Gcaud7480.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7480.t2
Unique NameGcaud7480.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length311
Homology
BLAST of Gcaud7480.t2 vs. uniprot
Match: A0A2V3IFA0_9FLOR (Origin recognition complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFA0_9FLOR)

HSP 1 Score: 332 bits (850), Expect = 7.720e-106
Identity = 168/309 (54.37%), Postives = 228/309 (73.79%), Query Frame = 0
Query:    2 YDIKPHSESSGEIHNMETMDDLSVNVFRAFLVEHDTGEIKFDRFFSPLFVMMRKAGKPMIRSTLTTIIQEISRSLEVTHDDEMRSLSGEAENLLKELNSISDVQNNPPQRKWPHGATTARYAKGGGAARNLRQQMIAAVANEVQSSDPLVPFRKKLESIILRMSKLIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKILGSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVFE 310
            +++ P  ++S  + + E MDDL +N+FR FLV+ +T ++K DR  +P+  ++RKAG+P +R  +    +EIS++   + D+++  +  +   L  E+N  +DV    P+   P  A+++RYA+GGGAAR+ R Q+I+AV +EV SSD LVP RKKLE+II+RM  LI  LKD  + E +LVS+I EL+SFSGGMGG  EPR+S+FTAMRQP K++ +I P +HPD A AYRILAEGGRLV LYDWYN+FAS+  AA+ ++D  GNV+I  V PAELQ+RFARACSELE LGVMKYTNRK+DHVARLVFE
Sbjct:  361 FNVSPRWDTSENLQHNEIMDDLQINIFRGFLVDDETLDVKVDRLIAPILGIVRKAGRPSLRQMIDIAQKEISKAPIHSFDEDIGEIHHDLSLLHDEVNKKTDVHQGQPKYP-PRRASSSRYARGGGAARDRRDQLISAVRSEVHSSDSLVPIRKKLETIIMRMVNLIIPLKDIAMHETILVSNIEELQSFSGGMGGSAEPRTSLFTAMRQPSKLMEAIPPHAHPDVATAYRILAEGGRLVSLYDWYNNFASIATAASRRKDEEGNVQIVPVPPAELQARFARACSELEFLGVMKYTNRKSDHVARLVFE 668          
BLAST of Gcaud7480.t2 vs. uniprot
Match: R7QBI0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBI0_CHOCR)

HSP 1 Score: 185 bits (469), Expect = 7.280e-50
Identity = 108/299 (36.12%), Postives = 172/299 (57.53%), Query Frame = 0
Query:   22 DLSVNVFRAFLVEHDTG-EIKFDRFFSPLFVMMRKAGKPMIRSTLTTIIQEISRSLEVTHDDEMRSLSGEAENLLKELN-SISDVQNNPPQRKWPHGATTAR-------YAKGGGAARNLRQQMIAAVANEVQSSDPLVPFRKKLESIILRMSKLIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKILGSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVK-IAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVFE 310
            DL +++FR+FLV+   G ++        +   +RK+ +  +   +  + +E   + EV +D+++ S     ++L +E+  ++  V+   P+    H  + A+        AKGG AA+  R +++ +   E + S  +   R+ L  I   +  L+  L   P+ E++L SD+A L+  SGG+G   EPR+S F AMR+P   LGSI   S PDT + YR+LAEGGR+  LYDWY+SF+++    A ++D  GN+  +  V PAE Q RF+R C+ELE LG++K+TNRK DHV RL FE
Sbjct:  386 DLRLHIFRSFLVKEQAGADLDVRGVARSIVNRIRKSSRQQMLKAIEAM-KETMEACEVENDEQLTSTVERLKDLSEEMEMALRRVEEEGPRG---HSGSIAKSVSTRRTIAKGGAAAKQRRDELLRSARVEHKESSVMKVPREALVGIFSDLLDLVDKLASHPMHEVLLFSDVAALQELSGGLGSTSEPRTSFFNAMRRPSNCLGSIPENSIPDTVLGYRLLAEGGRMKNLYDWYHSFSTMRTVGAVERDADGNITGLKNVSPAETQVRFSRVCAELEFLGLLKHTNRKTDHVLRLTFE 680          
BLAST of Gcaud7480.t2 vs. uniprot
Match: A0A1B6GKL5_9HEMI (Origin recognition complex subunit 3 n=2 Tax=Proconiini TaxID=565685 RepID=A0A1B6GKL5_9HEMI)

HSP 1 Score: 90.9 bits (224), Expect = 1.250e-16
Identity = 80/300 (26.67%), Postives = 140/300 (46.67%), Query Frame = 0
Query:   22 DLSVNVFRAFLVEHDTGEIKFDRFFSPLFVMMRKAGKPMIRSTLTTIIQEISRSLEVTHDDEMRSLSGEAENLLKELNSISDVQNNPPQRKWPHGATTARYAKGGGAARNLRQQMIAAVANEVQSSDPLVPFRKKLESIILR--MSKLIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKIL----------GSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            ++ + V    +++H     KFD  F  L +M ++         L   I E++R LE    + +  +  E  +L +E++S      +P +    + A      + G     LR+Q++      V+  +     R KL + + +    K + S    PL E+ L+ +++  R   G       PR+++ TA+  PH  L          G I P + PD  + Y++  E G L+ +YDW  SF +++    + +D+       +V PA LQ+RF+RA SEL+ LG +K + +K DHVARL +
Sbjct:  430 EIYIEVMSGPIIQHP----KFDSCFKLLNLMSKQE--------LLQKIDEMNRILE--ESECLAEVQEELMDLRREIDSAGQNMRSPTKSPTKNRAIAMCKDRKG-----LREQLLTP---NVRIENEFEQARSKLLNYLRKNVFQKYLVSPSSMPLHEVFLIDNVSAKRHIVGA------PRAAVHTALHNPHHYLQCDCCKMSSDGEILP-TMPDVCIVYKLHLESGALINMYDWLQSFVTIVSPDDSDRDDR------KVDPA-LQARFSRAVSELQFLGFVKASKKKTDHVARLTW 693          
BLAST of Gcaud7480.t2 vs. uniprot
Match: A0A1B6ISK8_9HEMI (Origin recognition complex subunit 3 n=2 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6ISK8_9HEMI)

HSP 1 Score: 86.3 bits (212), Expect = 5.150e-16
Identity = 74/274 (27.01%), Postives = 125/274 (45.62%), Query Frame = 0
Query:   48 PLFVMMRKAGKPMIRSTLTTIIQEISRSLEVTHDDEMRSLSGEAENLLKELNSISDVQNNPPQRKWPHGATTARYAKGGGAARNLRQQMIAAVANEVQSSDPLVPFRKKLESIILR--MSKLIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKIL----------GSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            P F    K    M +  L   I E+S+ LE    + +  +  +  +L + + S      +P +    + A T    + G     LR+Q++      V+  +     R KL + + +    K + S    PL E+ L+ +++  R   G       PR+++ TA+  PH  L          G I P + PD  + Y++  E G L+ +YDW  SF +++    + +D+       +V P  LQ+RF RA SEL+ LG +K + +K DHVARL +
Sbjct:    9 PKFESCFKLLNLMSKQELLQKIDEMSQILE--ESECLTEVQDQLMDLQRGIESAGQNMRSPTKSPTKNRAITMCKDRKG-----LREQLLTP---NVRIENEFEQARSKLLNYLRKNVFQKYLVSPSSLPLHEVFLIDNVSTKRHIVGA------PRAAIHTALHNPHHYLQCDCCKMSSDGEILP-TMPDVCIVYKLHLESGALINMYDWLQSFVTIVSPEDSDRDDR------KVDPG-LQARFTRAVSELQFLGFVKASKKKTDHVARLTW 258          
BLAST of Gcaud7480.t2 vs. uniprot
Match: A0A821XEP4_9NEOB (Origin recognition complex subunit 3 n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821XEP4_9NEOB)

HSP 1 Score: 82.4 bits (202), Expect = 1.060e-14
Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 0
Query:  172 KDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKILGSIS-----PCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            +D PL E+V  S  + LR     +     PR ++ TA+  P   L S+        + PD  +AY++  E GRL+ LYDW  +FA+V+ A     D+  +  + QV      +RF RA SELE+LG +K T +K DHVARL +
Sbjct:  116 EDQPLYEVVYFSAASVLRKHLNAV-----PRIALHTALHNPSTYLKSLENDGALSSAAPDICIAYKLHLECGRLINLYDWLEAFATVVNA----DDDCDSDYLKQVDEMT-HARFIRAVSELELLGFVKPTKQKTDHVARLTW 248          
BLAST of Gcaud7480.t2 vs. uniprot
Match: A0A482X3Q7_LAOST (Origin recognition complex subunit 3 n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482X3Q7_LAOST)

HSP 1 Score: 84.0 bits (206), Expect = 2.660e-14
Identity = 70/260 (26.92%), Postives = 125/260 (48.08%), Query Frame = 0
Query:   68 IIQEISRSLEVTHD-----DEMRSLSGEAENLLKELNSISDVQNNPPQRKWPHGATTARYAKGGGAARNLRQQMIAAVANEVQSSDPLVPFRKKLESII---LRMSKLIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKIL----------GSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            ++ ++ + LE+  +     + ++SL  + ++  K++ ++   Q +    K P  A      K    +R   ++ +A ++   Q ++P    R  L   +   L  S LI  L   PL E+VL  D+A ++    G      PR+++ TA+  PH  L          G I P + PD  +AY++  E   L+ +YDW  SFA+V+       +  G   +      ++Q+RF +A +EL++LG +K T +KADHV RL +
Sbjct:  448 LLPKLDKMLEILEECNLEGESVKSLKSKLKSHRKKIENVGMEQTSRTPTKSPSKA------KFNVTSRAQFKEQLAKLSETKQPANPYELARMNLLEFLRDELFESTLIP-LTSLPLHEVVLFDDVASVKRRLIGA-----PRAALHTALNNPHHYLECDCCKLSNDGEILP-TMPDVCIAYKLHLESSSLINMYDWLQSFAAVV-----NPNGDGGKDLDD----QIQARFTQAVAELQLLGFIKPTKKKADHVVRLTW 685          
BLAST of Gcaud7480.t2 vs. uniprot
Match: O93513_XENLA (Origin recognition complex subunit 3 n=9 Tax=Xenopus TaxID=8353 RepID=O93513_XENLA)

HSP 1 Score: 83.6 bits (205), Expect = 3.630e-14
Identity = 56/142 (39.44%), Postives = 76/142 (53.52%), Query Frame = 0
Query:  175 PLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKIL-------GSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            PL E+V  S  + LR           PR ++ TA+  P   L       GSIS  + PD  +AY++  E GRL+ LYDW  +FA+V+ AA   + +S     AQ       +RF RA SELE+LG +K T +K DHVARL +
Sbjct:  576 PLHEVVYFSAASTLRRHLNAA-----PRVALHTALNNPASYLKCLENEGGSISNAA-PDICIAYKLHLECGRLINLYDWLEAFATVVHAAEGSESDS-----AQQVDDVTHARFIRAVSELELLGFVKPTKQKTDHVARLTW 706          
BLAST of Gcaud7480.t2 vs. uniprot
Match: A0A6P7U4C0_OCTVU (Origin recognition complex subunit 3 n=4 Tax=Octopus TaxID=6643 RepID=A0A6P7U4C0_OCTVU)

HSP 1 Score: 83.6 bits (205), Expect = 3.640e-14
Identity = 61/173 (35.26%), Postives = 83/173 (47.98%), Query Frame = 0
Query:  150 LVPFRKKLESIILRMSK----LIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKILGSISPC---------SHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            L PF K  E II  M       +K     PL E+     +  L+ +       V PR+++  A+ QPH  L   S C         S PD  VAY++  E GRL+ LYDW  SF +V+  +  K       K+       LQ+RF +A SEL+ LG +K T +K DHVARL +
Sbjct:  553 LSPFEKLREEIISYMDSNFRIFLKCPSSIPLHEVFYYDSLPILQDYF-----TVCPRAAIQKALSQPHSYL-KCSCCEADPGVILSSFPDVCVAYKLHLECGRLINLYDWLQSFITVLEDSENKPKRKDQHKV-------LQARFIQAISELQFLGFIKPTRQKTDHVARLTW 712          
BLAST of Gcaud7480.t2 vs. uniprot
Match: A0A8J6FTH4_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FTH4_ELECQ)

HSP 1 Score: 82.4 bits (202), Expect = 7.880e-14
Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 0
Query:  172 KDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKILGSIS-----PCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            ++ PL E+V  S  + LR     +     PR ++ TA+  P   L S++       + PD  +AY++  E GRL+ LYDW  +FA+V+ A     D+S +  + QV      +RF RA SELE+LG +K T  K DHVARL +
Sbjct:  435 EEQPLYEVVYFSAASVLRRHLNAV-----PRVALHTALNNPSTYLKSLANGRTLSSAAPDICIAYKLHLECGRLINLYDWLEAFATVVHA-----DDSDSESLKQVDEMT-HARFIRAVSELELLGFVKPTKLKTDHVARLTW 566          
BLAST of Gcaud7480.t2 vs. uniprot
Match: UPI00193DA3AA (origin recognition complex subunit 3 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193DA3AA)

HSP 1 Score: 82.4 bits (202), Expect = 8.650e-14
Identity = 69/258 (26.74%), Postives = 119/258 (46.12%), Query Frame = 0
Query:   68 IIQEISRSLEVTHDDEMRSLSGEAENLLKELNS----ISDVQNNPPQRKWPHGATTARYAKGGGAARNLRQQMIAAVANEVQSSDPLVPFRKKLESIILR--MSKLIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVEPRSSMFTAMRQPHKIL----------GSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSFASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRKADHVARLVF 309
            ++ ++ + LE+  D  + S S   +NLL +L +    + +V   P  R      + AR+      +R   ++ +A ++   Q ++     R      +      + +  L   PL E+VL  DIA ++    G      PR+++ TA+  PH  L          G I P + PD  +AY++  E   L+ +YDW  SFA+VI        N  +         ++Q+RF +A +EL++LG +K T +K DHV RL +
Sbjct:  433 LLPKLYKMLEILRDCNVESES--VKNLLNKLKTHCKKLENVGLEPTSRTPTKSPSKARFNV---TSRAQFKEHLAKLSETKQPANAYELARMNFLEFVRDELFEETLNPLTHHPLHEVVLFDDIASVKRRLIGA-----PRAALHTALNNPHHYLECNCCKLSNDGEILP-TMPDVCIAYKLHLESSSLINMYDWLQSFAAVINPNGDSGKNLDD---------QIQARFTQAVAELQLLGFIKSTKKKTDHVVRLTW 670          
The following BLAST results are available for this feature:
BLAST of Gcaud7480.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFA0_9FLOR7.720e-10654.37Origin recognition complex subunit 3 n=1 Tax=Graci... [more]
R7QBI0_CHOCR7.280e-5036.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1B6GKL5_9HEMI1.250e-1626.67Origin recognition complex subunit 3 n=2 Tax=Proco... [more]
A0A1B6ISK8_9HEMI5.150e-1627.01Origin recognition complex subunit 3 n=2 Tax=Cicad... [more]
A0A821XEP4_9NEOB1.060e-1437.06Origin recognition complex subunit 3 n=1 Tax=Ranit... [more]
A0A482X3Q7_LAOST2.660e-1426.92Origin recognition complex subunit 3 n=1 Tax=Laode... [more]
O93513_XENLA3.630e-1439.44Origin recognition complex subunit 3 n=9 Tax=Xenop... [more]
A0A6P7U4C0_OCTVU3.640e-1435.26Origin recognition complex subunit 3 n=4 Tax=Octop... [more]
A0A8J6FTH4_ELECQ7.880e-1437.06Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]
UPI00193DA3AA8.650e-1426.74origin recognition complex subunit 3 n=1 Tax=Nilap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040855Origin recognition complex subunit 3, winged helix C-terminalPFAMPF18137ORC_WH_Ccoord: 203..265
e-value: 2.3E-9
score: 37.6
coord: 266..309
e-value: 2.0E-10
score: 41.0
IPR020795Origin recognition complex, subunit 3PANTHERPTHR12748ORIGIN RECOGNITION COMPLEX SUBUNIT 3coord: 66..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1333_length_11336_cov_4.600178contigNODE_1333_length_11336_cov_4.600178:8682..9614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7480.t2Gcaud7480.t2Gracilaria caudata M_176_S67 malemRNANODE_1333_length_11336_cov_4.600178 8682..9614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7480.t2 ID=Gcaud7480.t2|Name=Gcaud7480.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=311bp
MYDIKPHSESSGEIHNMETMDDLSVNVFRAFLVEHDTGEIKFDRFFSPLF
VMMRKAGKPMIRSTLTTIIQEISRSLEVTHDDEMRSLSGEAENLLKELNS
ISDVQNNPPQRKWPHGATTARYAKGGGAARNLRQQMIAAVANEVQSSDPL
VPFRKKLESIILRMSKLIKSLKDSPLCEIVLVSDIAELRSFSGGMGGPVE
PRSSMFTAMRQPHKILGSISPCSHPDTAVAYRILAEGGRLVGLYDWYNSF
ASVIVAAATKQDNSGNVKIAQVRPAELQSRFARACSELEVLGVMKYTNRK
ADHVARLVFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040855ORC_WH_C
IPR020795ORC3