Gcaud7442.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7442.t1
Unique NameGcaud7442.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length284
Homology
BLAST of Gcaud7442.t1 vs. uniprot
Match: A0A2V3J1D2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1D2_9FLOR)

HSP 1 Score: 410 bits (1055), Expect = 1.780e-142
Identity = 235/284 (82.75%), Postives = 254/284 (89.44%), Query Frame = 0
Query:    1 MMHKIKKATVRDKTADNAEFADYRNRLERLGAYLQASSAALNESERAWKEVCNRQKVFAEAFANSYPDKDEVRDFGKQSAQASQALVKEFVLKTEGSTAPHWAVDAVVQDYLTEIAGISAEYKPITDAKTEVVLYTKKVDDLQNAKKPDEVKIARNXXXXXXXXXXXXXXXXXXVDRMKEVYNKRQVALKATYVAYWSSQLRAFNLLDTSLESTREFVEGSVDSLSAIQIKSMTTEDVSKFLETNTTPSSSPK-TAKTAGAKEVPTSPVEDATETPTEVPAAAI 283
            MMHKIKKATVRD+TADNAEFADYRNRLERLGAYL+ASSAALNESE++WK+VCNRQK+FAEAFANSYPDKDEVRDFGKQSAQ SQALVKEFVLKTEGSTAPHW VDAVVQDYLTEI  I++EYKPI DAKTEV +YT+KVDDLQNAKK DE KI+  XXXXXXXXXXXXXXXXXX   MK VYNKRQVALKATYVAYWSSQLRAFNLLD SLE TR FVEGSV+SLS +QIK+MT ED+ KFLETNTTP+S+PK TA TA  K +PTSPVED+TE P E  A AI
Sbjct:    1 MMHKIKKATVRDRTADNAEFADYRNRLERLGAYLRASSAALNESEKSWKDVCNRQKIFAEAFANSYPDKDEVRDFGKQSAQCSQALVKEFVLKTEGSTAPHWQVDAVVQDYLTEICAIASEYKPIADAKTEVAMYTRKVDDLQNAKKQDESKISXXXXXXXXXXXXXXXXXXXXXXXMKAVYNKRQVALKATYVAYWSSQLRAFNLLDASLEPTRAFVEGSVESLSGVQIKNMTEEDIQKFLETNTTPTSTPKKTAVTAETKALPTSPVEDSTEAPAEPTATAI 284          
BLAST of Gcaud7442.t1 vs. uniprot
Match: A0A7S0ZG18_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG18_9RHOD)

HSP 1 Score: 108 bits (271), Expect = 7.900e-25
Identity = 65/238 (27.31%), Postives = 111/238 (46.64%), Query Frame = 0
Query:    1 MMHKIKKAT--------VRDKTADNAEFADYRNRLERLGAYLQASSAALNESERAWKEVCNRQKVFAEAFANSYPDKDEVRDFGKQSAQASQALVKEFVLKTEGSTAPHWAVDAVVQDYLTEIAGISAEYKPITDAKTEVVLYTKKVDDLQNAKKPDEVKIARNXXXXXXXXXXXXXXXXXXVDRMKEVYNKRQVALKATYVAYWSSQLRAFNLLDTSLESTREFVEGSVDSLSAIQI 230
            M+H  KK          V     +N EF +Y+ R+  +   L  +   L++ E+ W  + + Q++ AE FAN YPD DE+R   K++ +    + K  +      T  +  +   V+ YL E   + +EYK + DAK +   Y KK+DDL+NAK+P+  KI RN                  V + K+ Y+KR    +A +V YW +     + L  +++   +F      +  A+++
Sbjct:    4 MLHGFKKTVFKAENTFGVAQSEPENHEFLEYKQRIANVVRSLSENMLQLDKQEKQWNALVDEQRIQAENFANLYPDDDELRKEAKKAVEILNHVSK--IQDATPDTQNYLKISGKVKKYLAEYTTLESEYKRLYDAKVDFEFYRKKLDDLENAKRPNGEKIDRNMSKFEDVRASYERQLEGVVSKQKQFYSKRTEVFQAAFVCYWLAHGTHMSNLAKNIKPVLDFAASKEKASLALEL 239          
BLAST of Gcaud7442.t1 vs. uniprot
Match: R7QL81_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL81_CHOCR)

HSP 1 Score: 87.0 bits (214), Expect = 9.430e-16
Identity = 50/203 (24.63%), Postives = 96/203 (47.29%), Query Frame = 0
Query:   13 KTADNAEFADYRNRLERLGAYLQASSAALNESERAWKEVCNRQKVFAEAFANSYPDKDEVRDFGKQSAQASQALVKEFVLKTEGSTAPHWAVDAVVQDYLTEIAGISAEYKPITDAKTEVVLYTKKVDDLQNAKKPDEVKIARNXXXXXXXXXXXXXXXXXXVDRMKEVYNKRQVALKATYVAYWSSQLRAFNLLDTSLESTR 215
            K+  NAE+ DYR++LE     +++    +  + + W  +   Q  FA A   +  +   VR   ++  + +   ++  +L+ +G+  PH  V AV++ YL  +  +   Y  +  + TEV+ Y KKVD L   +K  E+ + RN                  ++RMK  YNK +   +  + A+W +Q +   +++ + +S R
Sbjct:   23 KSGINAEYTDYRSKLEATQTAIKSLIKKIQATPQVWSAIAKHQSSFASALHAAIANDGVVRSHARE-VEGTVRQLQRLILEDDGAATPHRRVTAVLEAYLKSVETVQEGYAQVEMSYTEVLRYEKKVDKLNKKQKKREI-LDRNVSKLAAARVEHDNKLAAIMERMKTTYNKHEAVFQCAHHAFWLAQEKYSAVINDTTKSIR 223          
The following BLAST results are available for this feature:
BLAST of Gcaud7442.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1D2_9FLOR1.780e-14282.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0ZG18_9RHOD7.900e-2527.31Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
R7QL81_CHOCR9.430e-1624.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..177
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..256
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 6..221
e-value: 2.1E-50
score: 173.1
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 10..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:80944..81795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7442.t1Gcaud7442.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 80944..81795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7442.t1 ID=Gcaud7442.t1|Name=Gcaud7442.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=284bp
MMHKIKKATVRDKTADNAEFADYRNRLERLGAYLQASSAALNESERAWKE
VCNRQKVFAEAFANSYPDKDEVRDFGKQSAQASQALVKEFVLKTEGSTAP
HWAVDAVVQDYLTEIAGISAEYKPITDAKTEVVLYTKKVDDLQNAKKPDE
VKIARNIEKLEEAKKSYEDILDRVVDRMKEVYNKRQVALKATYVAYWSSQ
LRAFNLLDTSLESTREFVEGSVDSLSAIQIKSMTTEDVSKFLETNTTPSS
SPKTAKTAGAKEVPTSPVEDATETPTEVPAAAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf