Gcaud7541.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7541.t1
Unique NameGcaud7541.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length542
Homology
BLAST of Gcaud7541.t1 vs. uniprot
Match: A0A2V3IQ66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ66_9FLOR)

HSP 1 Score: 609 bits (1571), Expect = 2.170e-211
Identity = 308/545 (56.51%), Postives = 421/545 (77.25%), Query Frame = 0
Query:    1 MSKEEEIRLENIAKNHVPRNLREAIDAIEVIKIPKKAMLAALRTLNVKV-AELRIVYCREILATKLVQRQLCMSTVLDCIDDFDIKNPSLANERHHRLRKLPETFARGPDKKKKEEDHIFWLSGDMPVYGDNRNVVPGMPPLDEVIARIEREKSKPEQEAAESAPVPEERKEKVAHTLPPADFGNVAAEETQDDNSEVSDDAQPFGDGEYCRLLHVLADKRVAPYLSQLRDPELKEKPWTLHVAPIFNDKKFRPVPIKSVSGGVKRRDIIGIYPRFICERDGETLQQKFAAFKSLYRAAVRGYVQFGDDKSHTFVNFCQSKRYIMYAFCLLENFPQLEPLTLKPEET-RDEVR-----TKAGNASKRPITLVDLDGEDDLADIPATPVAKRAKAAMLGDKERDELKKIIEGGVPDDLGNTFGGQPGFNPQMTRSEEIQWREREEKDKAVYDAIARTGGMGSEGLLWCLLRSAPGSAKFMDIEDRLREKILTELRHAQDSHLISLLTGLREARTLLADTQDPQEAALYARSKSLMLSNLRSNLRRR 538
            +S+E+  RLENIAKNH+P ++REA+DA+++I + K+++  AL+TLNVK  +E+R+   REI+A K+VQRQLC++T++DC D+FDIKNPSLANE+HHRLR+LPET ARGP K+K   D I W+SGD+P+Y +   VVPGMPPL+ V+A++   K + EQ+A  + PV E ++ +   ++P     +  A+ET D+NSE S++A  F DGEYCRLLH LADK +APYL+QL DP+LKEKPW  HVAP+FN++KFRPVPIK+V+ GV+  DI G+ PR++CERDGETLQQKFA F+SLYRAAVR Y+++G+D + +F +F Q+K+YI YAFCLLEN+PQLEPLTLK  ET R+E       T A  ++KR I  VDL+G++++ D+  +P AKRAKAAMLGD+ERDEL KII G +P+++ N  G Q GF   +T+SEEI+ +EREEKD+A++DAIA++GG+GSEGL+W LLRSAP S KF +IED+L EKI+TE   AQD ++I+LL GLR+A+ ++A+ Q  +E A++ R K  M S LR  +RRR
Sbjct:   85 LSREDIQRLENIAKNHLPTSMREAVDALQIIILNKRSVRHALKTLNVKTPSEVRVAVGREIIAAKMVQRQLCLATIIDCADEFDIKNPSLANEQHHRLRRLPETVARGPYKRKGAPDRIHWISGDVPMYDERELVVPGMPPLENVLAQMAN-KQQQEQDAF-NVPVAEPQQVEQTPSIPT----DRIADETHDENSEESEEAPEFEDGEYCRLLHALADKSLAPYLNQLLDPQLKEKPWVEHVAPLFNNRKFRPVPIKAVAHGVRLSDIRGLSPRYMCERDGETLQQKFAEFRSLYRAAVRSYLEWGNDDTSSFADFSQAKQYITYAFCLLENYPQLEPLTLKAAETQREEAESAAKPTSAAASAKRSIASVDLEGDEEMGDLHPSPTAKRAKAAMLGDRERDELLKIIGGDIPEEIRNVSGDQAGFTVPLTKSEEIRMKEREEKDRAMFDAIAKSGGLGSEGLMWNLLRSAPSSGKFREIEDKLIEKIVTEAEEAQDRYIITLLNGLRDAQNMMAEAQTSEEKAVFQRVKDTMYSTLRERVRRR 623          
The following BLAST results are available for this feature:
BLAST of Gcaud7541.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ66_9FLOR2.170e-21156.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_51_length_65224_cov_4.623524contigNODE_51_length_65224_cov_4.623524:55308..56933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7541.t1Gcaud7541.t1Gracilaria caudata M_176_S67 malemRNANODE_51_length_65224_cov_4.623524 55308..56933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7541.t1 ID=Gcaud7541.t1|Name=Gcaud7541.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=542bp
MSKEEEIRLENIAKNHVPRNLREAIDAIEVIKIPKKAMLAALRTLNVKVA
ELRIVYCREILATKLVQRQLCMSTVLDCIDDFDIKNPSLANERHHRLRKL
PETFARGPDKKKKEEDHIFWLSGDMPVYGDNRNVVPGMPPLDEVIARIER
EKSKPEQEAAESAPVPEERKEKVAHTLPPADFGNVAAEETQDDNSEVSDD
AQPFGDGEYCRLLHVLADKRVAPYLSQLRDPELKEKPWTLHVAPIFNDKK
FRPVPIKSVSGGVKRRDIIGIYPRFICERDGETLQQKFAAFKSLYRAAVR
GYVQFGDDKSHTFVNFCQSKRYIMYAFCLLENFPQLEPLTLKPEETRDEV
RTKAGNASKRPITLVDLDGEDDLADIPATPVAKRAKAAMLGDKERDELKK
IIEGGVPDDLGNTFGGQPGFNPQMTRSEEIQWREREEKDKAVYDAIARTG
GMGSEGLLWCLLRSAPGSAKFMDIEDRLREKILTELRHAQDSHLISLLTG
LREARTLLADTQDPQEAALYARSKSLMLSNLRSNLRRRQER*
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