Gcaud7523.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7523.t1
Unique NameGcaud7523.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length283
Homology
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A2V3IXJ7_9FLOR (Thiamine-phosphate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ7_9FLOR)

HSP 1 Score: 240 bits (613), Expect = 3.120e-76
Identity = 111/215 (51.63%), Postives = 161/215 (74.88%), Query Frame = 0
Query:   66 PSVIFITPDDICQNTRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIGESPMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASLLDLCKTAYEAKR 280
            PSV+F+TPDD  Q+   A+ LV +VL+GG+  VQ+RD+ +S  +++            A  L +NG++P +V+ ID  LG+HIKERDI K L +A E++P+ ++IGCAVHS  +AKQA+D+H PSY QVGTMY+T+SHPGK+PEGP L++++ +++G+SP+LIG+GGI+E NL +V+EHGADGIAVI+ L+ A DP   S SL+++CK AY+  R
Sbjct:   10 PSVVFVTPDDFSQDLTKALALVHSVLAGGVSLVQIRDQKASSSEIQDIVEGLLRNGIPADKLTVNGMSPTDVMTIDLGLGVHIKERDIYKYLLEAKEVVPTDNIIGCAVHSAASAKQALDVHRPSYFQVGTMYATKSHPGKLPEGPSLIREVHNIVGKSPVLIGIGGIDESNLHNVLEHGADGIAVISLLAAAEDPCATSTSLVNMCKKAYKPDR 224          
BLAST of Gcaud7523.t1 vs. uniprot
Match: R7QLI4_CHOCR (TMP-TENI domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLI4_CHOCR)

HSP 1 Score: 179 bits (455), Expect = 6.840e-52
Identity = 100/234 (42.74%), Postives = 141/234 (60.26%), Query Frame = 0
Query:   44 PCKCHSTLHTSEPPKYAKTLSKPSVIFITPDDICQNTRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIGESPMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASLLDLCKTAYE 277
            P KC +  H  E    A TL KP+++F+TP+  CQ+   A+  V+ V+S G   VQ+RD+ S+  ++               AL++NG+ P E  A+   +GIHI+E DI +    A      G VIGC+VHS  AA+ A +    +YLQVGTM++T SHPGKIPEGP LL+ IR  +G S  LIGVGGI + NL +V ++GA G+AVI+ +S A D RR ++ L  LC+  +E
Sbjct:   25 PQKCCTRFHAHEVKNRA-TLVKPALLFVTPNGFCQDYAKAITRVQEVISAGASLVQIRDRGSTADEILKLTDRLLRAGVDPTALSLNGVHPEEARALTPAVGIHIREADIDEYSHAAAINASLGVVIGCSVHSVAAAELACEKLALTYLQVGTMFNTNSHPGKIPEGPALLRAIRERLGPSETLIGVGGIQKHNLHTVFKNGASGVAVISSISAAHDVRRATSELHRLCRDNFE 257          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.010e-30
Identity = 88/227 (38.77%), Postives = 124/227 (54.63%), Query Frame = 0
Query:   64 SKPSVIFITPD-DICQNTRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAH--ALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIGESP----------MLIGVGGINEDNLASVIEHGADGIAVITQLSNA--SDPRRESASLLDLCKTA 275
            S P +  ITPD    Q +    + ++A +SGG+  VQ+RD  SS  + K            A    + +NG   A  LA  +H G+H+ ER    LLP+      + +V+GC+VHS  AA  A  +    YLQVGTM++TQ+HPGK+PEGP LL  IR+ + ++           +L+GVGGINE N A VI+ G DG+A I  L  A  SDPR  + +LL   ++A
Sbjct:   40 SGPVLELITPDGSAAQPSTHLAQKIRAAVSGGVRLVQIRDTTSSA-ESKHALATQLLLDLAAEPCCIVLNGGVDA-ALACGAH-GVHLPER----LLPEVTRAREALAVVGCSVHSVEAAVAAARLGA-DYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRAVAQALLAALQSA 258          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A800KQ30_9CHLR (Thiamine-phosphate synthase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A800KQ30_9CHLR)

HSP 1 Score: 100 bits (249), Expect = 1.010e-21
Identity = 73/207 (35.27%), Postives = 115/207 (55.56%), Query Frame = 0
Query:   63 LSKPSVIFITPDD-ICQNTRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIGESPMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASL 268
            L +P +  +T    +  +T+  V+ V   + GG+  VQVR+K     ++                L +N  A   ++A  +H G+ + E   G  +  A E++ +G +IG +VHS  AA QA D     +L VGTM++++SHPGK P GPGL+++I S   + P LIG+GGI  +N + VI+ GA G+AVI+ +  ASDPR  ++ L
Sbjct:   18 LPRPYLCLVTDRSAVGDDTKEMVQRVTQAVLGGVDLVQVREKDLPAGELLQLTQSLLESVGGRAKLIVNDRADIALVA-RAH-GVQLGEE--GLPVAAAREIIGNGGLIGRSVHSVAAATQAQD-DGADFLIVGTMFASRSHPGKTPTGPGLMQEILSKC-KLP-LIGIGGIIPENASVVIQAGASGVAVISHILAASDPRAAASEL 217          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 4.100e-21
Identity = 71/221 (32.13%), Postives = 114/221 (51.58%), Query Frame = 0
Query:   60 AKTLSKPSVIFITPDDICQN----TRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGS---VIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIG----ESPMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASLL 269
            A  L+ P +  ITPD    +    T + VK ++  ++GG+  VQ+RD + S  + K              AL +    P    A  +  G+H+ ER + +L+     L   G    ++GC+VHS  AA +A  +    Y+QVGTM++TQSHPGK PEG G+L  +R  +     +  +++GVGGI+  N   V+  G DG+A I  L ++SD   ++  ++
Sbjct:   97 ATPLAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRD-YKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGAD-GVHLPERMMDRLVG----LRGQGEWPRIVGCSVHSVAAAVEAARLGA-DYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIV 310          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK)

HSP 1 Score: 100 bits (249), Expect = 4.670e-21
Identity = 67/218 (30.73%), Postives = 113/218 (51.83%), Query Frame = 0
Query:   66 PSVIFITPDDIC------QNTRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHAL-AINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIR-SVIGES-------------PMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPR 262
            P +  ITP+ +C      +  R  +  +   + GG+  VQ+RDK ++  ++             + A+  +NG    +V       G+H+ E  +   +        +G V+GC+VHS+ AA +A+++ +  Y+ VGTM+ T SHPGK+PEGP  LKKI+  ++  S             P++ GVGGI+ DN   V+++G DG+A+I+ L  A  P+
Sbjct:    4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNG--DLDVAIACKADGVHLPEAQVQDFINSYKNKKFNG-VLGCSVHSSEAALRAMEV-KADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLCFADRPK 217          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A5N8YMW7_9CHLR (Thiamine-phosphate synthase n=1 Tax=SAR202 cluster bacterium AD-802-F09_MRT_200m TaxID=2587839 RepID=A0A5N8YMW7_9CHLR)

HSP 1 Score: 96.7 bits (239), Expect = 2.160e-20
Identity = 72/208 (34.62%), Postives = 109/208 (52.40%), Query Frame = 0
Query:   70 FITPDDICQNTRAA------VKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIGESPMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASLLDL 271
            F+    +C  T AA      V+ V   + GG+  VQ+RDK     Q+                L +N  A    LA  +H G+ + E  +   +  A  ++    +IG +VHST AA QA ++    +L VGTMY+++SHPG++P GPGL+++I S     P LIG+GG+  +N A +IE GA G AVIT +  + DPR  +  L ++
Sbjct:    4 FLPEPCLCLVTDAALARDELVERVSKAVEGGVDLVQLRDKSLPGGQLMDLTCAVLEAMGGRAKLVVNERADV-ALAAGAH-GVQLGEEGLPAAV--ARRILGDRLLIGRSVHSTEAAVQA-ELDGSDFLVVGTMYASRSHPGELPAGPGLMREI-SAKCHLP-LIGIGGVAPENAAELIEAGASGAAVITNILASEDPRAAAERLKEI 204          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A8J2X006_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.660e-20
Identity = 70/212 (33.02%), Postives = 108/212 (50.94%), Query Frame = 0
Query:   63 LSKPSVIFITPDDICQNTRAA--VKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAH-ALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIGES---PMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASL 268
            L +  ++F+TP       R A   ++ +A   GG   VQ+RD  +S  +++               ++ ING+              H+ ER       +A    P+G  +GC+ HS  A   A  +    Y+Q+GTM++TQ+HPGKIPEGPGL  + R  + E    P+LIGVGG++  N A +IE G DG+AVI  +S+A DP   + ++
Sbjct:   51 LPRRPLVFVTPPGWAAADRRADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVINGVE-------------HLPERKW-----RAATERPNGP-LGCSAHSVEAVLAAAALGA-DYVQLGTMFATQTHPGKIPEGPGLATECRRALDEREAPPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAI 242          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A485LSF5_9STRA (Aste57867_25148 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSF5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.320e-19
Identity = 78/225 (34.67%), Postives = 119/225 (52.89%), Query Frame = 0
Query:   68 VIFITPDDICQNTRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHALA-------INGIAPAEVLAID----SHL-GIHIKERDIGKLL-PKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYSTQSHPGK-IPEGPGLLKKIRSVIGESPMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASLLDLCKTAYEA 278
            V+ ++P DI + T     L +A+ S  I  VQ+R   ++P                   +        +N  AP+ ++  D    +HL G H  ER +  LL P A +   SGS+ G +VHS  AA +A+     SY+QVGTM+ T SHP K + EGPGL++++R +   S  LIG+GGI E N   V++ GADG+AVI  + ++++P R +  L    +TA +A
Sbjct:   13 VLVVSPCDILRGTT----LKEALSSHAIDLVQLRHNPTTPFSNDNFVEAMAALSALGPTMGDRPPHYVVN--APSGLVHPDDSPATHLDGWHYPERHLDNLLQPTARQ---SGSIFGVSVHSVAAANKAVAAGA-SYVQVGTMFPTASHPEKSVIEGPGLVREVRRM-HPSVRLIGIGGITEGNCVEVLQAGADGVAVIRAILDSTEPARAAQQL----RTALDA 222          
BLAST of Gcaud7523.t1 vs. uniprot
Match: A0A6A0JUE5_9CHLR (Thiamine phosphate synthase n=2 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A6A0JUE5_9CHLR)

HSP 1 Score: 94.0 bits (232), Expect = 1.810e-19
Identity = 65/212 (30.66%), Postives = 101/212 (47.64%), Query Frame = 0
Query:   61 KTLSKPSVIFITPDDICQNTRAAVKLVKAVLSGGIPFVQVRDKHSSPLQVKXXXXXXXXXXXXAHALAINGIAPAEVLAIDSHLGIHIKERDIGKLLPKANELMPSGSVIGCAVHSTLAA----KQAIDIHEPSYLQVGTMYSTQSHPGKIPEGPGLLKKIRSVIGESPMLIGVGGINEDNLASVIEHGADGIAVITQLSNASDPRRESASL 268
            K L  P +  +T     Q       LV AV  GG   +Q+R+K      +                + +NG      +A D  +G+H+ E  +G L+     ++ S +++G +VHS  +A    KQ  D     +L  GTM+ST SHP KIPEGP L++ ++     S  ++G+GGI  DN   V++ GA G+AVI  +  + DP   +  L
Sbjct:    5 KLLRLPCLCVVTDSQRYQVDTLVDSLVNAV-KGGADMIQIREKSLEDESLSDLIRNVVRSVESTTHILVNGNPK---IACDEGVGVHLPE--MGDLVSNVRAIIGSNALVGKSVHSVYSAIAAEKQGAD-----FLIAGTMFSTNSHPDKIPEGPDLIRAMKDSGEVSIPILGIGGITPDNARIVLDAGASGVAVIDSVLGSPDPSEAARRL 205          
The following BLAST results are available for this feature:
BLAST of Gcaud7523.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXJ7_9FLOR3.120e-7651.63Thiamine-phosphate synthase n=1 Tax=Gracilariopsis... [more]
R7QLI4_CHOCR6.840e-5242.74TMP-TENI domain-containing protein n=1 Tax=Chondru... [more]
A0A836CN05_9STRA5.010e-3038.77Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribo... [more]
A0A800KQ30_9CHLR1.010e-2135.27Thiamine-phosphate synthase n=1 Tax=Dehalococcoidi... [more]
A0A6H5L486_9PHAE4.100e-2132.13TMP-TENI domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S3XPQ6_HETAK4.670e-2130.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5N8YMW7_9CHLR2.160e-2034.62Thiamine-phosphate synthase n=1 Tax=SAR202 cluster... [more]
A0A8J2X006_9STRA2.660e-2033.02Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A485LSF5_9STRA1.320e-1934.67Aste57867_25148 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A0JUE5_9CHLR1.810e-1930.66Thiamine phosphate synthase n=2 Tax=SAR202 cluster... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022998Thiamine phosphate synthase/TenIPFAMPF02581TMP-TENIcoord: 69..254
e-value: 5.1E-26
score: 91.1
IPR022998Thiamine phosphate synthase/TenICDDcd00564TMP_TenIcoord: 68..270
e-value: 2.05861E-34
score: 121.471
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 59..271
e-value: 3.4E-35
score: 123.2
NoneNo IPR availablePANTHERPTHR20857THIAMINE-PHOSPHATE PYROPHOSPHORYLASEcoord: 61..275
IPR036206Thiamin phosphate synthase superfamilySUPERFAMILY51391Thiamin phosphate synthasecoord: 60..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_51_length_65224_cov_4.623524contigNODE_51_length_65224_cov_4.623524:19320..20168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7523.t1Gcaud7523.t1Gracilaria caudata M_176_S67 malemRNANODE_51_length_65224_cov_4.623524 19320..20168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7523.t1 ID=Gcaud7523.t1|Name=Gcaud7523.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=283bp
MLFAGRARPHPQISSCKGIYSSTTCLSFASPWLDTLTVFRGTEPCKCHST
LHTSEPPKYAKTLSKPSVIFITPDDICQNTRAAVKLVKAVLSGGIPFVQV
RDKHSSPLQVKRLVQALLTGGVPAHALAINGIAPAEVLAIDSHLGIHIKE
RDIGKLLPKANELMPSGSVIGCAVHSTLAAKQAIDIHEPSYLQVGTMYST
QSHPGKIPEGPGLLKKIRSVIGESPMLIGVGGINEDNLASVIEHGADGIA
VITQLSNASDPRRESASLLDLCKTAYEAKRRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022998ThiamineP_synth_TenI
IPR013785Aldolase_TIM
IPR036206ThiamineP_synth_sf