Gcaud7481.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud7481.t1 vs. uniprot
Match: A0A2V3IFE4_9FLOR (Cleavage stimulating factor 64 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE4_9FLOR) HSP 1 Score: 453 bits (1165), Expect = 7.390e-157 Identity = 281/348 (80.75%), Postives = 302/348 (86.78%), Query Frame = 0
Query: 1 MGRPPGTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPPPMMPTPQSHXXXXXXXXXXXXXXXXXSVPPRNQPXXXXXXXXXXXXXXXXXXXXXXXXXNPAPPPQNGPHPQPNMPHGGMQMPGMPFAQGMGEQEAFLQQVMSMTQEEISQLPTEYLNYVLQIKQFLAMHGAGGLNPGMNQPIPPGMPPGGPH 348
MGRPPGTTVFVGNISYDTTEEQL+EVFSQVGNVVNFRLMHD+ETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPN+ QNI+ P +K G QN+ QK HQ+P HP++QHA LPPALASANPSMERM LPE+HQ M+HLKKAIVQNPNEMRDLLLANPRLAQAIMQGQ MLGMVPPPMMP PQ+HXXXXXXXXXXXXXXXXX XXXXX XXXXXXXXXXXXXXXXXX MPH MQMPG+PFAQGMGEQEA LQ VM+M+QEEI+QLP E+ NYVL++KQFLAMHGAGG+NPGMNQP+PPGMPPGG H
Sbjct: 1 MGRPPGTTVFVGNISYDTTEEQLHEVFSQVGNVVNFRLMHDSETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNIAQNITPPASKQGGQNVGQKNVHQVP-HPHLQHAALPPALASANPSMERMSLPEVHQTMLHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQLMLGMVPPPMMPAPQAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVXXXXXXXXXXXXXXXXXXXXX------------MPHALMQMPGLPFAQGMGEQEALLQGVMNMSQEEINQLPAEHRNYVLELKQFLAMHGAGGINPGMNQPMPPGMPPGGNH 335
BLAST of Gcaud7481.t1 vs. uniprot
Match: R7QCA3_CHOCR (RNA recognition motif-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCA3_CHOCR) HSP 1 Score: 250 bits (638), Expect = 2.860e-78 Identity = 136/199 (68.34%), Postives = 156/199 (78.39%), Query Frame = 0
Query: 1 MGRPPGTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPPPMMP 199
MGRPPGTTVFVGNISYDTTE+QL EVFS+VGNVV+FRLM+D++TGRAKG+GFCEYEDKETAMSARRNLNGT LNGRPLRVD TDSDKQ AA NG +S P+ P A++ A PP +P +P LASANPSM M EIH M+HLKKA++QN ++RDLLLANPRLA AI+ GQ MLGMVPPPM+P
Sbjct: 1 MGRPPGTTVFVGNISYDTTEDQLKEVFSEVGNVVSFRLMYDHDTGRAKGFGFCEYEDKETAMSARRNLNGTQLNGRPLRVDLTDSDKQAAAANG------LSLAPD-PHAKSPA--PPXXXXXNP-----AIPAPLASANPSMAAMTPAEIHAAMLHLKKAVLQNRADLRDLLLANPRLAHAILHGQIMLGMVPPPMLP 185
BLAST of Gcaud7481.t1 vs. uniprot
Match: UPI001E1E0131 (cleavage stimulating factor 64-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0131) HSP 1 Score: 184 bits (468), Expect = 3.820e-50 Identity = 101/191 (52.88%), Postives = 126/191 (65.97%), Query Frame = 0
Query: 6 GTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPPP 196
G TVFVGNI+YD TE+QL ++FSQVG VVNFR+++D ETGR KGYGFCEYED ETAMSARRNLNG LNGR LRVDFT+SDK A N +H LP AL+ NPS+ + LP+IH++M+ LK+A + PN++RDLL +P+LA A++QGQ MLGM+P P
Sbjct: 10 GATVFVGNINYDATEDQLKDIFSQVGVVVNFRVVYDQETGRPKGYGFCEYEDAETAMSARRNLNGYELNGRQLRVDFTESDKPGNAATAAGGAGXXXXXXXXXXXXXXXXXXXXXXGVTKNSEHL-LPDALSGPNPSLAMLALPQIHEVMLQLKRAATEFPNDLRDLLANSPQLAHAVLQGQIMLGMIPLP 199
BLAST of Gcaud7481.t1 vs. uniprot
Match: M2XKX0_GALSU (mRNA splicing factor, putative isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKX0_GALSU) HSP 1 Score: 159 bits (401), Expect = 2.160e-42 Identity = 95/201 (47.26%), Postives = 129/201 (64.18%), Query Frame = 0
Query: 11 VGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNL---NQNISAPPN-KPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPP---PMMPTPQSH 204
VGNI+Y+T+EEQL E+ SQ+G +++FR+++D ETG+ KGY FCEY D E A+SA RNLNGT LNGR LRVD DSDK+ ++ N+ N N S N K GA N + N+Q GL + A S+E++ +IH+IM+ +K QNP ++R LLLANP+L A++QGQ MLG+ PP P TP S+
Sbjct: 26 VGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNLNGTELNGRTLRVDLADSDKRELGQSAANMETGNNNPSTASNMKAGALNTSG-------GTGNIQ--GL--SNLGAKGSLEQLSCQQIHEIMLQMKALAQQNPEQVRQLLLANPQLTYALLQGQIMLGLAPPTGWPSQSTPSSN 215
BLAST of Gcaud7481.t1 vs. uniprot
Match: UPI0006B0A5D9 (cleavage stimulation factor subunit 2-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0A5D9) HSP 1 Score: 151 bits (381), Expect = 8.960e-38 Identity = 86/188 (45.74%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 8 TVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPP 195
+VFVGNI Y+ TEEQL ++FS+VG VV+FRL++D ETG+ KGYGFCEY+D+ETA+SA RNLNG LNGRPLRVD S+K NL ++ PP + P P ++ P A++ A S+ P ++ ++M +K I NPNE R++LL NP+LA A++Q Q M+ +V P
Sbjct: 12 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNLNGYELNGRPLRVDNAASEKNKEELK--NLQASLGGPPT-------------ESPYGPEVEPEKAPEAISKAVASL---PPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVMMRIVDP 181
BLAST of Gcaud7481.t1 vs. uniprot
Match: A0A4Y2BUI6_ARAVE (Cleavage stimulation factor subunit 2 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2BUI6_ARAVE) HSP 1 Score: 142 bits (358), Expect = 4.710e-37 Identity = 80/188 (42.55%), Postives = 115/188 (61.17%), Query Frame = 0
Query: 8 TVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPP 195
+VFVGNI Y+ TEEQL ++F++VG VV+FRL++D ETG+ KGYGFCEY+D+E A+SA RNLN LNGR LRVD S+K NL ++ PP + P P + P +A M +P +++++M+ +K I NPNE R+LL+ NP+LA A++Q Q ++ +V P
Sbjct: 17 SVFVGNIPYEATEEQLKDIFAEVGPVVSFRLVYDRETGKPKGYGFCEYKDQEMALSAMRNLNSYELNGRALRVDNAASEKSKEELK--NLQASLGGPP-------------VESPYGPEVTPEKAPETIAKV---MSSVPPEQLYELMIQMKTCIENNPNEARNLLIQNPQLAYALLQAQVIMKVVDP 186
BLAST of Gcaud7481.t1 vs. uniprot
Match: V5HSI3_IXORI (Putative mrna cleavage and polyadenylation factor i complex subunit rna15 (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=V5HSI3_IXORI) HSP 1 Score: 142 bits (358), Expect = 5.260e-37 Identity = 83/188 (44.15%), Postives = 117/188 (62.23%), Query Frame = 0
Query: 8 TVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDKQIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPP 195
+VFVGNI Y+ TEEQL ++FS+VG VV+FRL++D ETG+ KGYGFCEY+D+ETA+SA RNLN LNGRPLRVD S+K NL ++ PP + + A+ P + P+ + A LPP ++ ++M +K I NP E R++LL NP+LA A++Q Q ++ +V P
Sbjct: 9 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNLNAFDLNGRPLRVDNAASEKSKEELK--NLQASLGGPPVE--SPYGAEVEPERAPEAISKAVASLPPE--------------QMFELMKQMKLCIQNNPGEARNMLLQNPQLAYALLQAQVIMKVVEP 178
BLAST of Gcaud7481.t1 vs. uniprot
Match: A0A6P6B8V6_DURZI (cleavage stimulating factor 64 isoform X1 n=3 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6B8V6_DURZI) HSP 1 Score: 148 bits (373), Expect = 1.370e-36 Identity = 96/218 (44.04%), Postives = 125/218 (57.34%), Query Frame = 0
Query: 9 VFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDK-----QIAARNGPNLNQNISAPP--------NKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASANPS------------MERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPPPMMPTP 201
VFVGNI YD TEEQL E+ +VG VV+FRL+ D ETG+ KGYGFCEY+D+ETA+SARRNL G +NGR LRVDF ++DK + R GP L N+ P +P ++A M AGL P +A PS + +M ++++IM LKK + QN R+LLL P+L +AI Q Q MLGMVPP ++ P
Sbjct: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGSDRNREQGRGGPGLTTNVVGGPAVLGESVHQQPIGLHLAITAAALMAGALGGVQAGLQPN-QNALPSQPVPASDPLTLHLAKMSRSQLNEIMSELKKMVTQNKELARELLLTKPQLLKAIFQAQIMLGMVPPQVLQMP 225
BLAST of Gcaud7481.t1 vs. uniprot
Match: A0A7S3EJ57_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ57_9RHOD) HSP 1 Score: 142 bits (359), Expect = 1.940e-36 Identity = 86/200 (43.00%), Postives = 120/200 (60.00%), Query Frame = 0
Query: 2 GRPPGTTVFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDK-QIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASA-NPSMERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPPPMMP 199
G+P TVFVGNI +DTTEE L E+FSQVG V +FRL++D +TG+ KG+GFCEYED ETAMSA RNLNG +NGRPLRV ++ DK ++ + G + Q ++ N G G AS N ERM ++ +M+++K+ I ++ +R LL +P + A++QGQ MLGMVP ++P
Sbjct: 5 GQP--ATVFVGNIPFDTTEEHLKEIFSQVGVVSSFRLVYDQQTGKPKGFGFCEYEDAETAMSALRNLNGVEVNGRPLRVSLSEHDKSRVQEQTGQTVPQGKNSQGNTGGG--------------------GRGDGAASRQNVITERMTPQQVFDVMLNMKELIQKDEGTVRTLLNNDPNMTYALLQGQIMLGMVPAHVIP 182
BLAST of Gcaud7481.t1 vs. uniprot
Match: A0A2P5WUM1_GOSBA (RRM domain-containing protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5WUM1_GOSBA) HSP 1 Score: 142 bits (359), Expect = 3.060e-36 Identity = 96/226 (42.48%), Postives = 125/226 (55.31%), Query Frame = 0
Query: 9 VFVGNISYDTTEEQLNEVFSQVGNVVNFRLMHDNETGRAKGYGFCEYEDKETAMSARRNLNGTMLNGRPLRVDFTDSDK-----QIAARNGPNLNQNISAPPNKPGAQNIAQKPPHQMPDHPNMQHAGLPPALASAN----------------PS------------MERMPLPEIHQIMVHLKKAIVQNPNEMRDLLLANPRLAQAIMQGQFMLGMVPPPMMPTP 201
VFVGNI YD TEEQL E+ +VG VV+FRL+ D ETG+ KGYGFCEY+D+ETA+SARRNL G +NGR LRVDF ++DK + R GP L N P + G Q + + H +Q GL A+ +A PS + RM ++++IM LKK QN R+LLL+ P+L +AI Q Q MLGMV P ++ P
Sbjct: 9 VFVGNIPYDATEEQLIEICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGSDRNREQGRGGPGLATNFD-PQKQLGGQAVHGESFH-------LQPIGLHSAITAAALMAEALGGVQQNQNALPSQPVPTSDPLTLHLARMSRNQLNEIMSELKKMATQNKELARELLLSKPQLLKAIFQAQIMLGMVTPQVLQMP 226 The following BLAST results are available for this feature:
BLAST of Gcaud7481.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud7481.t1 ID=Gcaud7481.t1|Name=Gcaud7481.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=358bpback to top |