Gcaud7514.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7514.t1
Unique NameGcaud7514.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length285
Homology
[Close]
BLAST of Gcaud7514.t1 vs. uniprot
Match: A0A2V3ID32_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID32_9FLOR)

HSP 1 Score: 210 bits (534), Expect = 1.680e-63
Identity = 112/273 (41.03%), Postives = 156/273 (57.14%), Query Frame = 0 
Query:   15 SSASFLAPRQHLPPGLLEYLLQPT--GQGDSFLTSRSNDVMRTITKGDDKPTCDLLPVDRTIALGATFEGTEVEAGYIDIRNDFFRFALGWDERRIEQSRVHALKHFKATFGLDASSLQYDSATGIYGTDRFGYGVLVANLTVIRTADSDELIPCTNTTGVLGGWLLYGENITYPMVPGVPASATVPGNSGVYVFYLVAQPGTRTLTKIELRATKPSACVLNSCPVTADAQIIDNI-DNMYTGNLDGVDTQEEVAPGVIREYHHWVLTFPGRN 284
            +SAS L P ++L   +L+     +   +   F  +    V R   K      C LLP+ RTI LG  FEG   +A  +D    FFR +LGW   RIE+SR  A++HFK+ FGLD SS   ++ TGIY      Y   V    +++ ADSD L PCTN + +LGGWLL+G +ITYPMVPGV     VPG S ++  Y+V QPG++  T   L+ T+PSAC  N C V A   ++D+   + Y GNL+G+     V PGV++ +  +VLT+P R+
Sbjct:   14 TSASLLHPSRNLNTRVLKSYRHHSLASKAFGFKPAELFGVSRITNK-----KCSLLPITRTIVLGEEFEGNPEDAVVVDKSFAFFRLSLGWSADRIERSRRAAVEHFKSKFGLDLSSAVLNTTTGIYEEHGVFYAPFVFTNKLVKIADSDTLTPCTNVSAILGGWLLFGTDITYPMVPGVKGPVKVPGESALFFLYIVFQPGSKFSTAFVLKGTRPSACTFNVCQVVATTDLVDDYYGSSYPGNLEGIAVDTFVKPGVVKTFGSYVLTWPKRD 281
The following BLAST results are available for this feature:
BLAST of Gcaud7514.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ID32_9FLOR1.680e-6341.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..284
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_844_length_17103_cov_5.002704contigNODE_844_length_17103_cov_5.002704:2076..2930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7514.t1Gcaud7514.t1Gracilaria caudata M_176_S67 malemRNANODE_844_length_17103_cov_5.002704 2076..2930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7514.t1 ID=Gcaud7514.t1|Name=Gcaud7514.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=285bp
MVQFMLIVFLVVGWSSASFLAPRQHLPPGLLEYLLQPTGQGDSFLTSRSN
DVMRTITKGDDKPTCDLLPVDRTIALGATFEGTEVEAGYIDIRNDFFRFA
LGWDERRIEQSRVHALKHFKATFGLDASSLQYDSATGIYGTDRFGYGVLV
ANLTVIRTADSDELIPCTNTTGVLGGWLLYGENITYPMVPGVPASATVPG
NSGVYVFYLVAQPGTRTLTKIELRATKPSACVLNSCPVTADAQIIDNIDN
MYTGNLDGVDTQEEVAPGVIREYHHWVLTFPGRN*
back to top