Gcaud7601.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7601.t1
Unique NameGcaud7601.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length329
Homology
BLAST of Gcaud7601.t1 vs. uniprot
Match: A0A2V3J4X2_9FLOR (Mite allergen Der p 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4X2_9FLOR)

HSP 1 Score: 349 bits (896), Expect = 2.700e-114
Identity = 160/226 (70.80%), Postives = 195/226 (86.28%), Query Frame = 0
Query:    2 SHVVSFYNEGCAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQIEAVFSHPDFFLPSHDITLVKFAADVPPGSRFVSVNVNADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEFETASTRSA 227
            SH++SFY+EGCAGTL+SP WALTAAHCLV+PSSKA+VAG  ++SGT V I+AV+SHP F LP +DI LVKF   +P   RF+ +N +  IP+VNE++RVAG+GYTDEGF+P+HD++LRQVDVP+VDT  CK+AY+ VDSFL SGI+ +MHICAGYQ GGCDSC+ADSGGPL VYD+Q  LVQIALVSFGYGCAR GVPGGYTRLS+YI+WMRSVGA+F T S+R+A
Sbjct:   60 SHIISFYDEGCAGTLISPEWALTAAHCLVKPSSKAYVAGAVADSGTLVTIKAVYSHPGFALPVNDIALVKFEKQLPSHCRFIRINDSPHIPSVNEYARVAGFGYTDEGFNPAHDSKLRQVDVPVVDTKDCKHAYRDVDSFLQSGISPNMHICAGYQEGGCDSCSADSGGPLFVYDSQRDLVQIALVSFGYGCARAGVPGGYTRLSNYISWMRSVGAQFNTTSSRTA 285          
BLAST of Gcaud7601.t1 vs. uniprot
Match: A0A2V3IXJ0_9FLOR (Serine protease 33 n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ0_9FLOR)

HSP 1 Score: 190 bits (482), Expect = 1.660e-52
Identity = 94/213 (44.13%), Postives = 128/213 (60.09%), Query Frame = 0
Query:   12 CAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQIEAVFSHPDFFL-----PSHDITLVKFAADVPPGSRFVSVNVNADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEF 219
            C+G+L+SP W +TAAHC +R S    + G   ++G   +I AV+ HP +         +DI LV+ ++  P  SRFV VN+N+  P    ++RV+GYG T +    S    LR VDVP+V    CK  Y   D  L+S +   + +CAG   GGCD+C  DSGGPL  +D    +VQ+ +VSFG GCA+ G PG YTRLSS+ AWM SVGAE+
Sbjct:  163 CSGSLISPTWVITAAHCDIRTSMLVSIGGSSVSNGVLHRIRAVYIHPSYNTFNSADTPNDIALVQLSSPAPASSRFVHVNMNSSFPPPGAYARVSGYGQTIQK-QFSGGPMLRLVDVPVVAMTKCKRDYSRADILLASRLREDVQLCAGLDAGGCDACQGDSGGPLTTFDENGNVVQVGVVSFGIGCAKAGFPGVYTRLSSFEAWMASVGAEY 374          
BLAST of Gcaud7601.t1 vs. uniprot
Match: R7Q6F4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6F4_CHOCR)

HSP 1 Score: 186 bits (472), Expect = 1.640e-49
Identity = 94/213 (44.13%), Postives = 127/213 (59.62%), Query Frame = 0
Query:   12 CAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQIEAVF--SHPDFFLPSHDITLVKFAADVPPGSRFVSVNVNADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEFETA 222
            C+G LLS RW LTAAHC +  S  A +AG +++SG P  I AV+    P F +   D  L+K + D PP ++F+S+N +  +P V  F R+ GYG   EG + S D +LRQVD+P+     CK+ + T+             +CAGY  G CDSC  DSGGP+++YD+  R + +A VS G GCARP +PG Y R S+ I W  SVGAEF  A
Sbjct:   13 CSGVLLSKRWVLTAAHCDITTSWTALIAGRQASSGAPRGISAVYLADSPGFTVEVRDSALLKLSQDAPPIAKFISINADPRLPPVQAFVRIVGYGREIEGEEVS-DNKLRQVDIPVTTFSFCKSVFNTITE---------DKVCAGYANGACDSCQGDSGGPVLLYDSNRRPIVVATVSSGIGCARPAIPGVYMRTSAIIDWATSVGAEFSIA 215          
BLAST of Gcaud7601.t1 vs. uniprot
Match: R7QQD9_CHOCR (Peptidase S1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQD9_CHOCR)

HSP 1 Score: 181 bits (460), Expect = 4.140e-49
Identity = 97/230 (42.17%), Postives = 127/230 (55.22%), Query Frame = 0
Query:    2 SHVVSFYNEG---CAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQIEAVFSHPDFFLPS----HDITLVKFAADVPPGSRFVSVNVNADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEFETAST 224
            SH+V+F       C+G+L+S RWA+TAAHC +    +  +       G   ++  VF HP +        +DI LV      P  +RF+ VN NA +P +  FSR  GYG   E         LRQVDVP+V    CK+ Y    + L+  ++  + +CAG   GGCD+C  DSGGPL V+D +  LVQI +VSFG GCARP  PG YTRLS +  WM   GAEF T ST
Sbjct:  104 SHMVAFVRSSLFVCSGSLISARWAITAAHCNINSDFRVSLGSTHVTDGVTRKVARVFRHPSYNPKRQDSPYDIALVLLDGSAPSSTRFIRVNNNASVPELEAFSRAFGYGQLRE--KELSAPVLRQVDVPVVPMPVCKDKYSMRSAPLAQELSDELQLCAGRPEGGCDACQGDSGGPLAVFDDEGNLVQIGIVSFGIGCARPNFPGVYTRLSFFQQWMIDTGAEF-TRST 330          
BLAST of Gcaud7601.t1 vs. uniprot
Match: A0A2V3IQW3_9FLOR (Trypsin-4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQW3_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 1.180e-47
Identity = 99/228 (43.42%), Postives = 126/228 (55.26%), Query Frame = 0
Query:    1 MSHVVSFYNEGCAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQIEAVFSHPDFF-----LPSHDITLVKFAADVPPGSRFVSVNVNADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEFETAS 223
            +SH   F    C  +LLS  WALTAAHC + PS    V G    +G    IE  F HP++        + DI L+K +  VP  S+F  VNV+A+ P  + F R  GYG T     PS    LR+VDVP+  T SC      V    S  ++  +H+CAGY  GGCDSC  DSGGPL  Y   L  VQ+ +VS+G  CA    PG YTRLS+++ WMR VGA F+T+S
Sbjct:   70 ISHFTGFM---CTASLLSEYWALTAAHCRLEPSDYLRVGGATVFAGRTYNIERTFRHPEYTKSASGTEASDIQLIKLSNPVPSDSKFFHVNVDANYPAPHSFVRACGYGDTYGTASPS-TGLLREVDVPVQTTGSCSKQLSDV----SISVDGDVHLCAGYDNGGCDSCYGDSGGPLFAYGKDLIPVQVGIVSYGVECALAMRPGVYTRLSTFVPWMRKVGAVFKTSS 289          
BLAST of Gcaud7601.t1 vs. uniprot
Match: A0A2V3IJA8_9FLOR (Trypsin I-P1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJA8_9FLOR)

HSP 1 Score: 155 bits (393), Expect = 3.740e-40
Identity = 97/247 (39.27%), Postives = 124/247 (50.20%), Query Frame = 0
Query:   12 CAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQIEAVFSHPDFFL----PSHDITLVKFAADVPPGSRFVSVNVNADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGC--DSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEFETASTRSAPTLAPSESXXXXXXXXTALGDGELD 252
            C+G+L+S RW LTAAHC VR      VA   + SG  + I  V +H  +         DI L++ A D P  + FV VNVN+ +P    F+R +GYG T        + +  QVD P+     CKN Y     FL     H   ICAGY +  C  DSCN DSGGPLV YD   R VQI + SFG  C   GVPG Y RLS Y+ WM   GA F T+ + +  T A   +        T + + + D
Sbjct:   82 CSGSLISSRWVLTAAHCDVRVDWIVRVAPSSAASGHHIPIFQVINHESYISNRVDSPGDIALIQLAHDAPLDTPFVHVNVNSTLPISGSFARTSGYGRT-RVHSSKRNPKPNQVDAPVNSPNRCKNTYH---GFLDVRPQH--FICAGYGKDRCNADSCNGDSGGPLVQYDQAGRPVQIGITSFGLRCGDNGVPGVYVRLSFYVQWMAQKGASFTTSGS-AVSTFAQGSAEAINDTPSTTIQESQSD 321          
BLAST of Gcaud7601.t1 vs. uniprot
Match: A0A2V3ISW9_9FLOR (Trypsin-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISW9_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 3.180e-39
Identity = 90/217 (41.47%), Postives = 119/217 (54.84%), Query Frame = 0
Query:   12 CAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQIEAVFSHPDFFLPSH---DITLVKFAADV--PPGSRFVSVNVNADIPNVNEFSRVAGYGY-TDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSF-LSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEFET 221
            C  T +S  W LTAAHC V  +    ++      G P  IE VF+HP++   +    DI L+K       PP    V +N  +D P    F RV+G+G  TDE    S+   LR  D+P+     C+ AYKTV +  L SG      +CAGY RGGCD+C  DSGGPLV +D    +VQ+A+VS   GCA  G PG   R+ + + WMRSVGA+F+T
Sbjct:   77 CTATRISKHWVLTAAHCKVTSNWTVSLSAPSIFGGAPAVIERVFNHPNYTSVTQRRFDIALIKVRPPPFEPPTFGTVKLNARSDRPADEAFVRVSGFGKSTDEPPTMSNFGSLRFADIPVYPFSKCRAAYKTVPAVGLLSG---QRQLCAGYARGGCDACAGDSGGPLVQFDDDGNVVQVAVVSAAKGCALAGFPGINARVDAVLDWMRSVGAQFDT 290          
BLAST of Gcaud7601.t1 vs. uniprot
Match: A0A2V3IDA2_9FLOR (Transmembrane protease serine 11C n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDA2_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 2.510e-33
Identity = 79/219 (36.07%), Postives = 115/219 (52.51%), Query Frame = 0
Query:   12 CAGTLLSPRWALTAAHCLVRPSSKAFVAG--LRSNSGTPVQIEAVFSHPDFFLPSHDITLVKFAADVPPGSR-----FVSVNVNADIPNVNEFSRVAGYG-YTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRSVGAEFETA 222
            C+ T LS  W LTAAHC V  + +  ++   +   +G    I++V  HP+F   + D +       VPP S       V +N    +P  N F RV+GYG Y + G        L   D+PI    +C +AY ++ S   S +    H+C GY+   C++C  DSGGP++ YD   R VQ+ +++  Y CAR G PG   R+S+ +AWMR VGA FE+A
Sbjct:   84 CSATRLSKNWVLTAAHCDVTTAWRVSLSSPSVGVENGIRASIQSVHIHPNFTYGTADPSDYALLRIVPPPSEQGNVHVVRLNEAPSLPVENAFVRVSGYGIYENYGALEPTAGELHFADIPIHPFSTCSSAYASLISSGLSPLKADNHLCMGYELNRCNACRGDSGGPVLQYDKNGRAVQVGIITASYECARTGFPGIGLRVSAALAWMREVGAVFESA 302          
BLAST of Gcaud7601.t1 vs. uniprot
Match: UPI001C08EB48 (tryptase-2-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C08EB48)

HSP 1 Score: 131 bits (330), Expect = 8.950e-33
Identity = 78/211 (36.97%), Postives = 112/211 (53.08%), Query Frame = 0
Query:   12 CAGTLLSPRWALTAAHCLVRPSSKAFVAG---LRSNSGTPVQIEAVFSHPDFF----LPSHDITLVKFAADVPPGS--RFVSVNVNADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMR 213
            C G+L++ +W LTAAHC+      A VAG   L   +G P  +  V  HP +     +P HDI LV+ A  V      R V +    D+ N +    V G+G   EG     +  ++Q+ +P+VD  +C+  Y   D           H+CAGY +GG DSC  DSGGPLV    + + VQ+ +VSFG+GCAR G PG YTR+ S+  +++
Sbjct:   56 CGGSLINSQWVLTAAHCVENLHVMAVVAGEQKLLEPTGLPYGVHRVLIHPGYHDDGDVPKHDIALVQLAEPVVISRHVRPVPLAGPLDVFNTSSECWVTGWGDVAEGTPLEGEETMQQLKLPLVDDKTCRLMYPRTDD---------NHLCAGYMQGGKDSCQGDSGGPLVCKSFE-QFVQVGVVSFGHGCARHGYPGVYTRVLSHTKFIQ 256          
BLAST of Gcaud7601.t1 vs. uniprot
Match: UPI001A982A59 (serine protease 27-like n=1 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A982A59)

HSP 1 Score: 130 bits (327), Expect = 6.660e-32
Identity = 80/216 (37.04%), Postives = 110/216 (50.93%), Query Frame = 0
Query:   12 CAGTLLSPRWALTAAHCLVRPSSKAFVA--------GLRSNSGTPVQIEAVFSHPDFFLPSH--DITLVKFAADVPPGSRFVSVNV---NADIPNVNEFSRVAGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSMHICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPGGYTRLSSYIAWMRS 214
            C G+L++ +W LTA HC    S+ + V         GL SN  + V +  +  HPD+   +H  DI L++ ++ V   +    V +   N+  P     S V G+G    G       RL++V +P+V    C N Y T+ S +         ICAG   GG DSC  DSGGP+V  D   R VQ  +VSFG GCARP +PG YTR+S Y  W+RS
Sbjct:   61 CGGSLINNQWILTATHCFSSSSTSSMVVYLGRETQEGLNSNEKS-VTVSRIIRHPDYNKDTHENDIALLELSSTVEFTNYIRPVCLAAGNSTFP-AGRTSWVTGWGDIRNGVSLPSPKRLQEVSIPVVSNTQCNNVYGTITSNM---------ICAGVSEGGKDSCQGDSGGPMVSKDGS-RWVQAGVVSFGSGCARPNIPGVYTRVSEYENWVRS 264          
The following BLAST results are available for this feature:
BLAST of Gcaud7601.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4X2_9FLOR2.700e-11470.80Mite allergen Der p 3 n=1 Tax=Gracilariopsis chord... [more]
A0A2V3IXJ0_9FLOR1.660e-5244.13Serine protease 33 n=2 Tax=Gracilariopsis chorda T... [more]
R7Q6F4_CHOCR1.640e-4944.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QQD9_CHOCR4.140e-4942.17Peptidase S1 domain-containing protein n=1 Tax=Cho... [more]
A0A2V3IQW3_9FLOR1.180e-4743.42Trypsin-4 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IJA8_9FLOR3.740e-4039.27Trypsin I-P1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A2V3ISW9_9FLOR3.180e-3941.47Trypsin-3 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IDA2_9FLOR2.510e-3336.07Transmembrane protease serine 11C n=2 Tax=Gracilar... [more]
UPI001C08EB488.950e-3336.97tryptase-2-like n=1 Tax=Alosa sapidissima TaxID=34... [more]
UPI001A982A596.660e-3237.04serine protease 27-like n=1 Tax=Xiphias gladius Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 161..173
score: 61.52
coord: 62..76
score: 25.88
coord: 13..28
score: 53.69
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 3..212
e-value: 4.8E-45
score: 165.7
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 4..212
e-value: 1.3E-36
score: 126.5
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 1..217
score: 23.749844
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 3..215
e-value: 1.34642E-51
score: 168.609
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 1..215
e-value: 2.1E-45
score: 157.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..259
NoneNo IPR availablePANTHERPTHR24253TRANSMEMBRANE PROTEASE SERINEcoord: 5..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 317..328
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 293..316
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 23..28
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 10..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1181_length_12913_cov_3.700515contigNODE_1181_length_12913_cov_3.700515:11436..12701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7601.t1Gcaud7601.t1Gracilaria caudata M_176_S67 malemRNANODE_1181_length_12913_cov_3.700515 11436..12701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7601.t1 ID=Gcaud7601.t1|Name=Gcaud7601.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=329bp
MSHVVSFYNEGCAGTLLSPRWALTAAHCLVRPSSKAFVAGLRSNSGTPVQ
IEAVFSHPDFFLPSHDITLVKFAADVPPGSRFVSVNVNADIPNVNEFSRV
AGYGYTDEGFDPSHDARLRQVDVPIVDTVSCKNAYKTVDSFLSSGINHSM
HICAGYQRGGCDSCNADSGGPLVVYDAQLRLVQIALVSFGYGCARPGVPG
GYTRLSSYIAWMRSVGAEFETASTRSAPTLAPSESQPQPQPQPTALGDGE
LDDGGLDDEDELLTPSAEAQKVGAPPGDGLFVVDDRDGASAGAIAGGAVG
GVALLALVGVVLAVAARRRRGAAAASPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR043504Peptidase_S1_PA_chymotrypsin
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA