Gcaud7430.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7430.t1
Unique NameGcaud7430.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length609
Homology
BLAST of Gcaud7430.t1 vs. uniprot
Match: A0A2V3J1B3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1B3_9FLOR)

HSP 1 Score: 296 bits (759), Expect = 5.460e-89
Identity = 260/620 (41.94%), Postives = 351/620 (56.61%), Query Frame = 0
Query:    1 MPPTTNTQPVSGSGSGEEWLENIRCPTYFDFEAAVAYPCTLGDVNPPLLESVYDSDDETRGFFRSLYEDPSLHRTLHRRSLSPQRNRLQNMGKPLYHHRPQTTFAEYLAEFQRKQAQGTDGTVQESTASSSKTDASPARGLSLPAIS-NSDHTPSPTPQNVNRGTRSDAWIPQVCKDEKSVPLRRPRRSPASSVSVELEQKATQEQPRPRAQPNPARRKPR--PPERSVPQAKCLRATQNDRLSKPEFRVSKETSKPELEGSVMRTRSANNSGSYEKDGSSLNWSSAARSEFTRSANDFEADATDNNTFSVDLDLVKIMEEHNERLRKSKSERGAGSSSSARTES------GTAKDVAYPSAAEATSQVSRSEARNGDTKRPDLSENGTQGSKVDSEDNSIFQTAKSSSFRRNSLSHLLQMENERVLEERXXXXXXXXXXXXXXXXXXXXNVRSSGVGE-RRINPISAQIDFTSAETKKPLRASNDTEQSSTIAANEQKPLSDSTLGRDRERGLRGYRSRMEASRSIPSSSGLTDKGCRAKTTNSCRAGCPKINIDNL---PSRTDMKGGESHSTALGETEETPTHTSISREDVSDDLNLLLTEHNNKIRRNRTIIGAIN 607
            MPP +NT+P   + S + WLENIRCP Y+DFEAAVAYPCT G  NPPL ESVYDSDDETR FF SL E+PSLH TLHRRSLSP+RN L+++G+P+Y HRP TTF EYLAEF+ K  Q  D  V  STA +S+  +  A  L     +  SD TPSP P     GT S    P+   ++K +P RRPRR   SS S   E  ++Q++   +   NPARR+ R  PP   VP +K   AT   R+     +    T +   E   +  R A++  S E   S    SS +RS+   S    E    ++++F+VDLD+VKIMEEHNERLRKSKSER AGS+ SAR +S      G + +    +   A   +  ++  N       + + G   S+++ E  +    +K       SLS LL+ ENE+VL+  XXXXXXXXXXXXXXXX    N+    V E RRINPISA+++FT+ E K PL     ++ + T  +  +   + S  G +RERGL+GY  R        ++S L  +  RA  T S ++  P++  +     P +   + G+ H TA        T +  S +D  DDL LLL+EHN+KIR++R +   IN
Sbjct:    1 MPPASNTRP--SANSEQAWLENIRCPMYYDFEAAVAYPCTAGQHNPPLRESVYDSDDETRDFFLSLEENPSLHPTLHRRSLSPERNTLRSIGRPVYRHRPNTTFEEYLAEFRSKALQ--DDQVAPSTALTSEHSSPLATDLKTQECALKSDRTPSP-PHLQTAGT-SVLHAPKQNANDKVMPQRRPRRPQTSSGSGRTECISSQKKLIQQGHRNPARRRQRVSPP---VPPSK---ATSTHRVVN-SAKADATTDRNSNESDGLGHRRADDLSSNENRMSYWKLSSLSRSDAADSPVAHEHHLAESDSFTVDLDIVKIMEEHNERLRKSKSER-AGSTISARDQSDGTVRGGESFETDIFTDDSANEAIKPTQFGNQSAGHNRVGQLGLCNSELNREYRNSVGISKPIESNGASLSDLLEKENEKVLKXXXXXXXXXXXXXXXXXXNALRNMGQVSVTENRRINPISARVEFTTVEAKTPLTEVESSKSAETNTSTVRGLRAASNHGENRERGLKGYLCR---GGKPTTTSTLASRQNRANPTTSNKSHGPRVLTERTVRQPRQLSAQSGK-HPTA--------TMSPASNKDEQDDLALLLSEHNSKIRKSRRLAATIN 594          
The following BLAST results are available for this feature:
BLAST of Gcaud7430.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1B3_9FLOR5.460e-8941.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..578

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:51666..53492 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7430.t1Gcaud7430.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 51666..53492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7430.t1 ID=Gcaud7430.t1|Name=Gcaud7430.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=609bp
MPPTTNTQPVSGSGSGEEWLENIRCPTYFDFEAAVAYPCTLGDVNPPLLE
SVYDSDDETRGFFRSLYEDPSLHRTLHRRSLSPQRNRLQNMGKPLYHHRP
QTTFAEYLAEFQRKQAQGTDGTVQESTASSSKTDASPARGLSLPAISNSD
HTPSPTPQNVNRGTRSDAWIPQVCKDEKSVPLRRPRRSPASSVSVELEQK
ATQEQPRPRAQPNPARRKPRPPERSVPQAKCLRATQNDRLSKPEFRVSKE
TSKPELEGSVMRTRSANNSGSYEKDGSSLNWSSAARSEFTRSANDFEADA
TDNNTFSVDLDLVKIMEEHNERLRKSKSERGAGSSSSARTESGTAKDVAY
PSAAEATSQVSRSEARNGDTKRPDLSENGTQGSKVDSEDNSIFQTAKSSS
FRRNSLSHLLQMENERVLEERKRRLPERRKALQQNRRNALRNVRSSGVGE
RRINPISAQIDFTSAETKKPLRASNDTEQSSTIAANEQKPLSDSTLGRDR
ERGLRGYRSRMEASRSIPSSSGLTDKGCRAKTTNSCRAGCPKINIDNLPS
RTDMKGGESHSTALGETEETPTHTSISREDVSDDLNLLLTEHNNKIRRNR
TIIGAINI*
back to top