Gcaud7501.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7501.t1
Unique NameGcaud7501.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length268
Homology
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BLAST of Gcaud7501.t1 vs. uniprot
Match: A0A2V3IH35_9FLOR (Eukaryotic translation initiation factor isoform 4G-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH35_9FLOR)

HSP 1 Score: 318 bits (814), Expect = 3.160e-101
Identity = 155/265 (58.49%), Postives = 206/265 (77.74%), Query Frame = 0 
Query:    1 MGATAATKKLNQGDAEYYGLGFLAKDMQAIDDPKRRANLAIFTFAELYQRLNASVPDHEERANVVRQVANRIHVDLAADMSAWNPMRGLNKLSDMLNNNKVAFLVPYLDTENRVKELISEKECSEDVEKLLRSTSEVANTNLMRMIVRVGFDSFFMSSTDNVVELFKKRIGAPVVSCFGSLTPEVQFSVLLATQVFIGRSLSFLPPLSNTTEKHGDVAFKALLESGLVENETFTRWSQDKAESEKVACKKEMIEQTRLFFKWLPK 265
            +GATAAT KL+  + + +GL FL +D+Q ++DPKRRANLA+ TFAEL  RL+ASVPD +ER ++VRQVA R+H+DLAADM  WNPMRGL+KLSDML+ N ++FLVPYL  E ++KELI  K   E +E LLRS S+ A+T+LMR+IVRVG D  FMSS D +VE FK+ +G+PV+  +G+L  E+QFS+LLA QV+IGRS++FLPPLS+ + KHG +A +AL +SG+VE+    RW +D  ES++VACK EM+EQT  FF+ L K
Sbjct:  398 IGATAATSKLDPSNRKDFGLKFLGRDLQEVEDPKRRANLAVHTFAELSGRLSASVPDEKEREDMVRQVAERLHIDLAADMCLWNPMRGLSKLSDMLSQNNISFLVPYLALEGQLKELIESKAPGEKIENLLRSNSKTADTSLMRVIVRVGLDCLFMSSADTIVESFKRYVGSPVIKVYGTLPRELQFSILLAAQVYIGRSVNFLPPLSDASSKHGGLALQALHDSGMVESTVLLRWKKDTGESQEVACKNEMVEQTERFFERLAK 662
[Close]
BLAST of Gcaud7501.t1 vs. uniprot
Match: A0A2V3IJV7_9FLOR (Eukaryotic translation initiation factor 4G n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJV7_9FLOR)

HSP 1 Score: 318 bits (814), Expect = 3.050e-96
Identity = 155/265 (58.49%), Postives = 206/265 (77.74%), Query Frame = 0 
Query:    1 MGATAATKKLNQGDAEYYGLGFLAKDMQAIDDPKRRANLAIFTFAELYQRLNASVPDHEERANVVRQVANRIHVDLAADMSAWNPMRGLNKLSDMLNNNKVAFLVPYLDTENRVKELISEKECSEDVEKLLRSTSEVANTNLMRMIVRVGFDSFFMSSTDNVVELFKKRIGAPVVSCFGSLTPEVQFSVLLATQVFIGRSLSFLPPLSNTTEKHGDVAFKALLESGLVENETFTRWSQDKAESEKVACKKEMIEQTRLFFKWLPK 265
            +GATAAT KL+  + + +GL FL +D+Q ++DPKRRANLA+ TFAEL  RL+ASVPD +ER ++VRQVA R+H+DLAADM  WNPMRGL+KLSDML+ N ++FLVPYL  E ++KELI  K   E +E LLRS S+ A+T+LMR+IVRVG D  FMSS D +VE FK+ +G+PV+  +G+L  E+QFS+LLA QV+IGRS++FLPPLS+ + KHG +A +AL +SG+VE+    RW +D  ES++VACK EM+EQT  FF+ L K
Sbjct: 1158 IGATAATSKLDPSNRKDFGLKFLGRDLQEVEDPKRRANLAVHTFAELSGRLSASVPDEKEREDMVRQVAERLHIDLAADMCLWNPMRGLSKLSDMLSQNNISFLVPYLALEGQLKELIESKAPGEKIENLLRSNSKTADTSLMRVIVRVGLDCLFMSSADTIVESFKRYVGSPVIKVYGTLPRELQFSILLAAQVYIGRSVNFLPPLSDASSKHGGLALQALHDSGMVESTVLLRWKKDTGESQEVACKNEMVEQTERFFERLAK 1422
The following BLAST results are available for this feature:
BLAST of Gcaud7501.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IH35_9FLOR3.160e-10158.49Eukaryotic translation initiation factor isoform 4... [more]
A0A2V3IJV7_9FLOR3.050e-9658.49Eukaryotic translation initiation factor 4G n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.180coord: 108..266
e-value: 2.0E-8
score: 36.3
IPR003307W2 domainPROSITEPS51363W2coord: 97..267
score: 10.754524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1132_length_13441_cov_4.389588contigNODE_1132_length_13441_cov_4.389588:9850..10653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7501.t1Gcaud7501.t1Gracilaria caudata M_176_S67 malemRNANODE_1132_length_13441_cov_4.389588 9850..10653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7501.t1 ID=Gcaud7501.t1|Name=Gcaud7501.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=268bp
MGATAATKKLNQGDAEYYGLGFLAKDMQAIDDPKRRANLAIFTFAELYQR
LNASVPDHEERANVVRQVANRIHVDLAADMSAWNPMRGLNKLSDMLNNNK
VAFLVPYLDTENRVKELISEKECSEDVEKLLRSTSEVANTNLMRMIVRVG
FDSFFMSSTDNVVELFKKRIGAPVVSCFGSLTPEVQFSVLLATQVFIGRS
LSFLPPLSNTTEKHGDVAFKALLESGLVENETFTRWSQDKAESEKVACKK
EMIEQTRLFFKWLPKAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003307W2_domain