Gcaud74.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud74.t1
Unique NameGcaud74.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length178
Homology
BLAST of Gcaud74.t1 vs. uniprot
Match: A0A2V3IM51_9FLOR (DNA replication licensing factor MCM5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM51_9FLOR)

HSP 1 Score: 263 bits (671), Expect = 3.630e-80
Identity = 136/153 (88.89%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            ML+I+R PNLE IIARSIAPEI GHE IKKAIAAQ FG ALDKTLPDGMR  GDIN LLLGDP+TAKSQML FAERVAPI VYTSGKGSSAAGLTA VIKDKAHGEFHLEGGAMVLADGG+VCIDE DKMRLQDRVAIHEAMEQQTISIAKAG
Sbjct:  364 MLNIARTPNLEDIIARSIAPEIFGHEDIKKAIAAQLFGGALDKTLPDGMRLRGDINALLLGDPSTAKSQMLKFAERVAPISVYTSGKGSSAAGLTASVIKDKAHGEFHLEGGAMVLADGGIVCIDEFDKMRLQDRVAIHEAMEQQTISIAKAG 516          
BLAST of Gcaud74.t1 vs. uniprot
Match: R7QT75_CHOCR (DNA replication licensing factor MCM5 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT75_CHOCR)

HSP 1 Score: 255 bits (652), Expect = 2.200e-77
Identity = 133/153 (86.93%), Postives = 138/153 (90.20%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            ML ISR P L  II+RS+APEI GH+ IKKAIAAQ FG ALDKTLPDGMR  GDINVLLLGDP+TAKSQML +AERVAPI VYTSGKGSSAAGLTA VIKDKAHGEFHLEGGAMVLADGGLVCIDE DKMRLQDRVAIHEAMEQQTISIAKAG
Sbjct:  372 MLRISRTPGLCDIISRSVAPEIFGHKDIKKAIAAQLFGGALDKTLPDGMRLRGDINVLLLGDPSTAKSQMLKYAERVAPISVYTSGKGSSAAGLTASVIKDKAHGEFHLEGGAMVLADGGLVCIDEFDKMRLQDRVAIHEAMEQQTISIAKAG 524          
BLAST of Gcaud74.t1 vs. uniprot
Match: UPI001E1D8AF6 (LOW QUALITY PROTEIN: DNA replication licensing factor MCM5-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8AF6)

HSP 1 Score: 250 bits (639), Expect = 1.130e-76
Identity = 130/153 (84.97%), Postives = 136/153 (88.89%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            ML ISR P L ++IA SIAPEI GHE IK+AIAAQ FG   DKTLPDGMR  GDINVLLLGDP+TAKSQML FAERVAPI VYTSGKGSSAAGLTA +IKDKAHGEFHLEGGAMVLADGG+VCIDE DKMRLQDRVAIHEAMEQQTISIAKAG
Sbjct:  242 MLRISRTPQLYKLIAASIAPEIYGHEDIKRAIAAQLFGGGSDKTLPDGMRLRGDINVLLLGDPSTAKSQMLKFAERVAPISVYTSGKGSSAAGLTASLIKDKAHGEFHLEGGAMVLADGGVVCIDEFDKMRLQDRVAIHEAMEQQTISIAKAG 394          
BLAST of Gcaud74.t1 vs. uniprot
Match: A0A1X6NPI0_PORUM (DNA replication licensing factor MCM5 (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPI0_PORUM)

HSP 1 Score: 228 bits (581), Expect = 7.530e-68
Identity = 116/153 (75.82%), Postives = 128/153 (83.66%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            M++++R P L   +ARSIAPEI GHE IK+AIAA  FG A DK LPDGMR  GDINVLLLGDP+TAKSQ+L F ER AP+ VYTSGKGSSAAGLTA V++D  HGEFHLEGGAMVLADGG+VCIDE DKM   DRVAIHEAMEQQTISIAKAG
Sbjct:  438 MMALARTPGLYDKVARSIAPEIFGHEDIKRAIAALLFGGAPDKQLPDGMRLRGDINVLLLGDPSTAKSQLLKFVERAAPVSVYTSGKGSSAAGLTASVVRDAGHGEFHLEGGAMVLADGGVVCIDEFDKMDAGDRVAIHEAMEQQTISIAKAG 590          
BLAST of Gcaud74.t1 vs. uniprot
Match: M2XST7_GALSU (DNA replication licensing factor MCM5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XST7_GALSU)

