Gcaud7510.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7510.t1
Unique Name	Gcaud7510.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	178

Homology

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BLAST of Gcaud7510.t1 vs. uniprot
Match: A0A2V3J2B5_9FLOR (Mannose-P-dolichol utilization defect 1 protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2B5_9FLOR)

HSP 1 Score: 246 bits (629), Expect = 1.750e-79
Identity = 131/176 (74.43%), Postives = 144/176 (81.82%), Query Frame = 0

Query:    1 MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPAFALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWYSRMLSKVTKTATTPEPHR 176
            MY LET+GTTFSAVYCAR  IPFSTYGE VFIM+QN +IL+LIVFFERLPR PA   AL+YV  L+CLYS +VPM + T LQVCSIPILNLAR+PQI+LN R KSTGELAPITLGLQLLGN ARIFTTIAQVRDPLMLT IAV TCFNT LFAQW  YSR+L   T+    P P +
Sbjct:  113 MYILETVGTTFSAVYCARRHIPFSTYGESVFIMVQNALILMLIVFFERLPRVPAVCSALVYVLCLLCLYSSLVPMRIITVLQVCSIPILNLARVPQILLNLRSKSTGELAPITLGLQLLGNVARIFTTIAQVRDPLMLTAIAVATCFNTTLFAQWFKYSRVLP--TRVNPIPNPSK 286

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BLAST of Gcaud7510.t1 vs. uniprot
Match: A0A7S2ZV02_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZV02_9RHOD)

HSP 1 Score: 161 bits (408), Expect = 2.160e-46
Identity = 83/156 (53.21%), Postives = 107/156 (68.59%), Query Frame = 0

Query:    3 SLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPAFALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWY 158
            SLET+GT+ S VY  R R PFSTYGE +FI +QN  I+ L++FFER P  P     LLY+  L+ L  P   M++  FL VC+ PI+ ++++PQ++LN++ KSTG+LAPITLGLQLLGN ARIFTTI QVRDP++  G       N  LF QW  Y
Sbjct:   98 SLETLGTSLSCVYSTRNRFPFSTYGESLFIPVQNLAIMALVIFFERAPAKPWILWLLLYIICLVTLMIPGTSMTIVAFLNVCATPIMYVSKIPQLLLNFQTKSTGQLAPITLGLQLLGNVARIFTTIVQVRDPIVFLGFISAFFMNGALFLQWWIY 253

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BLAST of Gcaud7510.t1 vs. uniprot
Match: A0A1X6NJP7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJP7_PORUM)

HSP 1 Score: 132 bits (333), Expect = 4.810e-36
Identity = 76/161 (47.20%), Postives = 101/161 (62.73%), Query Frame = 0

Query:    1 MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPAFALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNL-ARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWYSR 160
            MY  E+ G   S VYCAR   PFST+GEGVFI+ QN V+L L+  +    R    A A +  AGL    +  V +     LQV +IP++N+ ARLPQ+ LNWRRKS GE + +TL LQ  GN AR+FTT+ QVRD ++L G   +T  N +L  QW+WY++
Sbjct:    1 MYLTESAGMLLSTVYCARRAFPFSTWGEGVFILAQNAVLLGLLWRYRAGRRRRDAAAAAVGAAGLAAALAVGVDVGTLGALQVAAIPVVNVGARLPQMALNWRRKSVGEQSIVTLALQWAGNLARVFTTLVQVRDGVVLGGSIASTVVNGVLVGQWLWYTK 161

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BLAST of Gcaud7510.t1 vs. uniprot
Match: K8YU69_NANGC (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YU69_NANGC)

HSP 1 Score: 132 bits (331), Expect = 5.990e-35
Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 0

Query:    1 MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPAFALALLYVAGLICLY--SPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWY 158
            MY LETIG   S  +  R   PFSTYGE VFI++QN VI+  I  +   P  P  AL+LL +A L   Y  SP+ PM + + LQ  SIP+LN +R+PQ++LN+R KSTGELAP TL LQ +GN ARIFTT+ Q+++ L L        FN  L AQ+  Y
Sbjct:   85 MYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLL-LASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 243

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BLAST of Gcaud7510.t1 vs. uniprot
Match: W7TT95_9STRA (Cystinosin/ERS1p repeat containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT95_9STRA)

HSP 1 Score: 132 bits (331), Expect = 7.690e-34
Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 0

Query:    1 MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPAFALALLYVAGLICLY--SPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWY 158
            MY LETIG   S  +  R   PFSTYGE VFI++QN VI+  I  +   P  P  AL+LL +A L   Y  SP+ PM + + LQ  SIP+LN +R+PQ++LN+R KSTGELAP TL LQ +GN ARIFTT+ Q+++ L L        FN  L AQ+  Y
Sbjct:  202 MYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLL-LASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLY 360

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BLAST of Gcaud7510.t1 vs. uniprot
Match: M2X213_GALSU (Lysosomal cysteine transporter, LCT family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X213_GALSU)

HSP 1 Score: 121 bits (303), Expect = 1.540e-30
Identity = 75/179 (41.90%), Postives = 108/179 (60.34%), Query Frame = 0

Query:    1 MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVI-LILIVFFERLP---RAPAFALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWYSRMLSKVTKTATTPEPH 175
            MY LE+IG  FS  YC + + P+ T+ E + I +QN +I L L  + ER     R   +AL  L  A L+C+  PI  + +   LQVCS P++N++++PQI+ N R +STGEL+PITL  QL GN AR+FTTI Q+R+   LT I+++   N +L  Q   Y R    +TK+   P+ H
Sbjct:   99 MYVLESIGIYFSLCYCIQAKFPWETFAESICIFVQNIIITLFLYKYTERKDGRNRNLVYALIPLMGASLLCIRLPIHWLQL---LQVCSSPLMNISKIPQILRNERNQSTGELSPITLSFQLAGNVARVFTTIVQLRNRWFLTSISISLILNAILGLQ---YIRYRFSITKSTYFPDDH 271

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BLAST of Gcaud7510.t1 vs. uniprot
Match: A0A5J4Z522_PORPP (Mannose-P-dolichol utilization defect 1 protein-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z522_PORPP)

HSP 1 Score: 112 bits (281), Expect = 4.690e-27
Identity = 70/173 (40.46%), Postives = 103/173 (59.54%), Query Frame = 0

Query:    5 ETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPAFALA-LLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWYSRMLSKVTKTATTPEPHR 176
            ET+G  FS+VY  R   PF TYGE +FI +QN +IL L+  +    +    ALA +L      CL +P+VP ++T  LQ+ SIP+ NL+RLPQI +++R KSTG+L+  T+ L + GN AR+FTT  QV+D  +L         N+++  Q + Y++M     K  +  EP R
Sbjct:  133 ETLGMLFSSVYNVRSGFPFETYGELIFITLQNILILWLMRAYAPPEKKRRAALAPILIGTSFPCLMAPVVPFALTRTLQLLSIPLGNLSRLPQIWMSFRSKSTGQLSVATVALTVAGNVARLFTTAVQVKDAFVLMSSLCAFALNSVVLTQCILYNKM-----KPGSDKEPAR 300

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BLAST of Gcaud7510.t1 vs. uniprot
Match: A0A1U7LLR6_NEOID (Mannose-P-dolichol utilization defect 1 protein (Fragment) n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LLR6_NEOID)

HSP 1 Score: 107 bits (266), Expect = 2.370e-25
Identity = 66/157 (42.04%), Postives = 93/157 (59.24%), Query Frame = 0

Query:    2 YSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPAFALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWY 158
            Y LET  T  S VY AR    FSTYGEG+FI +QN +I +LI++F R  RA    L  L + G   L++     S    LQ  +IP+  L+++PQI  N+++KSTG+L+   +   LLG+ AR+FTTI +V DPL+L G  +    N +L  Q + Y
Sbjct:   74 YILETAATIISLVYSARQGFSFSTYGEGLFISIQNILITLLIMYFAR-RRAALVGLIGLIIVGCYSLFTT--SSSTLAILQALTIPLNLLSKVPQIASNFKKKSTGQLSAFAVFNYLLGSLARVFTTITEVSDPLVLWGYVLAVVLNAVLVIQMVIY 227

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BLAST of Gcaud7510.t1 vs. uniprot
Match: R9P406_PSEHS (Uncharacterized protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9P406_PSEHS)

HSP 1 Score: 108 bits (269), Expect = 1.500e-24
Identity = 63/171 (36.84%), Postives = 96/171 (56.14%), Query Frame = 0

Query:    1 MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLPRAPA-------------FALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWY 158
            MY+LE +  T S  Y  R R+PFSTYGE + + +QN +IL+L++ +   P A                A AL+ +  L      ++P S  TFLQ C+IPI   +++PQ+   ++ KS G+L+ I +  QLLG  AR+FTT+ +  D L+L G  + T FN  + AQ ++Y
Sbjct:  205 MYTLEVVAYTISLAYAVRSRLPFSTYGENLSLTLQNMIILLLVIAYT--PNAKTGRVDPSARSNSITVAAALMGIGSLALATPSVIPASTLTFLQACTIPISLASKVPQMAELYKDKSRGQLSSIVVFAQLLGTIARVFTTMTETDDKLLLYGFGLATLFNAAIAAQVVYY 373

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BLAST of Gcaud7510.t1 vs. uniprot
Match: V5EWJ6_KALBG (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Kalmanozyma brasiliensis (strain GHG001) TaxID=1365824 RepID=V5EWJ6_KALBG)

HSP 1 Score: 105 bits (263), Expect = 2.110e-24
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 0

Query:    1 MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFE------RL-PRAPA----FALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILNWRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTMLFAQWMWY 158
            MY+LE +    S  Y  R R+PFSTYGE   + +QN +IL+L++ +       R+ P A +    FA AL+ +  L      I+P    TFLQ C+IPI   +++PQ+   +R KS G+L+   +  QLLG  ARIFTT+ +  D L+L G  +   FN ++ AQ M+Y
Sbjct:   84 MYTLEVMAYAISLAYAVRSRLPFSTYGENASLTVQNMIILLLVIAYTADGKTGRVDPSAHSTKITFAAALMGIGSLALATPSIIPAQTLTFLQACTIPISLASKVPQMAELYREKSRGQLSSFVVFAQLLGTIARIFTTMTETDDKLLLWGFGLAGVFNAVIAAQVMYY 252

The following BLAST results are available for this feature:

BLAST of Gcaud7510.t1 vs. uniprot

BLAST of Gcaud7510.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3J2B5_9FLOR	1.750e-79	74.43	Mannose-P-dolichol utilization defect 1 protein n=...	[more]
A0A7S2ZV02_9RHOD	2.160e-46	53.21	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A1X6NJP7_PORUM	4.810e-36	47.20	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
K8YU69_NANGC	5.990e-35	49.38	Mannose-P-dolichol utilization defect 1 protein ho...	[more]
W7TT95_9STRA	7.690e-34	49.38	Cystinosin/ERS1p repeat containing protein n=2 Tax...	[more]
M2X213_GALSU	1.540e-30	41.90	Lysosomal cysteine transporter, LCT family n=1 Tax...	[more]
A0A5J4Z522_PORPP	4.690e-27	40.46	Mannose-P-dolichol utilization defect 1 protein-li...	[more]
A0A1U7LLR6_NEOID	2.370e-25	42.04	Mannose-P-dolichol utilization defect 1 protein (F...	[more]
R9P406_PSEHS	1.500e-24	36.84	Uncharacterized protein n=1 Tax=Pseudozyma hubeien...	[more]
V5EWJ6_KALBG	2.110e-24	38.46	Mannose-P-dolichol utilization defect 1 protein ho...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006603	PQ-loop repeat	SMART	SM00679	ctns	coord: 91..122 e-value: 1.8E-4 score: 30.8
IPR006603	PQ-loop repeat	PFAM	PF04193	PQ-loop	coord: 79..135 e-value: 4.0E-14 score: 52.1
None	No IPR available	GENE3D	1.20.1280.290		coord: 75..169 e-value: 2.8E-9 score: 39.0
None	No IPR available	PANTHER	PTHR12226:SF2	MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN	coord: 2..163
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 111..130
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 136..158
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 100..110
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 159..177
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 131..135
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 47..52
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 79..99
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..46
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..73
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 74..78
None	No IPR available	TMHMM	TMhelix		coord: 24..46
None	No IPR available	TMHMM	TMhelix		coord: 136..158
None	No IPR available	TMHMM	TMhelix		coord: 53..75
IPR016817	Mannose-P-dolichol utilization defect 1 protein	PANTHER	PTHR12226	MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED	coord: 2..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_893_length_16430_cov_4.124426	contig	NODE_893_length_16430_cov_4.124426:11825..12358 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7510.t1	Gcaud7510.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_893_length_16430_cov_4.124426 11825..12358 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7510.t1 ID=Gcaud7510.t1|Name=Gcaud7510.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=178bp
MYSLETIGTTFSAVYCARLRIPFSTYGEGVFIMMQNFVILILIVFFERLP
RAPAFALALLYVAGLICLYSPIVPMSVTTFLQVCSIPILNLARLPQIILN
WRRKSTGELAPITLGLQLLGNCARIFTTIAQVRDPLMLTGIAVNTCFNTM
LFAQWMWYSRMLSKVTKTATTPEPHRV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006603	PQ-loop_rpt
IPR016817	MannP-dilichol_defect-1