Gcaud7549.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7549.t1
Unique NameGcaud7549.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length132
Homology
BLAST of Gcaud7549.t1 vs. uniprot
Match: A0A2V3IL20_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL20_9FLOR)

HSP 1 Score: 137 bits (345), Expect = 2.260e-39
Identity = 81/119 (68.07%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    4 QTAFVSSFTPSLNTSTSSFVSPATARAHAAKSFVATPRMALQTKEKPKVVQSPYRSLEANRAAKLNSEYRGPQGFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIMFSPLIHL 122
            +TAFVSSF PS   +TS F  PA + +H   +F A PRMAL TK  P   +S + S+E NR AKL SEYRGPQGFTPYAEKVNGRLAQ+GF+IGL+TEIITGKGINEQILIMFSPL  L
Sbjct:    4 ETAFVSSFAPSAPITTSPF-RPARS-SHRVATFSAAPRMALGTKS-PDKEKSTFTSIEDNRVAKLESEYRGPQGFTPYAEKVNGRLAQMGFLIGLITEIITGKGINEQILIMFSPLTRL 119          
BLAST of Gcaud7549.t1 vs. uniprot
Match: A0A2V3IEM4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM4_9FLOR)

HSP 1 Score: 134 bits (337), Expect = 3.720e-38
Identity = 79/122 (64.75%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    1 MNPQTAFVSSFTPSLNTSTSSFVSPATARAHAAKSFVATPRMALQTKEKPKVVQSPYRSLEANRAAKLNSEYRGPQGFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIMFSPLIHL 122
            M   TAFVSSF PS   +TS F  P ++  H    F A PRMAL T    K  +S + S+E NRAA+L+SEYRGPQGFTPYAEKVNGRLAQ+GF+I L+TEIITGKGINEQILIMFSPL  L
Sbjct:    1 MTCATAFVSSFAPSAPITTSPFRPPRSS--HRVPPFSAAPRMALTTNSADKK-KSTFTSIEDNRAARLDSEYRGPQGFTPYAEKVNGRLAQMGFLIALITEIITGKGINEQILIMFSPLTRL 119          
BLAST of Gcaud7549.t1 vs. uniprot
Match: M2W373_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W373_GALSU)

HSP 1 Score: 69.3 bits (168), Expect = 1.580e-12
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   54 QSPYRSLEANRAAKLNSEYRGPQGFTPYAEKVNGRLAQLGFVIGLVTEI 102
            +SPY+ LE N  AK N+EYRGPQGFTPYAE VNGRLA +GF   +V E+
Sbjct:   54 ESPYKKLEENVQAKKNAEYRGPQGFTPYAETVNGRLAMIGFFSMIVAEL 102          
BLAST of Gcaud7549.t1 vs. uniprot
Match: Q2JR34_SYNJA (CAB/ELIP/HLIP family protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=Q2JR34_SYNJA)

HSP 1 Score: 57.4 bits (137), Expect = 1.130e-8
Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0
Query:   77 GFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIM 115
            GFTP+AEK NGRLA LGFVIG+ TE++TG+GI  QI +M
Sbjct:   18 GFTPFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM 56          
BLAST of Gcaud7549.t1 vs. uniprot
Match: A0A0D6AF44_9CHRO (CAB/ELIP/HLIP family protein n=1 Tax=Geminocystis sp. NIES-3708 TaxID=1615909 RepID=A0A0D6AF44_9CHRO)

HSP 1 Score: 56.2 bits (134), Expect = 2.590e-8
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   77 GFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIM 115
            GFTP+AE  NGRLA LGFVIG+ TE++TGKGI  Q+ +M
Sbjct:    9 GFTPFAENWNGRLAMLGFVIGIATELLTGKGILAQLGLM 47          
BLAST of Gcaud7549.t1 vs. uniprot
Match: UPI000684C737 (chlorophyll a/b-binding protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI000684C737)

HSP 1 Score: 55.8 bits (133), Expect = 5.030e-8
Identity = 26/36 (72.22%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   77 GFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQI 112
            GFT YAEK NGRLA LGFVIGL TE +TG+GI  Q+
Sbjct:   23 GFTDYAEKFNGRLAMLGFVIGLATEFLTGQGILSQL 58          
BLAST of Gcaud7549.t1 vs. uniprot
Match: A0A0C1Y4X3_9CYAN (High light inducible protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1Y4X3_9CYAN)

HSP 1 Score: 55.5 bits (132), Expect = 5.170e-8
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   70 SEYRGPQGFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIM 115
            +E +G  GFT +AE  NGRLA LGFVIG+ TE+ITG+GI  Q+ +M
Sbjct:    2 TEEQGKFGFTEFAENWNGRLAMLGFVIGIATELITGQGILSQLGLM 47          
BLAST of Gcaud7549.t1 vs. uniprot
Match: A0A6G3YXY0_9CYAN (High light inducible protein n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A6G3YXY0_9CYAN)

HSP 1 Score: 54.7 bits (130), Expect = 1.030e-7
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   70 SEYRGPQGFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIM 115
            +E +G  GFT +AE  NGRLA LGFV+GL TE++TG+GI  Q+ +M
Sbjct:    2 AEEQGKFGFTQFAENWNGRLAMLGFVVGLATELMTGQGILSQLGLM 47          
BLAST of Gcaud7549.t1 vs. uniprot
Match: A8ZK91_ACAM1 (Conserved domain protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=A8ZK91_ACAM1)

HSP 1 Score: 54.3 bits (129), Expect = 1.370e-7
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0
Query:   77 GFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIMFS 117
            GFT +AE +NGRLA LGF++G VTEII+G+G+  QIL +FS
Sbjct:    3 GFTHFAETLNGRLAMLGFLLGWVTEIISGEGMLSQILSIFS 43          
BLAST of Gcaud7549.t1 vs. uniprot
Match: A0A8J2TM81_9CHRO (CAB/ELIP/HLIP family protein n=1 Tax=Chroococcus sp. FPU101 TaxID=1974212 RepID=A0A8J2TM81_9CHRO)

HSP 1 Score: 53.9 bits (128), Expect = 1.970e-7
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0
Query:   73 RGPQGFTPYAEKVNGRLAQLGFVIGLVTEIITGKGINEQILIM 115
            +G  GFT +AE  NGRLA LGF IG++TE++TGKGI  QI +M
Sbjct:    3 KGKFGFTAFAENWNGRLAMLGFTIGILTELMTGKGILAQIGLM 45          
The following BLAST results are available for this feature:
BLAST of Gcaud7549.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IL20_9FLOR2.260e-3968.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEM4_9FLOR3.720e-3864.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2W373_GALSU1.580e-1265.31Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
Q2JR34_SYNJA1.130e-869.23CAB/ELIP/HLIP family protein n=4 Tax=Cyanobacteria... [more]
A0A0D6AF44_9CHRO2.590e-866.67CAB/ELIP/HLIP family protein n=1 Tax=Geminocystis ... [more]
UPI000684C7375.030e-872.22chlorophyll a/b-binding protein n=1 Tax=Synechococ... [more]
A0A0C1Y4X3_9CYAN5.170e-858.70High light inducible protein n=3 Tax=Cyanobacteria... [more]
A0A6G3YXY0_9CYAN1.030e-756.52High light inducible protein n=2 Tax=unclassified ... [more]
A8ZK91_ACAM11.370e-763.41Conserved domain protein n=1 Tax=Acaryochloris mar... [more]
A0A8J2TM81_9CHRO1.970e-760.47CAB/ELIP/HLIP family protein n=1 Tax=Chroococcus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 75..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_232_length_35106_cov_4.900328contigNODE_232_length_35106_cov_4.900328:13009..13404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7549.t1Gcaud7549.t1Gracilaria caudata M_176_S67 malemRNANODE_232_length_35106_cov_4.900328 13009..13404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7549.t1 ID=Gcaud7549.t1|Name=Gcaud7549.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=132bp
MNPQTAFVSSFTPSLNTSTSSFVSPATARAHAAKSFVATPRMALQTKEKP
KVVQSPYRSLEANRAAKLNSEYRGPQGFTPYAEKVNGRLAQLGFVIGLVT
EIITGKGINEQILIMFSPLIHLVESLARIAH*
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