HSP 1 Score: 226 bits (577), Expect = 6.910e-67
Identity = 121/153 (79.08%), Postives = 128/153 (83.66%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            M+ ISR PNL  IIA SIAPEI GHE IKKAIA   F  +  K LPDGMR  GDINVLLLGDP+TAKSQ+L F E+VAPI VYTSGKGSSAAGLTA VI+D A GEFHLEGGAMVLADGG+VCIDE DKMRL DRVAIHEAMEQQTISIAKAG
Sbjct:  330 MIRISRMPNLYSIIANSIAPEIYGHEDIKKAIACLLFAGST-KHLPDGMRIRGDINVLLLGDPSTAKSQLLKFVEKVAPISVYTSGKGSSAAGLTASVIRDAASGEFHLEGGAMVLADGGVVCIDEFDKMRLADRVAIHEAMEQQTISIAKAG 481          
BLAST of Gcaud74.t1 vs. uniprot
Match: M1V4M8_CYAM1 (DNA replication licensing factor MCM5 n=2 Tax=cellular organisms TaxID=131567 RepID=M1V4M8_CYAM1)

HSP 1 Score: 221 bits (564), Expect = 5.270e-65
Identity = 115/153 (75.16%), Postives = 129/153 (84.31%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            M S+SR PN+ +++A SIAPEI G    K+A+  Q FG +  KTLPDGMR  GDINVLLLGDP+TAKSQ+L FAE+VAP+ VYTSGKGSSAAGLTA VI+D  HGEFHLEGGAMVLADGG+VCIDE DKMRL DRVAIHEAMEQQTISIAKAG
Sbjct:  322 MRSLSRLPNVYEVLAASIAPEIWGLSDPKRAVLCQLFGGSR-KTLPDGMRIRGDINVLLLGDPSTAKSQLLKFAEKVAPVSVYTSGKGSSAAGLTASVIRDATHGEFHLEGGAMVLADGGIVCIDEFDKMRLADRVAIHEAMEQQTISIAKAG 473          
BLAST of Gcaud74.t1 vs. uniprot
Match: A0A7J7IKA3_9RHOD (DNA replication licensing factor MCM5 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKA3_9RHOD)

HSP 1 Score: 218 bits (554), Expect = 1.510e-63
Identity = 115/153 (75.16%), Postives = 126/153 (82.35%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            M   SR P++  I+A SIAPEI G    K+A+  Q FG A  K+LPDGM+  GDINVLLLGDP+TAKSQ+L FAERVAPI VYTSGKGSSAAGLTA VI+D  HGEFHLEGGAMVLADGG+VCIDE DKMRL DRVAIHEAMEQQTISIAKAG
Sbjct:  325 MRRFSRQPDVYHILAASIAPEIWGLSDPKRAVLCQLFGGAR-KSLPDGMKIRGDINVLLLGDPSTAKSQLLKFAERVAPISVYTSGKGSSAAGLTASVIRDATHGEFHLEGGAMVLADGGIVCIDEFDKMRLADRVAIHEAMEQQTISIAKAG 476          
BLAST of Gcaud74.t1 vs. uniprot
Match: A0A7S0H5B0_9EUKA (DNA replication licensing factor MCM5 n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H5B0_9EUKA)

HSP 1 Score: 207 bits (528), Expect = 1.410e-62
Identity = 109/150 (72.67%), Postives = 125/150 (83.33%), Query Frame = 0
Query:    4 ISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            IS+ P+L   I++SIAP I+GHE IKKAIAAQ FG A  K LPDGMR  GDINVLLLGDP+  KSQ L +A+ VAP+ VYTSGKGSSAAGLTA VI+D + G F+LEGGA+VLADGG+VCIDE DKMR +DR+AIHEAMEQQTISIAKAG
Sbjct:    8 ISKMPDLFDKISKSIAPSIMGHEDIKKAIAAQLFGGAR-KHLPDGMRIRGDINVLLLGDPSLGKSQFLKYAKEVAPVCVYTSGKGSSAAGLTASVIRDPSSGGFNLEGGALVLADGGIVCIDEFDKMREEDRIAIHEAMEQQTISIAKAG 156          
BLAST of Gcaud74.t1 vs. uniprot
Match: A0A1R1XIC6_9FUNG (DNA replication licensing factor MCM5 n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XIC6_9FUNG)

