Gcaud7411.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7411.t1
Unique NameGcaud7411.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length98
Homology
BLAST of Gcaud7411.t1 vs. uniprot
Match: A0A2V3IH70_9FLOR (Histone deacetylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH70_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 2.420e-36
Identity = 65/97 (67.01%), Postives = 75/97 (77.32%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDEDELDSDQRNISDEKQVDGEFFDDESDHGMDWS 97
            NDYWEYFAPDHKLHF  D +VKN+NTP YI  V EK++ENLRCL AAPSV+MQEI S+L+  DDEDE D D     D +Q DGEF+DD+ DHGMD S
Sbjct:  328 NDYWEYFAPDHKLHFEKDNSVKNMNTPRYIDSVKEKVIENLRCLCAAPSVQMQEIPSVLFFSDDEDEQDPDVSTHVDHRQADGEFYDDDEDHGMDAS 424          
BLAST of Gcaud7411.t1 vs. uniprot
Match: A0A2V3IJP0_9FLOR (Histone deacetylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP0_9FLOR)

HSP 1 Score: 109 bits (272), Expect = 3.300e-26
Identity = 51/97 (52.58%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDEDELDSDQRNISDEKQVDGEFFDDESDHGMDWS 97
            NDYW+YF PDH+LHF  +  + + N+  YI ++  K+MENLRCL+AAPSV+MQE+    +  +DEDE + D R   D +Q DGEF+DD+ DHGMD S
Sbjct:  330 NDYWQYFEPDHRLHFKKNPEMVDQNSRGYIDQLKIKVMENLRCLNAAPSVQMQEVPPTYFVSEDEDEQNPDMRPRVDRRQADGEFYDDDKDHGMDIS 426          
BLAST of Gcaud7411.t1 vs. uniprot
Match: R7QD25_CHOCR (Histone deacetylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD25_CHOCR)

HSP 1 Score: 95.5 bits (236), Expect = 3.160e-21
Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITS-ILYCCDDE-DELDSDQRNISDEKQVDGEFFD 87
            NDYWEYFAP+HKLHF   K V ++N+ +Y+ K+ EKIMENLRCLDAAPSV+M  + S I Y  DD  D LD D R  +  ++ D EF+D
Sbjct:  303 NDYWEYFAPEHKLHFPPKKMV-DMNSKDYLEKMVEKIMENLRCLDAAPSVQMHTVPSGISYFSDDNNDNLDPDMREENGRRKADNEFYD 390          
BLAST of Gcaud7411.t1 vs. uniprot
Match: R7QHU9_CHOCR (Histone deacetylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHU9_CHOCR)

HSP 1 Score: 95.5 bits (236), Expect = 4.160e-21
Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDEDELDSDQRNISDEKQVDGEFFDDESDHGM 94
            NDYW+YF PDH LHF     + + N+ +YI K+  K+MENLRCL+AAPSV+MQE+    +  +DEDE D D+R    +K  +GEF+D + D+GM
Sbjct:  330 NDYWQYFEPDHNLHFPKTD-LDDQNSRDYIDKLKIKVMENLRCLNAAPSVQMQEMPPTYFVSEDEDERDPDKRVRPSQKDAEGEFYDHDRDNGM 422          
BLAST of Gcaud7411.t1 vs. uniprot
Match: UPI001E1D7B69 (histone deacetylase 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7B69)

HSP 1 Score: 95.5 bits (236), Expect = 4.190e-21
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDE-DEL-DSDQRNISDEKQVDGEFFDDESDHGMD 95
            NDYW+Y+ PDHKLHF      +N N   Y+ K+  K++ENLRCL+AAPSV+MQE+  I     DE D+L D D  N +D++Q +GEFFDD+ D G+D
Sbjct:  330 NDYWQYYEPDHKLHFPKT-AAENNNGREYLEKLKTKVLENLRCLNAAPSVQMQEVPPIYNFSSDEIDDLKDPDAPNGTDKRQAEGEFFDDDKDQGLD 425          
BLAST of Gcaud7411.t1 vs. uniprot
Match: M2X5B7_GALSU (Histone deacetylase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X5B7_GALSU)

HSP 1 Score: 77.4 bits (189), Expect = 1.350e-14
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDEDELDSDQR 73
            NDYWEYFAP++++H      + N N P Y+ KV  K++EN+R L  APSV+MQEI  ++Y  D+EDE D D R
Sbjct:  331 NDYWEYFAPEYRIH-QPPLDLPNKNDPEYLDKVRSKVLENIRHLACAPSVQMQEIPPMMYDVDEEDETDPDVR 402          
BLAST of Gcaud7411.t1 vs. uniprot
Match: A0A7S3A3U2_9RHOD (Histone deacetylase (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3U2_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 1.770e-14
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDEDELDSDQR 73
            ND+W+YFAPD  LH   + +++N N   Y+ K+  K+MENLR + AAPSV+MQE+    Y  DDED+LD D R
Sbjct:  328 NDFWDYFAPDFNLHIK-EMSIENKNGKEYLDKLKVKVMENLRSITAAPSVQMQELPPTYYPSDDEDDLDPDVR 399          
BLAST of Gcaud7411.t1 vs. uniprot
Match: A0A8B7ZEV8_ACAPL (Histone deacetylase n=4 Tax=Asteroidea TaxID=7588 RepID=A0A8B7ZEV8_ACAPL)

