Gcaud7586.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7586.t1
Unique NameGcaud7586.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length783
Homology
BLAST of Gcaud7586.t1 vs. uniprot
Match: A0A2V3J5N6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N6_9FLOR)

HSP 1 Score: 917 bits (2369), Expect = 0.000e+0
Identity = 454/787 (57.69%), Postives = 576/787 (73.19%), Query Frame = 0
Query:    1 MKSHVSLLKEKCGLYDLRFAPSKSLKNEFGSSIYYDWVGPNMPTPTLLKFVKNPVSYFFARKGANRSLLGDNSAPKM--INRTCIPAPNEESGAEVSVVCGSRPEGRIAHPAIVINTDMKQPKAHSDFYHLIRTTYRERHGEIIRILDPYSRALKRPKLCFRSIIASGTADFLAGFTTRSSTGTPQNVSDLQWTFKDEKNASPQTFSSKNRRDPHEFKPVRNETSAGLRERDDNKGTSETLPTFEEFEVSELRTDHNESDITIRLETEGGVEMFTHRAVDGVQWNSSHAEEPSEHVYGICRVYRACLRADRSIVLPKWMNKSAMSLKNHCGIESITFLQDDEFDLMFEKIKLSSRNKRVSNPIASQPDMEVFFDLIGTREYRTQKHHFVTDFLHDGIHAMDALYNRDDTGMTSFRRRCIYRPDSNVGKEAHEMGTCAHGPMKVDDLKPLFLLDKRFRSSNMHGKFIRQLAAMMPPKNTKGPGFIRASELSKSGYEQSTCFRSIVVTRNAYPPSSVLEASEKNIFFTQNNISREAPKPIVEGECKVRVALIPAQKQRKVNIWAKGEGELVNEDDIVSAIKTVGHAMAEQGAAN---VTIDVVKAKRVGHDLLEDKKMIQGSEVILSPNNPSLTSIMFARPHTLLVEVQPFSYAAGPYRSFAGTFKLGYRSIMANPDYETFKKCVNDNFKMDWVGNISEAELAAHKEGLLKLYRDARDSFNGTVSELHLEHRKSGSGVMRKHYIPKERVCARAQRLKVDANLVAVIVGKHTADLCKRHAEQASRLEAVL 782
            MK H+S+L+EKCGL +L FAP KSLKNEFG+ +YYDW+GPN+ TP LLKF KNP S+FFA K A +SLL  N    +  + RTCIPAP     +++S VC S+PEG IAHPAI++NT   QPKA SDFY + R TY E+HGE + ILDP SR L+RP +CFRSIIAS +AD  AGFT  S+  T                                      ++S  L    +   T   L TF+E+E ++L  +H +  +  ++E+EGGVE+FTHRAVDG  WN+S  EE S+HVYGICR+YRAC  AD+SIVLP WM  +++ L+ HCGI+S+TFLQDDEFDLM+EK+++SSRN+R+ N   SQPDMEVFFDLIG REYR QKHHFVTDFL DGIHA+DAL+NRD+TGMTSF+R+CIYRPDSNV K A   G CAH P+K+D+L+P+ +L+ R +SS  HGK+IRQLAAMMPPK  +GPG +  SELS+SGY QSTCFRSIV TRN+YPPSSVL+A+E+N+FF QNNISRE  K   EGEC+V V ++  QK +K   W K +GEL NEDDIV+AI+T+G A+ +   +      I V + K  G+D+ EDKK+IQ S +I+S NNPSLT I+FA+P T++VEVQPFSY+AGPYRSFAGT KL Y+S+MAN DY+ F+ CV D++K DW GN+S +E+ A KEGLLKL+RDARD+FNG  S+LHLE R+   G +R+ +IP+ERVCARAQRL VDANL+A+IVGK  A LC++HA+   RL+AVL
Sbjct:  113 MKKHLSILEEKCGLTELNFAPVKSLKNEFGTPMYYDWLGPNLRTPALLKFSKNPTSHFFAHKNATKSLLDTNQNENVSSVRRTCIPAPKHIRKSDMSAVCDSQPEGHIAHPAILVNTIPGQPKAESDFYSVYRRTYMEKHGESVTILDPKSRLLRRPIVCFRSIIASASADHNAGFTAESTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--QSSRVL----NTSTTYGMLNTFDEYEDTQLNGEHGQQHLVHKMESEGGVELFTHRAVDGQSWNNSKQEELSKHVYGICRLYRACRGADQSIVLPNWMKNNSVQLQEHCGIDSLTFLQDDEFDLMYEKVRVSSRNRRLLNSRGSQPDMEVFFDLIGMREYRAQKHHFVTDFLRDGIHALDALFNRDETGMTSFKRQCIYRPDSNVRKAALRDGVCAHAPVKIDELRPVLILNDRMKSSGAHGKYIRQLAAMMPPKKGRGPGILLNSELSRSGYNQSTCFRSIVFTRNSYPPSSVLDAAERNVFFAQNNISRETAKGSGEGECEVHVTMLRPQKHKKSKRWFKNQGELTNEDDIVAAIETLGKAILDDSRSKEQTANIVVRRMKHSGYDIEEDKKLIQQSHIIISTNNPSLTGIVFAKPGTVVVEVQPFSYSAGPYRSFAGTLKLDYQSVMANADYQAFEGCVKDSYKKDWTGNVSASEMEAKKEGLLKLFRDARDNFNGASSDLHLEKRELDKGGLRQFHIPQERVCARAQRLVVDANLIAIIVGKKAAALCQKHAKHRLRLDAVL 893          
BLAST of Gcaud7586.t1 vs. uniprot
Match: A0A1X6NXK0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXK0_PORUM)

HSP 1 Score: 76.6 bits (187), Expect = 1.410e-10
Identity = 67/247 (27.13%), Postives = 105/247 (42.51%), Query Frame = 0
Query:  566 LVNEDDIVSAIKTVG----HAMAEQGAANVTIDVVKAKRVGHDLLEDKKMIQGSEVILSPNNPSLTSIMFARPHTLLVEVQPFSYAAGPYRSFAGTFKLGYRSIMANPDYETFKKCVNDNFKMDWVGNISEAELAAHKE-------------------------------GLLKLYRDARDSFN--GTVSELHLEH-----RKSGSGVMRKHY-IPKERVCARAQRLKVDANLVAVIVGKHTADLCK 769
            L N + +++A+        +A   +G   + + +V+   VG   L     +QG+ V+L+P +PSL ++++ RP + +VEV PF+Y  G   + A    + +R ++A PD  TF+ CV +  KMD  G    A                                       LL  +  A D +   G V  L L+      R  G G       +P+ER CARAQRL  D   VA +V     D+C+
Sbjct:  906 LANAEALITALHRRAASSVNARRLRGGLTLRVRLVRPAAVGVRALMGA--LQGAHVVLAPTDPSLGAVLYVRPGSTVVEVSPFAYYGGGVAALAAALGVAHRRVVAPPDSATFRACV-EAVKMDGWGAAGRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGAVAALLAAWDAAADDYAAFGKVDGLRLDQGVGRGRGVGGGDAGDRLRLPRERECARAQRLAPDPAAVAAVVVAAAVDVCQ 1149          
The following BLAST results are available for this feature:
BLAST of Gcaud7586.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5N6_9FLOR0.000e+057.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NXK0_PORUM1.410e-1027.13Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_226_length_35554_cov_4.545132contigNODE_226_length_35554_cov_4.545132:8373..10721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7586.t1Gcaud7586.t1Gracilaria caudata M_176_S67 malemRNANODE_226_length_35554_cov_4.545132 8373..10721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7586.t1 ID=Gcaud7586.t1|Name=Gcaud7586.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=783bp
MKSHVSLLKEKCGLYDLRFAPSKSLKNEFGSSIYYDWVGPNMPTPTLLKF
VKNPVSYFFARKGANRSLLGDNSAPKMINRTCIPAPNEESGAEVSVVCGS
RPEGRIAHPAIVINTDMKQPKAHSDFYHLIRTTYRERHGEIIRILDPYSR
ALKRPKLCFRSIIASGTADFLAGFTTRSSTGTPQNVSDLQWTFKDEKNAS
PQTFSSKNRRDPHEFKPVRNETSAGLRERDDNKGTSETLPTFEEFEVSEL
RTDHNESDITIRLETEGGVEMFTHRAVDGVQWNSSHAEEPSEHVYGICRV
YRACLRADRSIVLPKWMNKSAMSLKNHCGIESITFLQDDEFDLMFEKIKL
SSRNKRVSNPIASQPDMEVFFDLIGTREYRTQKHHFVTDFLHDGIHAMDA
LYNRDDTGMTSFRRRCIYRPDSNVGKEAHEMGTCAHGPMKVDDLKPLFLL
DKRFRSSNMHGKFIRQLAAMMPPKNTKGPGFIRASELSKSGYEQSTCFRS
IVVTRNAYPPSSVLEASEKNIFFTQNNISREAPKPIVEGECKVRVALIPA
QKQRKVNIWAKGEGELVNEDDIVSAIKTVGHAMAEQGAANVTIDVVKAKR
VGHDLLEDKKMIQGSEVILSPNNPSLTSIMFARPHTLLVEVQPFSYAAGP
YRSFAGTFKLGYRSIMANPDYETFKKCVNDNFKMDWVGNISEAELAAHKE
GLLKLYRDARDSFNGTVSELHLEHRKSGSGVMRKHYIPKERVCARAQRLK
VDANLVAVIVGKHTADLCKRHAEQASRLEAVL*
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