Gcaud7535.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7535.t1
Unique NameGcaud7535.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length249
Homology
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A2V3IXJ8_9FLOR (DNA replication complex GINS protein SLD5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ8_9FLOR)

HSP 1 Score: 314 bits (804), Expect = 1.980e-105
Identity = 162/248 (65.32%), Postives = 197/248 (79.44%), Query Frame = 0
Query:    1 MSSFSDHGDEIPRFSFGSMALSEEQSNRGRTHSRLPNASDGDDPSQAGLNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAIPLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSGPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            MSS S H ++ PRFSFG+MALSEE S   R  SRL N +  DD     LNEA+D+M MLARNEQ+SPE+LP+  QT+ VIR+LV QQ D+VD+E+++E+   +ESQLKRLE+DRINY LR Y+RVRI KIE NI FI KNA+    LSDAE+ YA+ YK L++DHF KSFLSMLPQKIQV+E DGSV+H +GP+LDRFVFCRVR++VGRIA+GED  SDA+NL   DILCVRYK +AELL+ EDVELL
Sbjct:    1 MSSDSQHDNDTPRFSFGAMALSEEPSRLARAQSRLQNVASIDDAPNTSLNEAVDIMRMLARNEQYSPELLPFQTQTVSVIRSLVSQQLDIVDQEDELEENTSIESQLKRLELDRINYLLRHYYRVRIAKIENNIFFISKNAEASELLSDAEEKYAADYKRLIDDHFSKSFLSMLPQKIQVLEVDGSVDHAAGPNLDRFVFCRVRNDVGRIALGEDEGSDALNLGHGDILCVRYKGIAELLKGEDVELL 248          
BLAST of Gcaud7535.t1 vs. uniprot
Match: R7Q402_CHOCR (DNA replication complex GINS protein SLD5 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q402_CHOCR)

HSP 1 Score: 249 bits (637), Expect = 4.230e-80
Identity = 133/247 (53.85%), Postives = 185/247 (74.90%), Query Frame = 0
Query:    5 SDHGDEIPRFSFGSMALSEEQSNRGRTHSRLPNASDGDDPSQAG--LNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIE-DAIPLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSGPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            S + D+ PRFSFGSMAL+EE    GR    + +     DP Q G  LNE +D +  +A NE F PEILP+  +TI+ + + VKQQ++LV+EEED   DA+  ESQLKR+EIDRINY LR Y+R+RIKKIE ++LFIFK+ +    LS  E+ +A+GY +L+E+HFKKSFLSMLP+K+QV++KDG+V+H +GP+L +FVFC+V+++VG  AVGE+A  + ++LNQ DILC+RYKS+ +LL   DV+L+
Sbjct:    3 STNNDDQPRFSFGSMALTEEP---GRGPLAIDSHLSHLDPDQLGGQLNETLDKLRTVAVNEYFCPEILPFETETIQAMSSEVKQQTELVEEEEDESVDALSFESQLKRMEIDRINYLLRHYYRMRIKKIEGSVLFIFKDLNTFELLSKHEQNFATGYMDLVEEHFKKSFLSMLPKKVQVLDKDGNVDHATGPNLHKFVFCKVKNSVGSYAVGEEAGDETLDLNQGDILCIRYKSIQQLLMKGDVDLI 246          
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A0L0D2U3_THETB (DNA replication complex GINS protein SLD5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2U3_THETB)

HSP 1 Score: 110 bits (275), Expect = 4.560e-26
Identity = 71/232 (30.60%), Postives = 127/232 (54.74%), Query Frame = 0
Query:   19 MALSEEQSNRG-RTHSRLPNASDGDDPSQAGLNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAIPLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQ-VIEKDGSVEHDSGPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            MALS  QS+ G + HS             A  N  I+ +     NE+FSP +L + D  +  +   VK+Q D+V  E  ++D     ++LK+LE++R+ Y LR Y+R R++KIE+  ++I KN  +   LS AE  Y   Y +L+ +H  +SFL+ LP+K++ +  +D   +    P+ D  VFC+V   +G   + +D+   +++L + ++  + +K + +LL  + + L+
Sbjct:    1 MALSSSQSSWGLKGHS-----------GAAVQNNDIEALKQAWLNEKFSPHVLIFEDALVARVSEDVKEQEDVVAGE--LDDGATFMTRLKQLELERVKYLLRSYYRTRLRKIEKFCMYILKNPVVRTRLSPAELEYTQRYVDLMAEHLNESFLNGLPEKLRDLTTQDAEDDMIPAPNFDTHVFCKVVDTIGTFQLDQDS---SVDLEEGELYLLPFKPIRDLLLDQSIILI 216          
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A024GPQ5_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GPQ5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.100e-25
Identity = 64/212 (30.19%), Postives = 116/212 (54.72%), Query Frame = 0
Query:   41 GDDPSQAGLNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAIPLE----SQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSGPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            GD  +   +NE ++ M  L RNE  +P++L Y +  +  +   +K Q + +D   D  + +  E    ++L ++EIDR+ Y L  Y R R+KKIE+   +I K    L+ LS+ E+IYA  +  L+  H   + LS +P + Q ++ +G     S P+LD FVFC+ +  VG++   +D  ++ + + + D   +RY+S+   ++S  + L+
Sbjct:    2 GDQEATNDVNEDVEKMITLWRNELNAPDMLEYNNDLVAALLEQIKNQQEYIDSISDNRECLTEERSFTNKLYQMEIDRLRYMLASYLRTRLKKIEKYSQYIIKTPAYLDRLSEKERIYAQQHAALVATHLNNAALSKIPDEHQSLDSEGMA---SEPNLDEFVFCQSQGEVGQVRC-DDRGAEFVQVREKDRHVIRYRSIDNFVKSNQIFLI 209          
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A5J4Z3G8_PORPP (DNA replication complex GINS protein sld5 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3G8_PORPP)

HSP 1 Score: 109 bits (273), Expect = 8.590e-25
Identity = 66/209 (31.58%), Postives = 117/209 (55.98%), Query Frame = 0
Query:   62 NEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAI-----------PLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNAD---MLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIE-KDGSVEHDSGPSLDRFVFCRVRS-------NVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            NEQ++PE+LP+A      +  L++ Q  L+D+E    D              L   L+R E++R+ Y LR Y RVR++KIE+   F+  +A    +   LS+ E+ +A+ Y  LLE H   SFL +LP++++ ++ KD +V   + P +D +VFCRV          +   A G + + + + ++ N+I+C+RY+S A L+ ++ ++L+
Sbjct:  117 NEQYAPELLPFATDVTHDMHELLEYQEQLLDDELHETDGAGQRDAEAVSFAQLSRLLRRTELERLRYVLRAYHRVRLRKIERTAPFLLSSAGAHTLATRLSEPERDFATSYLTLLEQHLTSSFLQLLPERLRALDDKDDTVAMIAPPHIDAYVFCRVLEPPPGGVLRLNNDAGGREEIQE-LRMSTNEIICMRYRSAAPLVLAKQLQLI 324          
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A250XBE6_9CHLO (DNA replication complex GINS protein SLD5 n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XBE6_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 3.370e-24
Identity = 67/206 (32.52%), Postives = 108/206 (52.43%), Query Frame = 0
Query:   42 DDPSQAGLNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAIPLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSG-----PSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQS 242
            DD S +  +  ++ +     NE+ +PEILPY    ++ ++  V++Q DL+ E+ D E A  L   +  LE+ RI Y LRLYFR R++K+E     +  + +M+  LS  E++Y   +  L   H K + L  LP   Q + K      D       P LD  VFC VR +VG I + ED   + +++  N++  +RY  V++L+ S
Sbjct:   18 DDSSPSTSSNIVEKLIRAVFNEKNAPEILPYQADMVKDLQEKVEKQEDLLAEDLDREPAQELRKIVFSLELKRIRYLLRLYFRTRLRKLEATAAHVLGDEEMMERLSPLEQLYTQDFFVLAGTHLKGACLDRLPLDFQSVVKTHEGLADGNDMVLVPPLDAHVFCSVREDVGSIPLEED---NVLDMKANELFIIRYSLVSKLVMS 220          
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A835LGG3_9MAGN (DNA replication complex GINS protein SLD5 n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LGG3_9MAGN)

HSP 1 Score: 105 bits (261), Expect = 6.470e-24
Identity = 70/210 (33.33%), Postives = 114/210 (54.29%), Query Frame = 0
Query:   42 DDPSQAGLNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAIPLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDG-SVEHDS---GPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVEL 247
            DDPS A     ++ M    RNE+ SPEIL +    ++ IR  ++     V+E E      PL   L ++++DR  + LR Y R+R+ KIE+ +++I K  DM N LS+ E+ +A    + +E H  +S LS LP   Q + K   S E D     P LD FVFC+ + ++G   + E    + ++L  +D+  +RYKSV  L+++  +++
Sbjct:   17 DDPSIATTPNDVEPMKRAWRNEKASPEILEFQSDLVDRIRGQIELNERNVEEFEQ-NGTDPLTISLYQMDLDRSQFLLRSYLRIRLYKIEKYMIYISKTTDMWNRLSEQEQKFAKRCIDDMEKHLTQSVLSRLPFGYQSMMKQSISSEEDDLVPEPQLDTFVFCKSKGSLGAFQLDESG-DEIVDLVADDLYVLRYKSVKPLIENGQIDI 224          
BLAST of Gcaud7535.t1 vs. uniprot
Match: F0WP87_9STRA (DNA replication complex GINS protein SLD5 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WP87_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.380e-23
Identity = 62/204 (30.39%), Postives = 114/204 (55.88%), Query Frame = 0
Query:   49 LNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAIPLE----SQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSGPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            +NE I+ M  L RNE  +P+IL Y +  +  +   +K Q   +D   D    +  E    ++L ++EIDR+ Y L  Y R R++KIE+    I K    L+ LS+ E IYA  + +L+  H   + LS +P++ +V++ DG       P+LD+FVFC+ +  +G++   +D  ++ + + + D   +RY+S++  ++++ V L+
Sbjct:   10 INEDIEKMMTLWRNELNAPDILNYNNDLVVALLEQIKNQQGYIDSIGDDRGNLTEERSFTNKLYQMEIDRLRYVLASYLRTRLQKIERYSKHIVKTTVYLDRLSEKECIYAQQHASLIATHLNNTALSRIPEEHRVLDSDGMALE---PNLDKFVFCQSQEELGQVRC-DDRGAEFVQVREKDRHVIRYRSISNFVETDQVFLI 209          
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A2P6NQT8_9EUKA (DNA replication complex GINS protein SLD5 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQT8_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 6.390e-23
Identity = 64/210 (30.48%), Postives = 113/210 (53.81%), Query Frame = 0
Query:   42 DDPSQAGLNEAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVD---EEEDIEDAIPLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSGPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            D   + G    +  +   A NE+ +PE+L Y ++ ++ I+  ++ Q   ++    E   E+   L +  +++EIDRI+Y LR Y R RI KIE++      +      LS +E+ +A  Y +L++ H+++SFL  LP ++   E+D      +   LD +V CRV   +G+I + +D   +   LN+ND++ +RY+ +  LL    VELL
Sbjct:   34 DAEDEGGKGSLVQKIKTAALNERSAPELLEYKEELVDQIKQSLRSQKQRINGPFTEFQFEEK--LFTSFQQMEIDRISYLLRSYLRSRIVKIEKHHSKFVSDETYHQRLSPSEQKFAQSYTDLIKSHYRESFLQSLPDRVNSGEEDAMTARIN---LDEYVICRVLERIGQIEL-DDQTDEFAELNENDVVLIRYRPIQHLLVEGKVELL 237          
BLAST of Gcaud7535.t1 vs. uniprot
Match: A0A152A3S8_9MYCE (DNA replication complex GINS protein SLD5 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A3S8_9MYCE)

HSP 1 Score: 99.0 bits (245), Expect = 7.810e-22
Identity = 55/188 (29.26%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   62 NEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDAI-PLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDAEKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSGPSLDRFVFCRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL 248
            NE+FSP++L +  + +  I   ++++   + E  DI+++     + L  +EI+R+ Y ++ Y ++R+KKIE+    I ++ D +  LS  E  Y   + NLLE+HFKK+FL  LP     + K+   E+ + P LD ++FC+ + N+G   + ++   + +    N I  +RYK +   ++S  ++L+
Sbjct:   21 NEKFSPDLLNFEGELVAFIMEQIEEKEKNISE--DIKNSSHQFTANLYEMEIERLKYIIKCYLKIRLKKIEKFYAHILQDDDEILKLSPNELKYCKSFSNLLENHFKKTFLDALPD----VYKENEKENATKPQLDSYIFCKPKENIGDYQIDDE---ETVEFKINTIYFLRYKPIKFFVESGKIDLI 199          
The following BLAST results are available for this feature:
BLAST of Gcaud7535.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXJ8_9FLOR1.980e-10565.32DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
R7Q402_CHOCR4.230e-8053.85DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A0L0D2U3_THETB4.560e-2630.60DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A024GPQ5_9STRA2.100e-2530.19DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A5J4Z3G8_PORPP8.590e-2531.58DNA replication complex GINS protein sld5 n=1 Tax=... [more]
A0A250XBE6_9CHLO3.370e-2432.52DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A835LGG3_9MAGN6.470e-2433.33DNA replication complex GINS protein SLD5 n=2 Tax=... [more]
F0WP87_9STRA3.380e-2330.39DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A2P6NQT8_9EUKA6.390e-2330.48DNA replication complex GINS protein SLD5 n=1 Tax=... [more]
A0A152A3S8_9MYCE7.810e-2229.26DNA replication complex GINS protein SLD5 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1030coord: 38..237
e-value: 4.0E-46
score: 159.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..51
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 195..248
IPR031633DNA replication complex GINS protein SLD5, C-terminalPFAMPF16922SLD5_Ccoord: 193..248
e-value: 2.7E-13
score: 49.9
IPR008591GINS complex subunit Sld5PIRSFPIRSF007764GINS_Sld5coord: 24..248
e-value: 1.7E-37
score: 127.3
IPR008591GINS complex subunit Sld5PANTHERPTHR21206SLD5 PROTEINcoord: 36..248
IPR038749GINS complex protein Sld5, alpha-helical domainCDDcd11711GINS_A_Sld5coord: 52..171
e-value: 1.03154E-27
score: 100.763
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 50..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_51_length_65224_cov_4.623524contigNODE_51_length_65224_cov_4.623524:43274..44020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7535.t1Gcaud7535.t1Gracilaria caudata M_176_S67 malemRNANODE_51_length_65224_cov_4.623524 43274..44020 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7535.t1 ID=Gcaud7535.t1|Name=Gcaud7535.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=249bp
MSSFSDHGDEIPRFSFGSMALSEEQSNRGRTHSRLPNASDGDDPSQAGLN
EAIDMMGMLARNEQFSPEILPYADQTIEVIRALVKQQSDLVDEEEDIEDA
IPLESQLKRLEIDRINYTLRLYFRVRIKKIEQNILFIFKNADMLNHLSDA
EKIYASGYKNLLEDHFKKSFLSMLPQKIQVIEKDGSVEHDSGPSLDRFVF
CRVRSNVGRIAVGEDAMSDAINLNQNDILCVRYKSVAELLQSEDVELL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031633SLD5_C
IPR008591GINS_Sld5
IPR038749Sld5_GINS_A
IPR036224GINS_bundle-like_dom_sf