HSP 1 Score: 207 bits (528), Expect = 1.850e-62
Identity = 111/153 (72.55%), Postives = 123/153 (80.39%), Query Frame = 0
Query:    1 MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            ML+ISR PN+ ++ A SIAP I G+  IKKAI    FG +  K LPDGMR  GDINVLLLGDP TAKSQ+L F E+VAPI +YTSGKGSSAAGLTA VIKD    E +LEGGAMVLADGG+VCIDE DKMR +DRVAIHEAMEQQTISIAKAG
Sbjct:   23 MLAISRIPNIYRVFADSIAPSIFGNSDIKKAITCLLFGGS-KKVLPDGMRIRGDINVLLLGDPGTAKSQLLKFVEKVAPISIYTSGKGSSAAGLTASVIKDPTTRELYLEGGAMVLADGGVVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAG 174          
BLAST of Gcaud74.t1 vs. uniprot
Match: F0ZGS3_DICPU (DNA replication licensing factor MCM5 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZGS3_DICPU)

HSP 1 Score: 213 bits (543), Expect = 4.400e-62
Identity = 110/149 (73.83%), Postives = 125/149 (83.89%), Query Frame = 0
Query:    5 SRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMRTMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIKDKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIAKAG 153
            SRHPNL Q+IA SIAP I GHE IK++I+ Q FG +  K LPD MR  GDIN+LLLGDP TAKSQ+L F E+VAPI VYTSGKGSSAAGLTA VI++ + GE++LEGGAMV+ADGG+VCIDE DKM L DRVAIHEAMEQQTISIAKAG
Sbjct:  315 SRHPNLRQVIANSIAPFIYGHEDIKRSISCQLFGGSA-KCLPDKMRLRGDINILLLGDPGTAKSQLLKFVEKVAPISVYTSGKGSSAAGLTASVIREPSTGEYYLEGGAMVVADGGVVCIDEFDKMDLDDRVAIHEAMEQQTISIAKAG 462          
The following BLAST results are available for this feature:
BLAST of Gcaud74.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM51_9FLOR3.630e-8088.89DNA replication licensing factor MCM5 n=1 Tax=Grac... [more]
R7QT75_CHOCR2.200e-7786.93DNA replication licensing factor MCM5 n=1 Tax=Chon... [more]
UPI001E1D8AF61.130e-7684.97LOW QUALITY PROTEIN: DNA replication licensing fac... [more]
A0A1X6NPI0_PORUM7.530e-6875.82DNA replication licensing factor MCM5 (Fragment) n... [more]
M2XST7_GALSU6.910e-6779.08DNA replication licensing factor MCM5 n=1 Tax=Gald... [more]
M1V4M8_CYAM15.270e-6575.16DNA replication licensing factor MCM5 n=2 Tax=cell... [more]
A0A7J7IKA3_9RHOD1.510e-6375.16DNA replication licensing factor MCM5 n=1 Tax=Cyan... [more]
A0A7S0H5B0_9EUKA1.410e-6272.67DNA replication licensing factor MCM5 n=1 Tax=Amor... [more]
A0A1R1XIC6_9FUNG1.850e-6272.55DNA replication licensing factor MCM5 n=1 Tax=Smit... [more]
F0ZGS3_DICPU4.400e-6273.83DNA replication licensing factor MCM5 n=1 Tax=Dict... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001208MCM domainPRINTSPR01657MCMFAMILYcoord: 52..67
score: 65.79
coord: 140..153
score: 85.02
coord: 112..126
score: 74.27
IPR001208MCM domainPFAMPF00493MCMcoord: 3..153
e-value: 3.2E-61
score: 206.3
IPR001208MCM domainPROSITEPS50051MCM_2coord: 10..153
score: 57.85479
IPR031327Mini-chromosome maintenance proteinSMARTSM00350mcmcoord: 1..177
e-value: 4.6E-12
score: -171.7
IPR031327Mini-chromosome maintenance proteinPANTHERPTHR11630DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBERcoord: 4..155
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..165
e-value: 8.2E-64
score: 217.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_670_length_19947_cov_4.237409contigNODE_670_length_19947_cov_4.237409:14844..15377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud74.t1Gcaud74.t1Gracilaria caudata M_176_S67 malemRNANODE_670_length_19947_cov_4.237409 14844..15377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud74.t1 ID=Gcaud74.t1|Name=Gcaud74.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=178bp
MLSISRHPNLEQIIARSIAPEIVGHEHIKKAIAAQFFGRALDKTLPDGMR
TMGDINVLLLGDPTTAKSQMLNFAERVAPIFVYTSGKGSSAAGLTARVIK
DKAHGEFHLEGGAMVLADGGLVCIDELDKMRLQDRVAIHEAMEQQTISIA
KAGGVHVHESFLTHSIQVCASDNVGRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001208MCM_dom
IPR031327MCM
IPR027417P-loop_NTPase