RHAPPPMREFDDRGPPPPPSYRGRGGRDYEYERHRDDYRPRGGGGRGGYD
GRGQRHRPRQDDGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf