Gcaud7592.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7592.t1
Unique NameGcaud7592.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length235
Homology
BLAST of Gcaud7592.t1 vs. uniprot
Match: A0A2V3J4C6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4C6_9FLOR)

HSP 1 Score: 279 bits (714), Expect = 1.310e-91
Identity = 150/237 (63.29%), Postives = 166/237 (70.04%), Query Frame = 0
Query:    1 MAVKEDPDSLWTSVGKTGFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPEKFQPKADFKPKKEEKTGLLATLDKTEFFEGFSMPTEEKEEEAVEAKE---ETTVSTTSDSEGPSPALYEQYFPADRLYKAPEIKIVFENDYLLDRVSLAMTEVTASATDLYYPKETKNKAPIIDISYNGNLSTASVSVSLELIEGLPTLPAPPKAEGDTIASLVPGPGGGLKLQFEAAGQGELNI 234
            MAVKED DSLWTSVGKT FKENVFTGGMPGGEAFY+AW+EDGM KD PDVP  FQPKA FKPK+E KTG+LA LDKTEFFEGF+MP E  EE+    +E   ET     +D  GP+PALYE+YFP     KAPEIKIV+ENDYL DRVS+AMTEVTAS +D+                              E IEGLPTLP PPKAEGDTI SLVPG GGGLKLQF+ AG G  N+
Sbjct:   38 MAVKEDSDSLWTSVGKTKFKENVFTGGMPGGEAFYRAWIEDGMEKDVPDVPSGFQPKAAFKPKEEVKTGILADLDKTEFFEGFNMPAESDEEKPASGEEKEGETVPEQAADDSGPNPALYEKYFPDSVRNKAPEIKIVYENDYLKDRVSVAMTEVTASFSDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHIEGLPTLPPPPKAEGDTITSLVPGAGGGLKLQFDVAGAGPANV 274          
BLAST of Gcaud7592.t1 vs. uniprot
Match: A0A1X6NKW0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKW0_PORUM)

HSP 1 Score: 138 bits (348), Expect = 1.450e-35
Identity = 93/251 (37.05%), Postives = 125/251 (49.80%), Query Frame = 0
Query:   26 GGMPGGEAFYKAWVEDGMTKDFPDVPEKFQPKADFKPKKEEKTGLLATLDKTEFFEGF-----SMPTEEKEEEAVEAKEETTVSTTSD--------------------------------------SEGPSPALYEQYFPADRLYKAPEIKIVFENDYLLDRVSLAMTEVTASATDLYYPKETKNKAPIIDISYNGNLSTASVSVSLELIEGLPTLPAPPKAEGDTIASLVPGPGGGLKLQFEAAGQGELN 233
            GG PGGE F+K WV+DGMT + PD+PE+ Q K  F+          A +D  E++         + ++ K  E +    +   +   D                                       +GP+PALYEQ++PAD+ Y AP I I   ND    RV L+M  V A   + Y+PKE  NKAP+IDI Y+G+L+TASVS+ +E +EGLP +   PK  GD   SLVP  GGGLKL F  +G   LN
Sbjct:   60 GGFPGGEDFFKKWVDDGMTGEVPDLPEELQSKTPFQEPD-------AVIDPREWYADMVPVPEGLISQPKVSEMIGKAGDAVANAVDDLAAATGTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPNPALYEQFYPADKRYLAPHIAISEAND----RVGLSMNAVEAGFYERYFPKERLNKAPVIDIFYSGSLNTASVSLKMEEVEGLPAVAVVPK--GDVQTSLVPSSGGGLKLDFSISGGEALN 297          
BLAST of Gcaud7592.t1 vs. uniprot
Match: A0A5J4YX67_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX67_PORPP)

HSP 1 Score: 118 bits (296), Expect = 2.820e-28
Identity = 84/211 (39.81%), Postives = 116/211 (54.98%), Query Frame = 0
Query:   21 ENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPEKFQPKADFKPKKEEKTGLLATLDKTEFFEGFSMPTEEKEEEAVEAKEETTVSTTSDSEGPSPALYEQYFPADRLYKAPEIKIVFENDYLLDRVSLAMTEVTASATDLYYPKETKNKAPIIDISYN-GNLSTASVSVSLELIEGLPTLPAP-PKAEGDTIASLVPGPGGG-LKLQFEAAG 228
            + +  GG PGGE F+K W+ +G   + P++    QP +       +KTG     DK+    G   P        +  +EET      D E P P LY +YF ADRL+KAPEI   + N    DRV +  TEVT+ A++ ++PK   N+AP+I+ISY  G +STASVS+S+  I G P LP P PK  GD   ++V  P  G LKL+F+  G
Sbjct:  109 KTLLAGGFPGGEFFFKKWIGEGAQGEVPNLDADLQPGSG----SAKKTGKKEDADKSSPG-GIMTPGRIMVPSGLGEEEETV-----DKEAPRPELYNKYFSADRLHKAPEILFEY-NKTKYDRVGVRYTEVTSKASERFFPKSRMNRAPVIEISYREGAVSTASVSLSMPEISGPPALPFPVPK--GDVTTTMVTDPTTGRLKLEFKVDG 306          
BLAST of Gcaud7592.t1 vs. uniprot
Match: A0A7S1TJB6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJB6_9RHOD)

HSP 1 Score: 57.8 bits (138), Expect = 6.440e-7
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   14 VGKTGFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDVPEKFQPKAD 59
            +GKT +KE+ FTGG PGGE F++ WV+DGMT   PD+  + QP AD
Sbjct:   32 MGKTMWKESWFTGGFPGGEGFFRQWVDDGMTGAVPDLEPERQPSAD 77          
BLAST of Gcaud7592.t1 vs. uniprot
Match: A0A7S0ZJ31_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJ31_9RHOD)

HSP 1 Score: 57.4 bits (137), Expect = 4.150e-6
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   25 TGGMPGGEAFYKAWVEDGMTKDFPDVPEKFQPKADFKPKKEEKTGLLAT 73
            TGG PGGEAFYK W+ +GMT D P + EK QPK D+  ++EE   + +T
Sbjct:   51 TGGFPGGEAFYKKWISEGMTGDIPALDEKRQPKGDYVSEEEEYVPIGST 99          
The following BLAST results are available for this feature:
BLAST of Gcaud7592.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J4C6_9FLOR1.310e-9163.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NKW0_PORUM1.450e-3537.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YX67_PORPP2.820e-2839.81Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1TJB6_9RHOD6.440e-756.52Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZJ31_9RHOD4.150e-653.06Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_226_length_35554_cov_4.545132contigNODE_226_length_35554_cov_4.545132:27098..27802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7592.t1Gcaud7592.t1Gracilaria caudata M_176_S67 malemRNANODE_226_length_35554_cov_4.545132 27098..27802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7592.t1 ID=Gcaud7592.t1|Name=Gcaud7592.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=235bp
MAVKEDPDSLWTSVGKTGFKENVFTGGMPGGEAFYKAWVEDGMTKDFPDV
PEKFQPKADFKPKKEEKTGLLATLDKTEFFEGFSMPTEEKEEEAVEAKEE
TTVSTTSDSEGPSPALYEQYFPADRLYKAPEIKIVFENDYLLDRVSLAMT
EVTASATDLYYPKETKNKAPIIDISYNGNLSTASVSVSLELIEGLPTLPA
PPKAEGDTIASLVPGPGGGLKLQFEAAGQGELNI*
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