HSP 1 Score: 73.9 bits (180), Expect = 2.380e-13
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDEDELDSDQRNISDEK----QVDGEFFDDESD 91
            NDY+EYF PD  LH      ++NLNT  YI +V + + ENL+C++ APSV+MQ++   L   ++ +E D D RN + E+    +   EF+D + D
Sbjct:  327 NDYFEYFGPDFTLHPDTTTRIENLNTKQYIDQVRQTVQENLKCIEHAPSVQMQDVPPDLLSLEETEEADPDVRNSTKEQDERIEPANEFYDGDKD 421          
BLAST of Gcaud7411.t1 vs. uniprot
Match: K3WLG8_GLOUD (Histone deacetylase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WLG8_GLOUD)

HSP 1 Score: 73.6 bits (179), Expect = 3.360e-13
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEIT-SILYCCDDEDELDSDQRNISDEK-QVDGEFFDDESD 91
            NDY+EY+AP+ KLH   D  ++N N+  Y+ +   KI ENLR L  APSV+M E+  S +   +DED +D D R  +D K Q D EF+ D+ D
Sbjct:  331 NDYFEYYAPNFKLHLEPDLDLENANSKEYLEEYKIKIFENLRALTGAPSVQMNEVPPSFMIREEDEDAMDPDLRTDNDGKRQHDAEFYRDDKD 423          
BLAST of Gcaud7411.t1 vs. uniprot
Match: A0A7I8VAM6_9ANNE (Histone deacetylase n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VAM6_9ANNE)

HSP 1 Score: 72.8 bits (177), Expect = 6.120e-13
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSVEMQEITSILYCCDDEDELDSDQRNI-SDEKQVD--GEFFDDESD 91
            N+Y EYFAPD  LH       +N+N   Y+  + + + ENL+ L  APSV+MQ++    Y  D+  E D D RN+  DEK+ +  GEF+D+E D
Sbjct:  328 NEYAEYFAPDFILHLDIASKQENMNNKQYLESIKQTVFENLKMLQHAPSVQMQDVPPDFYQIDERGEQDPDSRNLLDDEKRAEHGGEFYDNERD 421          
The following BLAST results are available for this feature:
BLAST of Gcaud7411.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH70_9FLOR2.420e-3667.01Histone deacetylase n=1 Tax=Gracilariopsis chorda ... [more]
A0A2V3IJP0_9FLOR3.300e-2652.58Histone deacetylase n=1 Tax=Gracilariopsis chorda ... [more]
R7QD25_CHOCR3.160e-2156.18Histone deacetylase n=1 Tax=Chondrus crispus TaxID... [more]
R7QHU9_CHOCR4.160e-2150.00Histone deacetylase n=1 Tax=Chondrus crispus TaxID... [more]
UPI001E1D7B694.190e-2151.55histone deacetylase 1-like n=1 Tax=Mercenaria merc... [more]
M2X5B7_GALSU1.350e-1450.68Histone deacetylase n=1 Tax=Galdieria sulphuraria ... [more]
A0A7S3A3U2_9RHOD1.770e-1450.68Histone deacetylase (Fragment) n=3 Tax=Rhodosorus ... [more]
A0A8B7ZEV8_ACAPL2.380e-1340.00Histone deacetylase n=4 Tax=Asteroidea TaxID=7588 ... [more]
K3WLG8_GLOUD3.360e-1345.16Histone deacetylase n=2 Tax=Pythiaceae TaxID=4782 ... [more]
A0A7I8VAM6_9ANNE6.120e-1341.49Histone deacetylase n=1 Tax=Dimorphilus gyrociliat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..97
NoneNo IPR availablePANTHERPTHR10625:SF201HISTONE DEACETYLASE 3coord: 1..93
NoneNo IPR availablePANTHERPTHR10625HISTONE DEACETYLASEcoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:2..295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7411.t1Gcaud7411.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 2..295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7411.t1 ID=Gcaud7411.t1|Name=Gcaud7411.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=98bp
NDYWEYFAPDHKLHFSADKTVKNLNTPNYIRKVTEKIMENLRCLDAAPSV
EMQEITSILYCCDDEDELDSDQRNISDEKQVDGEFFDDESDHGMDWS*
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