Gcaud7421.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7421.t1
Unique NameGcaud7421.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length297
Homology
BLAST of Gcaud7421.t1 vs. uniprot
Match: A0A2V3J1C2_9FLOR (Ribonuclease P protein subunit p38 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1C2_9FLOR)

HSP 1 Score: 219 bits (557), Expect = 1.540e-67
Identity = 116/214 (54.21%), Postives = 146/214 (68.22%), Query Frame = 0
Query:   81 KIQKKKIWGSKQVLSSPFALTFPLATAGTKMAILNLFAQQFPEPFGKRNTRPSLTALADEGTRIVDKERRKGERSERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLVEKLRPCYSKLDYKWLAAIRGKTTPCLPDPSMVPHKKKEDILAPL 294
            K QKKK+WGSKQVL+SPFA T          A+L +  Q FP PF  R TRPS  +   +  R  D+   +       KP R+L GINEVTRALE+N  E+V+VSRDVTPAFL+THIPILCF+ SA LVVL G+GTELGH+LG +R +A  +L+ TS +S   +  D L+E+L P  + L+Y WLAAI+GK  P LPDP M+PHK K++ILAPL
Sbjct:   16 KSQKKKVWGSKQVLASPFASTXXXXXXXXXXAVLQIIVQLFPTPFITRKTRPSKASQDSDRARKDDQHDTRNS-----KPPRMLCGINEVTRALEKNRVEVVIVSRDVTPAFLVTHIPILCFLTSAKLVVLPGDGTELGHLLGTKRLLAFGLLRKTSDHSKDTELADLLIERLVPHSTPLEYPWLAAIKGKKVPTLPDPVMIPHKTKKEILAPL 224          
BLAST of Gcaud7421.t1 vs. uniprot
Match: R7QAC3_CHOCR (Ribosomal_L7Ae domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAC3_CHOCR)

HSP 1 Score: 179 bits (455), Expect = 3.050e-52
Identity = 98/210 (46.67%), Postives = 136/210 (64.76%), Query Frame = 0
Query:   83 QKKKIWGSKQVLSSPFALTFPLATAGTKMAILNLFAQQFPEPFGKRNTRPSLTALADEGTRIVDKERRKGERSERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLVEKLRPCYSKLDYKWLAAIRGK--TTPCLPDPSMVPHKKKEDI 290
            QKKK+W SKQVL+SPFA   P AT GT+ A+L +     P PF +R  RPS  +L  +    V  E         KKP RLL+GINEVTRALER S  LV+++RDVTPA L+ H+P+LCF+  A LVV+ G+GT++G +LG RR +A+ V +    + D+    + +++ L+P  ++L+Y WLAA + K  T P LP+P  VPH+ K+DI
Sbjct:   15 QKKKVWRSKQVLASPFAPVMPAATLGTRDAVLRVLLSAVPVPFAQREPRPSRASLPPQA---VPAEAAPPPHKLCKKPARLLVGINEVTRALERGSVALVLLARDVTPALLVQHVPVLCFLAGAQLVVMPGDGTDMGLVLGTRRVLAVGVAERGE-DGDSSGVAEMILQGLKPLATRLEYPWLAAAKRKKGTPPPLPEPVSVPHRNKKDI 220          
BLAST of Gcaud7421.t1 vs. uniprot
Match: A0A1S3ISB0_LINUN (uncharacterized protein LOC106166727 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3ISB0_LINUN)

HSP 1 Score: 67.4 bits (163), Expect = 5.580e-9
Identity = 54/187 (28.88%), Postives = 88/187 (47.06%), Query Frame = 0
Query:   80 GKIQKKKIWGSKQVLSSPFALTFPLATAGTKMAILNLFAQQFPEPFGKRNTRPSLTALADEGTRIVDKERRKGER-SERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLVEKLRPCYSKLDYKWL 265
            GKI  KK    KQVLSSP+ +++P     T++ +L    ++  + F  R   P       +  +   +E+RK E  + +     + +GIN VT+ LER+    V+V RDV P  +  H+ +L   +    V LSG  + +G ++G++   A+   K+    S      D LVE +      L   WL
Sbjct:   17 GKIAAKKKKSLKQVLSSPYNVSWPAVEKQTEVVLLERIKKELSQNFVTRPRVPQQIRRNKQQMKKWREEQRKVEDIASKATQSSVYIGINRVTKGLERDEVSAVIVDRDV-PVMMTRHLMLLAATRDCPAVCLSGLSSVIGPVVGMKSVAAISFKKSVQGASTL---YDDLVEFVSSHAPVLQVPWL 199          
BLAST of Gcaud7421.t1 vs. uniprot
Match: A0A1V5QNJ1_9ARCH (50S ribosomal protein L7Ae n=1 Tax=archaeon ADurb.Bin336 TaxID=1866922 RepID=A0A1V5QNJ1_9ARCH)

HSP 1 Score: 61.2 bits (147), Expect = 2.940e-8
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 0
Query:  137 LADEGTRIVDKERRKGERSERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLVE 251
            L DE   IV+K + KG+         +  GINEVT+A+ER  A+LVV++ DV PA ++ H+PILC  K+     ++    ELG   G+R   A   +  T   +D +    +L E
Sbjct:   13 LRDETVSIVEKSK-KGK---------IKAGINEVTKAIERGVAKLVVIAEDVNPAEVVMHLPILCEEKNIPFSYIATR-KELGEKAGLRTATASIAIIETEAEADIKDLAKKLAE 116          
BLAST of Gcaud7421.t1 vs. uniprot
Match: A0A7S2ZFJ3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFJ3_9RHOD)

HSP 1 Score: 61.2 bits (147), Expect = 6.250e-8
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 0
Query:  164 LLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCV 232
            ++G+N VTRALER S +LVV+ R V P  LI H+P LC    A+LVVL+ NG +L  I   +R  ++ +
Sbjct:   67 IIGLNHVTRALERGSVKLVVLCRLVQPIHLIEHLPSLCSENKAHLVVLASNGHDLASIFKQKRTTSIAL 135          
BLAST of Gcaud7421.t1 vs. uniprot
Match: A0A507B4D0_9PEZI (Ribonucloprotein n=1 Tax=Phialemoniopsis curvata TaxID=1093900 RepID=A0A507B4D0_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 6.560e-7
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0
Query:  166 GINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLVEKL 253
            G NEVT++L R +AELVV++ D TP  ++ H+P+LC  K+   V L G+  +LG   G+ R +    +  T+  SD    + RL EK+
Sbjct:   40 GANEVTKSLNRGTAELVVLAADTTPLSIVLHLPLLCEDKNVPYVFL-GSKLQLGRACGVSRPVIAATI-TTNEASDLAGQIKRLKEKV 125          
BLAST of Gcaud7421.t1 vs. uniprot
Match: UPI001885EB4A (ribonuclease P protein subunit p38 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885EB4A)

HSP 1 Score: 60.1 bits (144), Expect = 7.350e-7
Identity = 58/202 (28.71%), Postives = 88/202 (43.56%), Query Frame = 0
Query:   76 KQPSGKIQKKKIWGSKQVLSSPFALT----------FPLATAGTKMAILNLFAQQFP--EPFGKRNTRPSLTALADEGTRIVDKERRKGERSERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLVEKLRPCYSKLDYKWL 265
            K+  GK   KK    K V ++PF L           F L T   K+  L L  ++     P+ KR T P   +   +  ++ D    KG  ++     +L LGINEVT+ALERN  +LV+V + V P  + +H+  L   +      +      +   LG++  +AL   +N +     E   D  VE + P    LD  WL
Sbjct:    5 KKSGGKKASKKPIRVKTVFTTPFPLNWSPLPQNDMHFILTTLKDKLISLGLEKKEVKVFRPWRKRKTGPDTLSTDMDSNKMADSP--KGGWTDVTVRRQLALGINEVTKALERNQLKLVLVCKSVKPKHMTSHLIALSASRGVPACQVPRLSESVAEPLGLKSVLALG-FRNRAGRDKAEAFADA-VEAIIPKVPSLDVPWL 202          
BLAST of Gcaud7421.t1 vs. uniprot
Match: A0A842V5M2_9ARCH (50S ribosomal protein L7ae n=1 Tax=archaeon TaxID=1906665 RepID=A0A842V5M2_9ARCH)

HSP 1 Score: 55.5 bits (132), Expect = 1.800e-6
Identity = 28/73 (38.36%), Postives = 46/73 (63.01%), Query Frame = 0
Query:  162 RLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRR-CMALCVL 233
            R+  G+NEVT+A+ER  A+LVV++ DV P  ++ H+P+LC  K    V +     ELG  +GI + C ++ ++
Sbjct:    4 RVKKGVNEVTKAVERGVAKLVVIAEDVNPKVIVAHLPVLCEEKDIKYVYVPSK-QELGEAIGITKACSSVAII 75          
BLAST of Gcaud7421.t1 vs. uniprot
Match: A0A8B7ZQ74_ACAPL (uncharacterized protein LOC110988102 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZQ74_ACAPL)

HSP 1 Score: 59.3 bits (142), Expect = 2.390e-6
Identity = 55/186 (29.57%), Postives = 82/186 (44.09%), Query Frame = 0
Query:   80 GKIQKKKIWGSKQVLSSPFALTFPLATAGTKMAILNLFAQQFPEPFGKRNTRPSLTALADEGTRIVDKERRKGERSERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLVEKLRPCYSKLDYKWL 265
            GK   K  +  K  ++SPF+  +P  +      IL      F  P  +     SL     +G R V  E  K +R+  +   +L LG+NEVTR+LER    L VV R   PA   +H+  L   +   ++ L G  + L  IL ++  +A+   K TS   D   + D LV  +      +D  WL
Sbjct:   15 GKKGNKNYFPVKNAITSPFSSEWPQLSQEETATILQKITSAFT-PHAE-----SLAKQPSKGKRKVVSEEAKTKRAFLRS--QLALGVNEVTRSLERGGLRLAVVCRSAQPALTTSHLMSLGATRDTPVLCLRGLSSTLAPILKLKVLLAVGFKKLTS---DDPTAFDDLVNFIVAMTPPIDIPWL 189          
BLAST of Gcaud7421.t1 vs. uniprot
Match: UPI000E463426 (ribonuclease P protein subunit p38 n=1 Tax=Anabas testudineus TaxID=64144 RepID=UPI000E463426)

HSP 1 Score: 58.5 bits (140), Expect = 2.530e-6
Identity = 54/210 (25.71%), Postives = 92/210 (43.81%), Query Frame = 0
Query:   81 KIQKKKIWGSKQVLSSPFALT----------FPLATAGTKMAILNLFAQQFP--EPFGKRNTRPSLTALADEGTRIVDKERRKGERSERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPILCFVKSANLVVLSGNGTELGHILGIRRCMAL----CVLKNTSVNSDTEQSVDRLVEKLRPCYSKLDYKWLAAIRGKTTP 274
            K + K+   +K   +SPF  T          F L T   K+  L L  ++     P+ K+  +P    +++   ++ D    K   ++     +L +GINEVT+ALERN  +LV+V + V P  +  H+  L   +      +      +   LG++  +AL    C  K+  V +DT       V+ ++P    LD +WL  +    TP
Sbjct:    9 KKETKRQTPAKTSFNSPFTPTWRPIPQEDMHFILKTLKDKLLFLGLEKKEVKVFRPWRKKKEQPPAAVVSEPVCQVQDSP--KNGWTDVAARRQLAIGINEVTKALERNELKLVLVCKSVKPKHMTNHLIALSATRGVPACQVPRLSQSVSGPLGLKSVLALGFRRCASKDEEVFTDT-------VDAIKPKVPSLDVEWLHDVAATLTP 209          
The following BLAST results are available for this feature:
BLAST of Gcaud7421.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A2V3J1C2_9FLOR1.540e-6754.21Ribonuclease P protein subunit p38 n=1 Tax=Gracila... [more]
R7QAC3_CHOCR3.050e-5246.67Ribosomal_L7Ae domain-containing protein n=1 Tax=C... [more]
A0A1S3ISB0_LINUN5.580e-928.88uncharacterized protein LOC106166727 n=2 Tax=Lingu... [more]
A0A1V5QNJ1_9ARCH2.940e-835.6550S ribosomal protein L7Ae n=1 Tax=archaeon ADurb.... [more]
A0A7S2ZFJ3_9RHOD6.250e-846.38Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A507B4D0_9PEZI6.560e-738.64Ribonucloprotein n=1 Tax=Phialemoniopsis curvata T... [more]
UPI001885EB4A7.350e-728.71ribonuclease P protein subunit p38 n=1 Tax=Syngnat... [more]
A0A842V5M2_9ARCH1.800e-638.3650S ribosomal protein L7ae n=1 Tax=archaeon TaxID=... [more]
A0A8B7ZQ74_ACAPL2.390e-629.57uncharacterized protein LOC110988102 n=1 Tax=Acant... [more]
UPI000E4634262.530e-625.71ribonuclease P protein subunit p38 n=1 Tax=Anabas ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 156..235
e-value: 3.3E-12
score: 45.9
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 113..275
e-value: 7.9E-23
score: 82.9
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 158..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
IPR042848Ribonuclease P protein subunit Rpp38PANTHERPTHR46948RIBONUCLEASE P PROTEIN SUBUNIT P38coord: 72..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:28905..29886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7421.t1Gcaud7421.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 28905..29886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7421.t1 ID=Gcaud7421.t1|Name=Gcaud7421.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=297bp
LEKQPSRKNQKQNARASDTKKQSYGKIRKQSKKASGTRREPSSKAPKPNT
IASGTKEKTYVTIQRQESKVTSTRNKQPSGKIQKKKIWGSKQVLSSPFAL
TFPLATAGTKMAILNLFAQQFPEPFGKRNTRPSLTALADEGTRIVDKERR
KGERSERKKPLRLLLGINEVTRALERNSAELVVVSRDVTPAFLITHIPIL
CFVKSANLVVLSGNGTELGHILGIRRCMALCVLKNTSVNSDTEQSVDRLV
EKLRPCYSKLDYKWLAAIRGKTTPCLPDPSMVPHKKKEDILAPLDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR042848Rpp38